View source for VastDB v1.2 release

{{Post
|Title=New release of event functions (v2)
|Body=__NOTOC__


VastDB has just been updated to version v2!

===RELEASE NOTES FOR VERSION 2:===

In this version, '''we have extended our set of annotated AS event functions to a total of 601 entries'''. All functions come from published references from PubMed, and, as a new source, we have also included functions derived from '''linear motifs in the [http://elm.eu.org/ ELM database]'''. The total amount of functions for human almost triplicates the number in our previous release, and the number of functions in mouse is over 200.

 [[File:Functions v1.2 byspecies.png|center]]

Our annotations are not strongly clustered by gene, as many genes only have one annotated function (taking into account all events in the gene). However, we do have three genes ([[Gene:ENSG00000136717@Genome:hg19|BIN1]], [[Gene:ENSG00000132639@Genome:hg19|SNAP25]] and [[Gene:ENSG00000171105@Genome:hg19|INSR]]) gather 10 or more functions each.

 [[File:Functions v1.2 bygene.png|center]]

As for individual events, only one event ([[Event:HsaEX0031843@Genome:hg19|HsaEX0031843]], in the [[Gene:ENSG00000171105@Genome:hg19|INSR]] gene) gathers more than 10 functions (13, actually). The majority of events have only one or two functions each.

 [[File:Functions v1.2 byevent.png|center]]

Thank you to all the users that contributed to this new release of functions. If you know a published function for your favourite AS event, remember that '''we are always looking forward to hearing about new annotations!''' Fill the form in our [[EventFunction|submissions section]] and we will review it for our next release.


Happy VastDBing,

The VastDB team
|Summary=
|Category=News
|Tag=VastDB, Releases
|Publication_date=2018/09/03 1:30:00 PM
|Author=Webadmin
|FileBlog=
|Approval=Yes
}}
Post Approval	true +
Post Author	Webadmin +
Post Publication date	13:30:00, 3 September 2018 +
Post Tag	VastDB + and Releases +
Post Title	New release of event functions (v2) +