Special

FBgn0261617 @ dm6

Biotype
protein_coding
Gene Symbol
nej
Description
The gene nejire is referred to in FlyBase by the symbol Dmel ej (CG15319, FBgn0261617). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (3 unique). Gene sequence location is X:9665442..9687066. Its molecular function is described by 10 unique terms, many of which group under: binding; protein binding; transferase activity, transferring acyl groups; transferase activity, transferring acyl groups other than amino-acyl groups; transcription factor binding. It is involved in the biological process described with 26 unique terms, many of which group under: positive regulation of signaling; behavior; transport; response to temperature stimulus; macromolecule biosynthetic process. 63 alleles are reported. The phenotypes of these alleles manifest in: cellular anatomical entity; epithelial tube; cell projection; intracellular; neuromuscular junction. The phenotypic classes of alleles include: partially lethal; majority die during P-stage; increased mortality during development; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 and 18-24 hour embryonic stages.
Coordinates
chrX:9665442-9687066:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
9.56
65.26
0
Alternative 3'ss
30
chrX:9674895-9674924
-
90.44
65.26
0
Alternative 5'ss
111
chrX:9685550-9685660
-
14.75
64.77
0
Alternative 5'ss
158
chrX:9685503-9685660
-
82.45
68.49
0
Intron Retention
1351
chrX:9684152-9685502
-
19.58
68.75
0
Intron Retention
1587
chrX:9674925-9676511
-
8.01
67.59
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000005339 CREBBP 1-to-2
Human hg38 ENSG00000100393 EP300 1-to-2
Human hg19 ENSG00000005339 CREBBP 1-to-2
Human hg19 ENSG00000100393 EP300 1-to-2
Mouse mm10 ENSMUSG00000022521 Crebbp 1-to-2
Mouse mm10 ENSMUSG00000055024 Ep300 1-to-2
Mouse mm9 ENSMUSG00000022521 Crebbp 1-to-2
Mouse mm9 ENSMUSG00000055024 Ep300 1-to-2
Rat rn6 ENSRNOG00000000190 AABR07058539.1 1-to-2
Rat rn6 ENSRNOG00000005330 Crebbp 1-to-2
Cow bosTau6 ENSBTAG00000016198 EP300 1-to-2
Cow bosTau6 ENSBTAG00000026403 CREBBP 1-to-2
Chicken galGal4 ENSGALG00000007762 CREBBP 1-to-2
Chicken galGal4 ENSGALG00000011992 EP300 1-to-2
Chicken galGal3 ENSGALG00000007762 CREBBP 1-to-2
Chicken galGal3 ENSGALG00000011992 EP300 1-to-2
Zebrafish danRer10 ENSDARG00000061108 ep300b 1-to-4
Zebrafish danRer10 ENSDARG00000100666 ep300a 1-to-4
Zebrafish danRer10 ENSDARG00000104148 crebbpb 1-to-4
Zebrafish danRer10 ENSDARG00000104609 crebbpa 1-to-4