BtaINT0032416 @ bosTau6
Intron Retention
Gene
ENSBTAG00000008723 | CCBE1
Description
collagen and calcium binding EGF domains 1 [Source:HGNC Symbol;Acc:HGNC:29426]
Coordinates
chr24:58901204-58912244:-
Coord C1 exon
chr24:58912092-58912244
Coord A exon
chr24:58901311-58912091
Coord C2 exon
chr24:58901204-58901310
Length
10781 bp
Sequences
Splice sites
5' ss Seq
CTGGTGAGT
5' ss Score
10.1
3' ss Seq
GAGTCCGTCTCTCCCTGCAGGGC
3' ss Score
10.94
Exon sequences
Seq C1 exon
ATATCGATGAATGCGCCACGAGCAACGAGACGCTGTGCGCGCACATCTGCGTCAACACCGTGGGCAGCTACCGCTGTGAGTGCCGGGAGGGCTACGTCCAAGAGGAAGACGGCAGGACGTGCACCAAGGAAGACAAGTACCCCAATGACACTG
Seq A exon
GTGAGTAGGCGAGAGGGGCACCCCGTAGTGGTGGGCGGGCGTGGATGGAGGATGGATGGATAGGTGGATGGGTGAACGGGTGGATGGATGGACGGAAGGATGGATGATGGGTGGACGGACGGACGGGTGGGTGGATGGACGGACGGACGGACGGACGGACGGGTGGATGGATGGATGGACGGATGGATGGGTGGGTGGGTGGATGGATGGATGGAAGGATGGATGGATGGACGGACGGACAGACGGGTGGGTGGATGGGTGGATGGACGGACGGACAGACGGGTGGGTGGATGGATGGATGGATGGAGGGATGGATGGATGGATGGACAAATGGACGGATGGACGGACGGGTGGATGGATGGATGGACGGATGGACGGATGGATGGACAGGTGGATGGATGGATGGATGGATGGACGGATGGACGGACGGGTGGGTGGATGGATGGATGGACAGATGGATGGATGGACAGGTGGATGGGTGGGTGGGGGTGTAGATGGATGGATGGACAGATGGATGGATGGACAGATGGATGGATGGAGGGATGGATGGATAGATGGATGGATAGGTGGGTGGGTGGATGGGCAGGCAGGCACTTGGGAACCCACAAGTTTCCTCCGGAAGCTACAGACAGGACATGGCATGTGTGTGAATAGCAGGTGGGATCTGGGTGAGAGAAAGAACAGAAGGGCACACCCCTGGGGACCCAGTGAACCGCGGTGCCTGTTGGCCACAAGGCTCACGAGCTGCTCGTGAACCGGGAGAAGCTCAGCACCCAGCACAGAGGGGGCGTGCTCATGGACATATGGGCAGGACTCAGGGACCAGCTAAGACCAAACCAGGAGGGACAGCGATGAGGCCAGATGCACTGGGTTCCCCCAAGGAAAACGAACGGGCTGAATAAAAACACGAAACGCTTCTGGGTGAGGCAGCAGTCCACCTCGGTGCCGCCGAAAGCAGAGCCTGGGGCCCCATGCCTGCGCGTGAGCCGTTACTTGGTTCACGATCAGGTGAAAAACAGAAATGGAGAGCATGGAGAACCGTTTTCTAGTTGTTCATTTTTATTGCCTTTAGTATGCCCAGTGGAGGCCTTTTAGGCGCTGACCTTTCTTCAGAGAGTTTGAGCAACTCATTTGTATTCTTTTGACTGGATTCAGCTGAGACGTCTGATGGCTTAGGGATGTGATCCACCTGAGTGTCGGTCACTGCCTTCTGTAAGCGGTGGGGGAGGCCTTTCAGGACCGTATCCAACCCCGGTAGGCCCCGAAGCTGCTGGCATCTCCCTGAGCTCAGGGCCCAGCTTCGCCCCCTCAGGAGGGGAGAGAGGCAGGAACACTTCTCTCTTTGGAGAGATCAGCTGGACCTGGGCAGTCTCCAGACGGGGAGGAGGCTCCTAGGGCAAATGATCTGATCCAAGAACTGCAGGGAGAGGAAGGGACCGGGGCTGCTGGGAGCTCAGCAGGTAGTGCTTCTCCCATGTAACCTGATATTCTAAAAAGGGTGGACACTGTGGCCATCAGCCAGGGACAGCCAACAGCTGGGGACCAGCTGCGGGGCACAGAAAAACTACAAAGCCAACCCTGAGAGCAGCTGGGGTGAGTCATGAACAAGCCGCCGTCTATCAGGAATAACGTGAAATGTCTGCATGCAGTCAGCGCAGGGGTGGGCAATGGGGATGGTTGGACTCGATCAGAGGGCTCAGTGTGACGCTTTCTAAAGCCTGAAACATGGGGGGCCAAGGTGCCCAGAGGTGCGGAAAAGCAGGGGCTCACAGTCTTTTGAGCATCAGGGTTGAGAAAAGATTTTTGCCCCCACAAAGAATCTGCCTGCAATGCGGAAGACCTGGGTTCAGTCCCTGGGTTTGGAAGATCCCCTGGAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCTGGAGAATCCCATGGACTCTATAGTCCATGGAGTCGCAAAGAGTCGGACACAACTGAGCAACTTTCACTTTACTTTACTTCCAGTGAATACTCAGGGTTGATTTCCTTTGGGGCTTCCCTGGTGGCTCAGATGGTAAAGCGTCTGCCTGCAATGCTGCAGACCCAGGTTCGATCCCTGAGTCAGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCTAATATTCTTGCCTGGAGAATCCCATGGACAGAGGAGCCTGGTAGGCTACCGTCCATGGGATCACAAAGAGTCGGACACGACTGAGCAACTTTACATACTTACTTACTTTTTTAAAATTAGCACTTGGAATTAAAATCCTTTTTGTCCCATGGTGGAGAAGGTTTGGGGGAGGAGAATCGTCCACTTACCTCTTAGGTTATGTTCCTCATTGAAAGGAAGGATCTCACTGGAAAAAGAAAAAGTGAAACACGAGGTACACCTTGCCACTGGTGTTGTGTGTAGGCTGACCCGAGACTCAGCAAGAGGAAAGACGCTTTCTAAATGTTCGTCTTGGAAATGGATTTATAGCTGTGCTCCGAGCCAGGGAGCCCATGGGCTTGGGCTGTTGTTGTTCAGTCGCTAAGTCATGTCCCACTCTTTGCGACCCCATGGACTGCAGCACGCCAGGCCTCCGTGTCCATCATCAACTCCCAGAGCCTGCTCAAACGCATGTCCATTGAGTCGATGATGCCATCCAACCATCTCATCCTCTCTCACCCCTTCTCCTCCCGCCTTCAATCTTTGCCAGCATCAGGGTCTTTTCCAGTGAGTTGGCTCTTTGCATCCAGTGGCCAAAGTATTGGAGCTTCAGTCCTTCCAGAGAGTATTCAGGGTTGAGGGGTCCTCAACCGGGTAACCCTGTTGTGTCTTTGTGTCCCATTTCTATTCAAATGAAGTCCTGTTTACCTGGGTGTAAGGGCAGCATTGAGCAACCCAGTCTAGAGAGAACCAGCAGAGCGGGCAGCGACAACCGCTGAGTGGGGTTAGAGGCTAAGGATCTCCAAACAGCAGGACCTGAGCCATCTGTGAGCACTGCCCAGCTGGGGGTGGGGGGTGGGGTGGGGTAGCATGGTCTGCCCAGAGACCCGACCTTACCTAGCAGAGACTAGAGGCGTCGGATGGAATTTCCGGAGCCTAGGCAAGATTTTAGACTCTGAATCGACTTGTTCTTTGGTCTCGGGTGGCCTCCGCCTCTTGCACTAATTCTTAGCTTCCTTGTCCTCATCCCTCTAAAGCTACCCTGTCCAGGGATGGGTCTGAGCCAGAGGTGGTGACAGGCTGGACTGTGATGGGAGGCCCTCACCTCCAGCCTTGCTTGTGGGCAAGGTGGACTCTGAGAGGGGCTCAGCCCAAGGGCCAGGGGATGGGAAGGTCTCACTGCAGCTTTGAAATTAAGTCTCTTGTGCTGAATTGGTCCTGTGACCACACTCCTGTTTCCTTTCCTGAAAGATGAATTGCACTTTTTAAAAAATATGCAAACATACACGAAGTTTCGGTACAAGAGATCAAGAATTTAAGTGATGACCAGTCAGACTTCTAAAGCTGAGAATTCAATTAAAAAAAAAAATCGGGGAGGTCTTAAGTACTGATTGGTTTTGCACCTTCTCTACTGTTACTTTCATTTAAAGACTATTTTACCAACCATTTATTGCACCATTTTTCCACATTGTCTTCCATAGGGCTTTGTGGTCCTGGGAGATATCAATAAGCCTTTCTTTGTTTGAAAGGTTCTGTGTTCAGATGTTCAAGGAGAATGTATTTACTGCTTGCTTCTGCAGGATTCATGATATGAGTGTATTAAATGCCCAGATCTTGCCATTCAAGGAGTTCCCTGTAGCTCAGACAGTAAAGAATCCGCCTGCAATGCAGGAGACCCGGGTTCAGTCCCTGTGTTGGGAAAATCCCATGGAGGGAGAGCATGGCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCATGGACAGAGGAACCTGGTGGGCTATATCCACAGTGTCACAAAGAGTCGGACATGACTGAGCGACTCACACACACGTGTGCCATTAAAAAATGTTAATTTTGATTAAACCTGTACTCCCCGAAATTATTTTCTGAAGACACACTCATAAGCATCTCACAAATGGCAGTGTCCTGAAAGATAGTTTGGAAAATTCTAACGTATTAGCATCAAAGAGCTGAGCCCTGGGGCCCAAAGTTGACAGGTCATCTGGTCGACTTTCAGGCAAGGATGCTGTCACCGCCAGGTGAAGCAGCCACAGTCCGAGGGTGGGCGGCGGGGAGCTGTGGGCTGCAGATCACGGGACCTCTCCTGGGTGAGAGCAGGCTGACGCTCGTCCGTCCCGCCCTGCAGAGAGGCAGTCATTCCTGCTCAGCGGACTGGGCCCGTCCGTTTCGTCAGGAAGAGCGGGCTCGTGGTGGAACAGCCCAGCTCCCTGCACAGCTGAGCCTGGGCTTTGAATGCTCTCTGTCCTCCCTCCTCTGCTTCCTCCAAGCATCACAGCTACAAAGAGCTGGACCGTTCCAGTTTTTAAAACTACCTGTGGTATCCCACTGCCTGCCCCCGGCAGCCGCATGCTGGAAGGATCTCTCCATATTTCATTTTCAGTGACTCGTCTCTACTGAATTCACCACATAGTCACAGAGGACTCATGGTTGGTTTTCATGTTTTACTGAGAAAAACGTTCTAATGCAGGTAACCAAGGACATCAAGGGTAGGAGCTGAGAGGAGTAATTCATCCCCATAATTAAAATTATGGGAAAGGACGGGCACATTCTATGCCCTGAACGTTAGAATCATTACTTACACACTGGGCCCCTGAGGAGGTGGGAGCTTTGATGATTCAGGCAACAAGAAGTGAGTGTTCTGGATTCACCTCTTCAGCAGCTGTGATGCAGCGGCAAGTTCCCCTTGGCTTGGGAGTCAGGAGAGCTGGTAGTCAGAGCATCTGTAGTGTCTACCAGCTGGATGTCACTGCACAGGCAGCTCTCCCGACCTCAGTTTCCTCCTCTGTAGACACAAGGGGGTTGGGCTAGGTGAGCGCTGAAGACCCTTTTACCATCACAAATCTTTTTCACAATTTGATGTGATTTAGACAAAGATCCATATACTCAAAGCTATGGTTTTTCCAGTAGTCATGTACTGATGCGAGAGTTGGACTTAAAGAAGGCTGAGCACCACAGAATTGATGCTTTCAAACTGTGATGCTAGACAAGACCCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGATATCAGTCCTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAGGCTCCACTACCCTGGCCACCTGATGTGAACAGCTGATTTGTTGGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAAGAGGAAAAGGGGACAACAGGGGATGAGATGGTTGGATGGCATCACTGACCCAATGGACATGAGTTCAAGCAAACTCCGGGAGCTAGTGAAGGACAGGGAAGCCTGGCATGGTGCAGTCCATGGGGATGAAAAGAGTTGGATACAACTGAGTGACTCAACAACAAAGTGTCAGTGGAAATAACTTAAGCCCTGCCAGCCCCATGAGTCCCTGAGCGGCTTTTGTTTCTTTGTGCTTTTATCTAAGTGAGTTCGAAAGGCATGCCTGGCCTCAGCACCTTCTAAACCCAGAACTTTGTCCTACAGTGTCTAAAAGATGAAGAATTATCATCCAGATATTTAGGGGTAAGGAAAGTTAGGAGCCAGACCAGCCCCGCATGTGGGACACCAGAGGCTGCTGCGCAGTTTCATCCGTTTGGGACTAATTCTTAAGCCCATATTTCATCACAGTCATTTTTCTTTTGAAGAAGAGATAATGATGGAGTGTAAACACGTGTGATCTAAATCCCTCTTCCAAAATCCACCCCCTTCCCCCCGCTTTTTCTTTAAACTTTGCGTTGTCTGCCATCTGTAATGTTAGAAGAGTTTTAAATCGACCACAGCCTCAGGTCATTCTTCAGGAAGTGCGTAGACAGCAGAAGGGCTGGCCTTCGAATGGCCTCTGCTCACGGCAGGGTGGTCGTGTGCCCACGAGCGTCAGGACGCCAGCATCTGGCCAGTAGGCAGGAAGAGCACACTCCGCCAGTTTGATCTTTGTCTCTTTTCAAATATGCGTCTGGAGCCAGTGACGTCACCGCCAGGACATCTGTGGTCCCGATGCAGAGACAAGGACGTGCTGGCTCCATCGTAATTAGCTTGCTGGTCTCTCTTTTTCAACTTCTGTTTTGTTTTTGTTTTTTTCCCCTGATAAAGTGACCTTGACCCCCAACATCACTTATTACAGGGACAGCCAGGTGTTTCATATAACTTTCAGGCTCCACTAATCCATAGATCAGCCATTCTCAACCTGAGGAGCTTTCAAAGGCTGATGCTATTCCCTTTCTGTGACCCCCTTATGGGTGGGGTGCAATATGGTCTTCAGGAATTTTAAACAGCTCCCCACCACCACCCTAGATGGTTGCAATGTGCCACCAGAATTGACTACCCACCAGGCACAAATCTTCAGTCAGCTTTTAAAACCATATGTGTTTGGTGACTCTGCCTGTATAAAACATGTTGAGACCATCCTTTAGTTTTTCCAAGTTTGTTAAATATTACTAATATGGTATCTCAGGAATTCTGTTTATAATGCTTGCGATGTACAGCTCCCCTCAACTTCAGTAAAAATTAGAGCTACACGCCCCCCTGTGGCTTGTCGATGATACTGCACCTTTGAAATCTGAAGGCGTTGGAACAGGGTAAGGGATGGCTCTCTTAATGTGGTCGTGGTCACACGCATGACCCCATCATTAATGGAGAGTCAGAGATGTCTACCCACATTTCTAAAAGAATTACTAATGTACCCTGCGTGGGATTTTCTTAGCTCCGCATCTTACTGTATCCTGCATTAGAATAGGATACATGAGCTCCGATTCAGGATAGATTGCATGTTCTGCATCTGCACACACCATTATCTTCAGACCCTCTGGAAGCTCCTTCCAAAGGATGATGCAAAGAGCCTTCCCTTGATCTGTAATTTTGCAGGATTAATAAACGACGATAGCCAACCATGACAAGGATACTAACATTTCTTGGGTGCTTGCCGTTTACCAGGCACTGCTCTGGTGTCTTACAGGAGTCGTCTCAGTGCCTCGTGGCACCCACAGGTGACGGCTGTTTTACCGATCCAGGAAGGGATGGTCGCAGAAGCTGTGACTTAGAGTCAGTGGCAGGATTCGAGCCCTGATAAGCCTCCACTCCTTACTCTGCTCCTCTGTGACTGTGGGAGCTTCCAGAGGCTTTGGGACAAAGTTGCCCTTGTTCTCTGAGTTTTGATAACTCCAAAGAGGGACAGGGAACAGGCCAGGGATTTCCAGGTGAGCCGTCGTTCGGCAGAGCTGTTTCCCTGCAGCGGTGATGCTGAACTCACAGGTGCTTCAGAGTCACTTGGAGACTTGGATGGAAAGTCTCCACCACCAGGCCACACTCCCAGGATCCGGGCTCCCTCGGAACCCATATGCTGCTGCTGTCGCTGGCCTAGTGGTCACACGTGAGCCCACCTGGCAGGCTGCCCTCGGTGTCCTGGGCAGAACCCCCAGGAGCGCCCACCACAGACCCTGTAAGTGCTTGCCCTCTGCACACGTCTTCCTGGGAAACCTAACCCAGATGGCAGCCCTTCTGTGCATCTTACTTTCCTCATCTGTAAAGGAGGTTGAACTAAAGATGCATCAATTCTAACATTCCACGATCTGAATGAAATAGCGTCCAGAGCCTGGTAAAGAGGTTTATTATTGAGAAAATATCAAGTGGCCTTAATCACACCAATACTCGATAAGTTTAGCTGAGTGTATAAAAACAGAAATGGACAGATGGGCTTTTAACCCTTGTTTGTGATGGGCCGGTTCTGCCAGCAGGGCTGGTTCCTTAAAAGGAAAGTTGATCTCAAATTGTTGAACAGGTATCCTCATTTATTTTACACTGTCGGCACCTCATATGGGGCTTGGTAAATAGCAGATTTTCCATAACTGATGAGAGAGAGATGGATGGATGGATGGATGCACAGATAAACGGATGAGAGGTAAGTGAGCGGGGAGATGGGATGGATGAGACTGATAGATGTGTTATCGGATGGGACAGCATATACTGACCAGTAGATGGGTTGAAAGGGATGAATGCTCACTTGGGAGACCTGGATGTCCTCCAGCTGCCCTAAACCTAACAAACCTGGGCTTCCTGTGCACAAGTCCACCATCCTTTGGCATCGGCACAACCAAAGGTGGGTAAGGCTTCAGTCCTTTACCACCAAGCGTCTTCTTGCATGAAAATTCCATCCCATCCTTATTATGCTGGAGATGGATCTAAACTAGTTCTCCTCCACGTTCAAGCTATGTGTGTTCAAGCTCCATAGGCAAGTGGACTTGTAAATGGTACAGTAAAAGGCAACAAAGAGTCTAAAGGGAAGTGCCTGATTTGGGCTCAGAGTCAGGAAATCTCAGTTCTAAACCCAAATCAGTTAATGACTTGCTGGATAACTTTCCTGACATCACCAAACCTTAGTTTTCCCTCATTCTGTTGTTCGTGTTAATCCCAGAATCCTTGCCAGTTTTATCAGGCAAAGGGAATTCAGAAGAGCTTGGTGGGCCTGAAGCCTCTGCCAGACACCCTCTCCTGTCTACTGGAACCCAGCCTTGTGCCAAGGATTTAATAGCCGTCACCCCAGTTCATCCTCACAATAGGCCTGGGTCATAGGAATTCCAGTATCATGGTTGAAGAAATTTGGGCTCATAGTGGTGAGATCACTTCCTTGAGGTCCCTGAGCTAGTGACGGCACTGGGGTGTGCAACCCTATGCTGACTGAGGAGGTCGTGCCCTTAACCGGCATTTCACCAGCTCCACTTCACCTCCTCCAGGTGAAGACTTTTTCACAGCTCGTCGTGACACAGCTGTGACGTGAATGGAACCAGTCTCCCGCGGGTATCAACTGAGTGGGGGCGGGGGAAGCTCCTGGTGGGACGGAATGAGCCTAGAAGATGGGGATGAGCAAGCAGCCTGGTTATATCGCACACACAAAGGATTTAGAAAGAGGCTGCCTTGGTAAAGAACCCACCTGCAATGCAGGAGACCCCAGGTTCAATCCCTGGGTTGGGAAGATCCGCTGGAGAAGGGATAGGCTACCCACTGCAGTATTCTTGGGCTTCCCTTGGTGGCTCAGCTGGTAAAGAATCCGCCTGCAATGCGGGAGACCTGGATTCGACATCCCTGGGTTAGGAAGATCCCCTGGAGAAGGCAAAGGCTGCCCACTCCAGTATTCTGGCCTGGAGAATTCCGTGGACTGTATGGGGTCGCAAAGAGTCAGACACACTGCGCGACTTTCATTCTGTTGCCTTTCTCCCAGAGGTTCAAGTGCTTCACCCAGTCAATGCTGAGACAGAGCTTCAGGCTGTGTATTCAGGCATCATGGTGTTGCTTACGGCCACTCAGCAAGACTGAGAGCCGCTTCCCCCGCCTCTGCCTGCTGGCTTAAGAAGTGGGTTCCCAGCGTGTGTCCTCTAAGCCTCAGGCCTCCCACGCAGCACGGGGGGTGCATTTGGCCAATGAGCTCTGAACATGCTCTACCTTCCACCCTGCGCTGCTGCTGTGGGTCTGAGAACTCAGCTGCCAAGTTGCCCTCAGGCATCCTCCCCTCCCAGAGAGTGTCTCCCAGACGAGCTGTCTCGGTTGTGGAGGCTAAGTGTCTGGGATCACGGTGTCTGTGGGGTTGCACCCTTATGAGGGCTCTGATGGAGAATGTTCCAGGTCTCTCTTCCAGCTACTGGTGGGTTTCCAGAAGTTTTTTTCCCAGAAGGAAAGGGCTTTATTTTTATCTCTTACCATAGCTTTACAAGCAAGTTTTGTTTTTTCTTTGGTTGGAGTATAGTTTGGGTTTCCTAGGTGGCACTAGAATAAGGAACTCTCTTGCCAACGCAGGAGATGTAAGAGACGCGAGTTCGATCCCTGATTTGGGAAGATCCCCTGGAGGAGGCCATGGCTACCCACTCCAGTATTCTTGCCTGGAGAATCCTCATGGACAGCAAAGCCTGGTGGGCTACAGTCCACGAGATTGCAAAGAGTCAGAGACGACTGAGTGACCAAGCCACACAGCATGAAGGCTGTGTAGATACTGGGTCGTGTCGCTGTTTGGCATTTCCTTAGAGAAACGTGATTTTTCAGAAAGCACGGCACTCCCGTGCTCTGTGGGACAGCACTGGGACCTGCCCGGGGCCTGTCTCATTTGGCCCTGGATTGGCATGCCCAGGGCGCCTGGCACTTCTTCCACTGATGTTCCTTCTCAGAGTCCAGCCCTGGTCTGGGGCGCCGCCTAGCCTGGCTGCGCTCTCTTTGAACAGCTGGATCATCAGAAGTGATCCAGTCCAGCTTTGTGAGCACTGCCCTGAATCCTGTCGCCTGGGCTTGGGGGATGATTTATGGCTTGTGAATATCAGCCCTTAGAGGGACTGTAAGTCGTGTTGGGTTGCTAGAGCCTGCCTCATGGTAAAAGGGCCACGGCTCACTTTTTCACACGTGGAAGAGGAAGGTGCTAGGGTGACTAAGTGGAAACAGCTGAGCCTAGAGTGTGAGGGGGTCCCCTCTGCTGACCCCGTGACCCAGGCATGCCATCAGCGACCCAAGAGCTATAAAATCACCCGCCTCCATCCCTTGCGGATTTTGGCATCAGCCGGCCCACCTGGGACCACCCTGCCTGATGTGGTCTCCTGGGGGCTGGATGCCCGCAGCCTTGCAGGCAGACTCGAGTCCGTCTCTCCCTGCAG
Seq C2 exon
GGCACGACGACGAGAAGGTGGAGAACGCGGTCCGAGCCGCCACCTGCTGTGCCACGTGCAAGGAGTTGCACCAGGTGAAGCAGACGGTGCTGCAGCTGAAGCAGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000008723:ENSBTAT00000011491:3
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.192 A=NA C2=0.333
Domain overlap (PFAM):
C1:
PF0764510=EGF_CA=WD(100=78.8)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]