Special

FBgn0050443 @ dm6

Biotype
protein_coding
Gene Symbol
Opbp
Description
The gene Optix-binding protein is referred to in FlyBase by the symbol DmelOpbp (CG30443, FBgn0050443). It is a protein_coding_gene from Dmel. It has 2 annotated transcripts and 2 polypeptides (1 unique). Gene sequence location is 2R:6653217..6655267. Its molecular function is described by: DNA-binding transcription factor activity, RNA polymerase II-specific; sequence-specific DNA binding; RNA polymerase II regulatory region sequence-specific DNA binding. It is involved in the biological process described with: regulation of transcription by RNA polymerase II. 9 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: viable; fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes.
Coordinates
chr2R:6653217-6655267:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
54
chr2R:6654510-6654563
+
2.49
76.34
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Zebrafish danRer10 ENSDARG00000089875 si:ch211-226o13.2 1-to-4
Zebrafish danRer10 ENSDARG00000096120 si:ch73-266f23.3 1-to-4
Zebrafish danRer10 ENSDARG00000102090 CABZ01021453.1 1-to-4
Zebrafish danRer10 ENSDARG00000102749 CABZ01021450.3 1-to-4