Special

FBgn0053087 @ dm6

Biotype
protein_coding
Gene Symbol
LRP1
Description
The gene LDL receptor protein 1 is referred to in FlyBase by the symbol DmelLRP1 (CG33087, FBgn0053087). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is 2R:8174165..8226438. Its molecular function is described by: calcium ion binding. The biological processes in which it is involved are not known. 20 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: viable; fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, during early pupal stages.
Coordinates
chr2R:8174165-8226438:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
78
chr2R:8186905-8186982
+
14.68
74.9
0
Exon Skipping
123
chr2R:8209714-8209836
+
98.52
28.35
0
Intron Retention
67
chr2R:8223544-8223610
+
2.13
76.74
0
Intron Retention
2765
chr2R:8206741-8209505
+
75.19
74.44
0
Intron Retention
88
chr2R:8209626-8209713
+
8.39
80.33
0
Intron Retention
248
chr2R:8209837-8210084
+
9.92
90.24
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000123384 LRP1 1-to-2
Human hg38 ENSG00000168702 LRP1B 1-to-2
Human hg19 ENSG00000123384 AC137834.1 1-to-2
Human hg19 ENSG00000168702 LRP1B 1-to-2
Mouse mm10 ENSMUSG00000040249 Lrp1 1-to-2
Mouse mm10 ENSMUSG00000049252 Lrp1b 1-to-2
Mouse mm9 ENSMUSG00000040249 Lrp1 1-to-2
Mouse mm9 ENSMUSG00000049252 Lrp1b 1-to-2
Rat rn6 ENSRNOG00000025053 Lrp1 1-to-2
Rat rn6 ENSRNOG00000030243 AABR07051892.1 1-to-2
Cow bosTau6 ENSBTAG00000010830 LRP1 1-to-2
Cow bosTau6 ENSBTAG00000024632 LRP1B 1-to-2
Chicken galGal4 ENSGALG00000012407 LRP1B 1-to-2
Chicken galGal3 ENSGALG00000012407 LRP1B 1-to-2
Zebrafish danRer10 ENSDARG00000029146 lrp1ab 1-to-3
Zebrafish danRer10 ENSDARG00000061517 lrp1bb 1-to-3
Zebrafish danRer10 ENSDARG00000097827 LRP1 (2 of 2) 1-to-3