Special

FBgn0040918 @ dm6

Biotype
protein_coding
Gene Symbol
schlank
Description
The gene schlank is referred to in FlyBase by the symbol Dmelschlank (CG3576, FBgn0040918). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is X:6257668..6267228. Its molecular function is described by: N-acyltransferase activity; DNA binding; sphingosine N-acyltransferase activity. It is involved in the biological process described with: SREBP signaling pathway; triglyceride metabolic process; negative regulation of lipid catabolic process; positive regulation of lipid biosynthetic process; ceramide biosynthetic process. 30 alleles are reported. The phenotypes of these alleles manifest in: prothoracic gland; terminal bouton; wing; endosome; trichogen cell. The phenotypic classes of alleles include: visible; lethal; increased mortality during development; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed at stages throughout embryogenesis, during late larval stages, during early pupal stages.
Coordinates
chrX:6257668-6267228:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
286
chrX:6266718-6267003
-
70.09
50.69
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000090661 CERS4 1-to-5
Human hg38 ENSG00000139624 CERS5 1-to-5
Human hg38 ENSG00000143418 CERS2 1-to-5
Human hg38 ENSG00000154227 CERS3 1-to-5
Human hg38 ENSG00000172292 CERS6 1-to-5
Human hg19 ENSG00000090661 LASS4 1-to-5
Human hg19 ENSG00000139624 LASS5 1-to-5
Human hg19 ENSG00000143418 LASS2 1-to-5
Human hg19 ENSG00000154227 LASS3 1-to-5
Human hg19 ENSG00000172292 LASS6 1-to-5
Mouse mm10 ENSMUSG00000008206 Cers4 1-to-5
Mouse mm10 ENSMUSG00000015714 Cers2 1-to-5
Mouse mm10 ENSMUSG00000023021 Cers5 1-to-5
Mouse mm10 ENSMUSG00000027035 Cers6 1-to-5
Mouse mm10 ENSMUSG00000030510 Cers3 1-to-5
Mouse mm9 ENSMUSG00000008206 Lass4 1-to-5
Mouse mm9 ENSMUSG00000015714 Lass2 1-to-5
Mouse mm9 ENSMUSG00000023021 Lass5 1-to-5
Mouse mm9 ENSMUSG00000027035 Lass6 1-to-5
Mouse mm9 ENSMUSG00000030510 Lass3 1-to-5
Rat rn6 ENSRNOG00000001072 Cers4 1-to-5
Rat rn6 ENSRNOG00000013823 Cers3 1-to-5
Rat rn6 ENSRNOG00000021138 Cers2 1-to-5
Rat rn6 ENSRNOG00000024595 Cers6 1-to-5
Rat rn6 ENSRNOG00000052990 Cers5 1-to-5
Cow bosTau6 ENSBTAG00000000099 CERS2 1-to-5
Cow bosTau6 ENSBTAG00000003434 CERS4 1-to-5
Cow bosTau6 ENSBTAG00000006987 LASS3 1-to-5
Cow bosTau6 ENSBTAG00000017395 LASS5 1-to-5
Cow bosTau6 ENSBTAG00000044179 CERS6 1-to-5
Chicken galGal4 ENSGALG00000000406 1-to-6
Chicken galGal4 ENSGALG00000010902 CERS6 1-to-6
Chicken galGal3 ENSGALG00000000406 F1NRZ0_CHICK 1-to-6
Chicken galGal3 ENSGALG00000010902 E1C4X9_CHICK 1-to-6
Zebrafish danRer10 ENSDARG00000013704 cers2a 1-to-8
Zebrafish danRer10 ENSDARG00000018619 cers4b 1-to-8
Zebrafish danRer10 ENSDARG00000031387 cers4a 1-to-8
Zebrafish danRer10 ENSDARG00000036337 cers3b 1-to-8
Zebrafish danRer10 ENSDARG00000058992 cers2b 1-to-8