FBgn0052423 @ dm6
Biotype
protein_coding
Gene Symbol
shep
Description
The gene alan shepard is referred to in FlyBase by the symbol Dmelshep (CG32423, FBgn0052423). It is a protein_coding_gene from Dmel. It has 9 annotated transcripts and 9 polypeptides (6 unique). Gene sequence location is 3L:5155821..5277944. Its molecular function is described by: RNA binding; mRNA binding. It is involved in the biological process described with 7 unique terms, many of which group under: response to gravity; response to abiotic stimulus; response to stimulus; anatomical structure development; behavior. 65 alleles are reported. The phenotypes of these alleles manifest in: cellular anatomical entity; appendage; adult segment; adult tagma; nervous system. The phenotypic classes of alleles include: increased mortality during development; increased mortality; phenotype; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in adult female stages.
Coordinates
chr3L:5155821-5277944:-
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000076067 | RBMS2 | 1-to-5 |
| Human | hg38 | ENSG00000144642 | RBMS3 | 1-to-5 |
| Human | hg38 | ENSG00000153250 | RBMS1 | 1-to-5 |
| Human | hg38 | ENSG00000184388 | PABPC1L2B | 1-to-5 |
| Human | hg38 | ENSG00000186288 | PABPC1L2A | 1-to-5 |
| Human | hg19 | ENSG00000076067 | RBMS2 | 1-to-5 |
| Human | hg19 | ENSG00000144642 | RBMS3 | 1-to-5 |
| Human | hg19 | ENSG00000153250 | RBMS1 | 1-to-5 |
| Human | hg19 | ENSG00000184388 | PABPC1L2B | 1-to-5 |
| Human | hg19 | ENSG00000186288 | PABPC1L2A | 1-to-5 |
| Mouse | mm10 | ENSMUSG00000026970 | Rbms1 | 1-to-3 |
| Mouse | mm10 | ENSMUSG00000039607 | Rbms3 | 1-to-3 |
| Mouse | mm10 | ENSMUSG00000040043 | Rbms2 | 1-to-3 |
| Mouse | mm9 | ENSMUSG00000026970 | Rbms1 | 1-to-3 |
| Mouse | mm9 | ENSMUSG00000039607 | Rbms3 | 1-to-3 |
| Mouse | mm9 | ENSMUSG00000040043 | Rbms2 | 1-to-3 |
| Rat | rn6 | ENSRNOG00000003076 | Rbms2 | 1-to-3 |
| Rat | rn6 | ENSRNOG00000008482 | Rbms1 | 1-to-3 |
| Rat | rn6 | ENSRNOG00000025881 | Rbms3 | 1-to-3 |
| Cow | bosTau6 | ENSBTAG00000005180 | RBMS1 | 1-to-5 |
| Cow | bosTau6 | ENSBTAG00000017830 | RBMS2 | 1-to-5 |
| Cow | bosTau6 | ENSBTAG00000044062 | RBMS3 | 1-to-5 |
| Cow | bosTau6 | ENSBTAG00000045694 | 1-to-5 | |
| Cow | bosTau6 | ENSBTAG00000046678 | 1-to-5 | |
| Chicken | galGal4 | ENSGALG00000011132 | RBMS1 | 1-to-4 |
| Chicken | galGal4 | ENSGALG00000011439 | 1-to-4 | |
| Chicken | galGal3 | ENSGALG00000011132 | O73664_CHICK | 1-to-4 |
| Chicken | galGal3 | ENSGALG00000011439 | RBMS3 | 1-to-4 |
| Zebrafish | danRer10 | ENSDARG00000044179 | rbms2a | 1-to-5 |
| Zebrafish | danRer10 | ENSDARG00000044574 | rbms3 | 1-to-5 |
| Zebrafish | danRer10 | ENSDARG00000056150 | rbms2b | 1-to-5 |
| Zebrafish | danRer10 | ENSDARG00000074023 | rbms1a | 1-to-5 |
| Zebrafish | danRer10 | ENSDARG00000103823 | RBMS1 (2 of 2) | 1-to-5 |