BtaINT0046217 @ bosTau6
Intron Retention
Gene
ENSBTAG00000012972 | CYP2U1
Description
cytochrome P450, family 2, subfamily U, polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:20582]
Coordinates
chr6:18519267-18533033:-
Coord C1 exon
chr6:18532480-18533033
Coord A exon
chr6:18519903-18532479
Coord C2 exon
chr6:18519267-18519902
Length
12577 bp
Sequences
Splice sites
5' ss Seq
AGGGTGAGC
5' ss Score
7.75
3' ss Seq
TCCTGGGTTTCTTTTTGCAGGGA
3' ss Score
10
Exon sequences
Seq C1 exon
ACCAGTGTCTGGGAGACTCTCGTGGGGTCTGCGGCAAGAGGCTGCGGACACCGGTGCACAGGCCATGGCCTCCCCCGGGCTTCCCCAGCCCCCCACCGAGGACGCGGCCTGGCCTCTGCGCCTCCTGCACGCGCCCCCGGGGCTGCTGCGGCTGGACCCCACGGGCGGCGCGCTGCTGCTGCTCGTCCTCGCCGCGCTGCTGGGCTGGAGCTGGCTGTGGCGGCTCCCGGAGCGGGGCATCCCCCCCGGGCCCGCGCCCTGGCCCGTGGTGGGCAACTTCGGCTTCGTGCTGCTGCCGCGTTTTCTCCGAAGGAAGAGCTGGCCGTATCGCCGAGCGAGAAACGGAGGAATGAATGCCTCGGGCCAGGGCGTGCAGTTGCTCCTGGCCGACCTGGGCCGTGTGTACGGCAACATCTTTAGCTTCTTCATCGGCCACTACCTGGTGGTGGTCCTCAACGACTTCCACAGCGTGCGGGAGGCGCTGGTGCAGCAGGCCGAGGTCTTCAGCGACCGCCCGCGGGTGCCGCTGACCTCCATCATGACCAAGGGAAAGG
Seq A exon
GTGAGCTGGGCCGCGCCTCGGGGTCACGGGCCCTGTGAACGCGCGGCTGGGGCTGCAGGTGCGCAGAGGCTGTGGGTTCTGTGCCCCTGAGGCCGCGCACCTGGCCCGCCGCGCACCTGCATCCGGAGGTGGAGGGAGGCGCTCCTTCCACTCCCGGATCCCGTCCATCCAGCTGGGATAGGCTCCATCCGCCCCAGGAGTATTCACTCCTTCCCAGAACGGGGCCTCACTCTTCAGGCTGTGTTCCCGACGAGGAACTTTGGCCTGGTTAAAAAGAGAGAGGGATATTTACACCGTTGGCCTTCTGAGTGCAAGAATTTAATGTGATTATTTTCCCATAGGATAGGAGCCAACTGACAAACCTAATACATCAGGTTCAGAGCCTCTCTGATTCCTGCTTATGGAAGTCTGAGTTGGGCAGTTTTGAGGGTTGGTAAACATCTTATCTGCTGCAGTCGAATATCACAGTTGCCCTTTATTTATCAGTGTTCCCTCTGTTGTATTGGCCGGCACGGGTCCCAGACTATTTTTCCATCTGTGCCAATCCTATCCTTAACTCAGATGTTAATTTCAATGTCTTTGCTGCAGGGAGTTTTTTTTTTTTTTTTCCTCACTTCTGCAGCAGGTAAGTTAGGCTCCCTTGTTAGAACTTGTTTAATTGCAAAAGTACTTTTCTTCGCTATCAGTCCTGAGGCTTCAGGATTTTCTAACCTTGGGCCCAAAGTTGTGTCTTCACCACTAGACTGACATCCAGGAGGACAGAGTAATTCCTCGTCCTTCCTGGCGTGCAGTAGCGCAGTAGTGTAGTGTGTGTGTGCTCAGTCGTGTCTGACTCTTGGCGACCCCATGGACTGTAGCCCACCAGGCTCCTCTGTCCCTGGAATTTTTCAGATAAGAACGCTGGAGTGGGCTGCCATTCCCTTCTCCAGGGAATCTCCTGACCCAGGGGTTGAACACCTTGTCTCTTGCATCTCCTACATTGGCAGGCAAATACTTCACCATTGTGCCACCTGGAAGTAGGAGCCAGTAACTGTTAAGTAAATGAACTGCTGCTTCCCCTTCTTGGAATGTGGCATAAAGAGATTCAGGCTTTTTAGACCCTGATTAAGCCAGATTTTTGCATCAGGATTTTAAATGAATAGTAAAGACGATCTTAATATTTTAATGTTTAAAACATTAATTTTGATATTACTGAAAAACAAATTACACATGTCATAGTCCACACCTCACCCTCTGCACGCCTTCACACAGGCTGCTGCTTCTACCTGGAATTCTCTTCCGATCTCATGGCCACCTGGAGAACTTCTGCCTGCTTTTCTTCTCTCTCTCTCTCTCTTTTTTAATGAGGTGAAGTACAGATAGCATAAAATTTACCATCTTAATCATTTTTAAGCATACAGTTCAGCGTCATTAAGTCAATAACATTGTGAAAGTATCTCCGCTATCTCTAGAACCCTCTTCATCTTTCAAAACTGGAACTTCATACCCATTAAATAAACACTAAACACCCACGAAACATTAAAGTCTCTAACCTCTGGCAACCATCATTCTATTTTCCATCCTAGGTAATTTATTTAAGTGGAATCATGCAGTATTTATCTTTTTGTGACGGATACATTTCACCTCATACAATGTTTTAAGGGTCATCCATCTTGTGGCACGTGTGAGGATTTTCTTCCTTTTAAGAGTGACTGCTGTTCCATTTAACATTTGCACTGCACTTTGTTTATCCATTCCTCCTTGATGGACTATTGGGTACTTCTGTCTTTAGATTATTGTGAAAAATGCTGCTGTGAACATGGTGTATCCACAAATAACCGCTCAAAGTGCTGCTGTCAGTTCTTCTGGGTGTAAATCCAGAAATGGAATTGCTTGATCATAGGGAACTCTATGTTTAATTTTTGAGTGACTGCCATACCATTTTCCATAGCAGCTGCGCCATTTTACATTCCTACCAGCAATGGCCCACATTCCTACCCGCAACGGCCAACATTCCAGTTTCTCCACATCCTCACCAATACTTGCGCTCTGTTTCCCCATACCTGCTTCAATGTCTCCTCTCTGAGGCTGTGTTCTATGACATATTTCTCTACCCTCCCAGGCAGAGGTTCGATACTCTTTTCTCTGTGATACCACTGTTTTCAGTTAAACTCTCATCCCATTCCCTATCAGTCAATAAGTCTCATCAGTTCCTACTGCAGATACATCCATGTGCTGTATCCATTCACTTTTACCCATCTCCAGCTTATCCAAGCTACAGTCAGTTCTCATCTCTTACTGCAGAAACCTCTTAACTAGCCTGCTTGCTTCTGTCCAATCATTCATATATACAGCAATCAAAGGGATCTCTTAAAAGAAAAACAAAAAACTACGAATCAGAACAAATCATGTCACTCTGCCACTGAAACCAATTGCTTCTGACCCCGTTCTGTACCCTAAAGGGTCTGGCGTCTGTTTGCCTTTTGGACTTTATGTTTTTCTACTCATACCTTCCTTGTACATTTCAAGTACAGTGTCTGCTCTGGACACACTAAGCTGCTTCCTGGCAAGTTGGTGACTGCTTCAGGCTACTGGGTTTTGTTATCCTTGGGCCTGGAATAACTTTGTACTTGGCTGACTCTTTATCATCTCTTAAGTCAAGTGTCACCTTTCACTTCTAGTTTAGACACTGTCCAATATCATAACTGAATCTCATTCATATTTCACCAAACTCATTCATTGAACATTTTGAAAGCATTTAGCCTATTACCAACCCCACCTCCCTCCAGAACGTGACCTCTGTGAGGGTAAAGACTTAGGTCATTTTAACCACTGCACCCCCACTAATTGGCACAGAGTAAGTAGTCAAGAAATGAATGAATGCATGCACCAAGCACCTACTGCTGTACTGACCACATTGTATTGTCACTTTTGTTGCTTGTCTGTCTTTTCCTCCTGATTTTTTAAAGGTAAGAATTAGATTTTCTTTGTTGAGGTCCTTCTTGGTGGATGTATAGTTTGGTCAATAATCCATAATAAGGAAGGTGGTTTTTTTTTTAATTGGAAGATAATTGCTTTACAATTCTGTGCTGGTTTCTGCCATACATCAACATGAATCAGTCACAGGCTCCCCCTTAAACCTCCCTCCTATCTGCCCCCTCGTCCTACCCCTCTAGACTGTCACAGAGCCCTGGGCTGAGCTCCATGTGTCAGCAGCGAATCCCCACCGGCTCTGTTTTGCATATGGTAGCGTGTGTGTTTCCATGCTGCTCTCTCCATGCGTCCCCCTTCCCCCACTGTGTCCACAAGCTTGTCCTCTGTGTCTGTGTCCACTGCTGCCCTGCAGATAGGCTCATCAGCACCGTCTTTCCAGATGCCATCAGATCAGATCAGTCGCTCAGTCGTGTCCGACTCTTTGCGACCCCGTGAATCGCAGCACGCCAGGCCTCCCTGTCCATCGCCAACTCCCGGAGTTCACTGAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTTCCCTTCTCCCCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCACATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCAGTCCTTCCAAAGAACACCCAGGGCTGATCTCCTTCAAAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCGGTGCTCAGCTTTCTTCACAGTCCAACTCTCACATCCATACATGACCACAGGAAAAACCATAGCCTTGACTAGACGAACCTTTGTTGGCAAAGTAATGTCATATACATGCGTTAATATACAATGTTTGTCTTTCTCCTTCTGACTCACTCACTCTGTACAATAGGCTCTGTCTCTTGGAGGAATTAATACTTTAAGTGAAGCACCAAATTATCCCTGGCTCTCAAGACTTCCCTAAATAAGGAGGGATCNAANANCNNGNTGNGATCTCTCTATACTTAAAAACTGGCTTATTANATATAATAATGTATTTATTATACATAAATATATTGTAAGGCATTTATTATTATACATAATAAGGTAGTTATATATAATGCAGTTATTATTACATATATAAGGTAGTTGTTATATATAACAAGGCAGTTTTTAAGTATTAGTTGGATCACAGTTTGTTATTAGATCCCTCCTTATGGGGAAAGTCTTGGGTGCCCAGGATAATTTGCTGCTGCAGTGTCTGACCTAAAAGTATTAATTCCCCCAAGACACAGCTAGGACTTCTCAGGTGATGCTGCTCTGGTGTTCTGGTGGATGTATGTTGGGCAAATGTGCTGGAAGAAATTTCTGTTGCTAGTGAAGGTGATTGACAGGAGAAGGTAAAGCAAGAACCATATGTAACAAGGGAAATGCTTATGGATTTTACTTGGAATAAACAATAGGCCATCTGCACAGGAAAATGTAGATAGTCAAGGAATCTTTTAATGGAATTGTTTCAAAGGTGAAGAATAAAATGGGAGAAGGTAAATTTATCTCAAGATGACCATCAAGGGATAAAGGAGCAGATGAGTTCTGGGTTGACTTCATAGATCTAGAAGTGGATGGCATGGTCAGCTTGAAGGAGATTGGCCACAGGAGTGAAAGGCTGAGAGACTCAGCAAGATTTGAGGAATGCCCAGGCATTCCTCACTCCCTGCTCACTCCCTTCAGTGTCATTTCCAACAGAAACATTATAAAATGTGAAAATGTAAAATATAAAAGCCAGAAGGAGGATGTGTAGGCTATAAGAGAAGGTGATATTAGGAACTGGAGACCAATAGTGTTATTAAATGTTTCTTACAAGAAATTGTTTTTAAAGAATTTTGCTACTAAAGTGGGTGAGACTAGCAGAGAAGGAATGTTTCATGAACAGTGATGTGCTAGAAATTGTTCACTTAACACATTGTCAACGAGTTCTAGCATGTAGGAAAGTTATTTGAGTTTTTCAAATGATTGTGCTTAGACAAGTTGATGTTGTTTTTAAACATAAAAACTATAGTCAGCTAGATAGGCCATAAAGATGTTCTACGTTAGCTATGCCCATCAAACCTATTGATCCATCTGATTCTGTTCCTGAGCAGGAATAGTTAATAAAGCTACAAAGTCAAGTTAAGAGGTACACACTACTAGGTATGAAATGAATAAGCTACAAGGGTATATTGTACATTACAAGGAATATAGCCAATATTAATAATAATGTTAAATGGAGTATATTTTAAAAATACAGACTCATCTTGTATACCTGAAACTAATTTTGTATACCTGAAATTAATATAATATTGTAAATCAACTGTACTTCAAATAAAAGAAGTTTATTAAGTCAGAGCCAAGTCTACCCAAGAAGTACTTTACTTACCAGAATGGCATAGTTTGAAAACCTCAAGGCAAAACTAATAAATGTAAATTATTCCAAAGTGGTATCACCATGGAATACCTGACTGAAACACTTGAGTCCTTCGGCATTTTTCAGGTTATAACTAGAGAATAGAGGGTTTTAGAAGGGCTTTTCTCTGTAGTGGTGAAAATGGGAGAATGGGCATCTCAGGGTAGCTCCTGATTCTTGGAGAAGCTGGTTCACAGTAAGAAAGAAGAAAGGCAGGCAGGCAGAAAGAAGTGAAAGGGGGTGCGGAGAGAAGGAGTTCTGTGATGTTTAGTCCTCTCTGAGGTGGTGACACCCAGCTCTTTCTGCTTTTTTATTCCGTCCACAGCCTACTTGGCCTTTTTGCCAAACTAGCTTGAGGGTATGTTTTGTCATTTCCAAACCAGAGTCCTGATTTTGCTTTGCAGTCATTTTTATTTTTCAGTGGTTTTTATCCCCTTGAGATGAAGTCTTTGTAGACAACCATTGTATACATAAGAAAATAGTGTGAAGTCACTCAGTCGTGTCCAGCTCTTTGCGATCCTGTGGACTGTAGGCCACCAGGCTCCTCTGTCCATGGGATTTCCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCTGACCCAGGGATCAAACCTGGGTCTCCCTCATTGCAGGCAGATGCTTTAACCTCTGAGCCACCAATGTCAAAAAAAAAAAAAAAGAAAAAAAAAGAATGGAGGTGTCAACAATTGGAAGATGTGCCTGAACCTCTTCCAAACACTCTAAGACTCTAAGCCATTCTGGCTTCCCGACCAGGGTATTTTACAAGGTTTGAAACCCTGATGCCATGAATTCTGTCCATGCCTCTCATCCCTGACATTCTCAGACACTGTCTCCTTGGACACCTCTTACGTCTTGCACTTCATATCTGTCGAAGTGAAAGTGTTAGTCTCTCAGTTGTGTCCGACTTTTGCAACCCCATGGACTGTAGCCTGCCAGGCTCCTCTGTCCCTGGAATTCTCCAGGTAAGAATACTGGAGTGGGTTGCCATTTCCTACTCCAGGGGATCTTCCTGACCCAGGGATCAAACCCAGGTCTCCTGCATGTGAGGCAGATTCTTTACCATCTGAGCTACTGGGGAAGTCCTCATATCTGTCAAGTTGCTGTCAATACCCAATGCCCAAGGACCAGCCTCTCTTGAGAGGGTTCCCTCCTTTTCCCCACCTTATCTAAACCTGAATTTTTCCCTAAAGATAAACCAGCCCCTTTTTAACTTTCCCCAAGTTCTTTATTTTTCTAAAATGTGCCTTCATATACATCCTTATTTACAAATGAAGTATCACCCAGATGTCCTGTCTGAGAAGTACTGCTTTCACTCAGCTGACAGGGTGCTCTTTCCCTTGTCTACACTGAAACCTCAGTAGCCTCCAACATACAACATTTAATACAATGTATCCCAACAACGGAACATTCCGTATAGTCCAACATACAGCGTTCAATCCTGTACAGCCCAACAATGCAACACTCAATACCATACATACCACTTATGCAACTTTAGTGCAACCCACCAGACAACATTTCAATATGCTATGCAACTTCAGTAGAGTCCAGCATAAAACAGTAGAGTTGTTGATTTATCCAGTTCCTCAAAAAAACTGAAAGCATCTCGAGAACAGTGACTGTGTCTTTTAAATCCATATGCCCTTAGTAGCTGGCACATAGGGGACTCTAAATAAATATTGGAAAAACTAATAGAGGGCATTTTGCTAGATAAAATGTTTCTAAAATCCAAATGTATGGATTTAAAGATAAGTTTAAAGGTGAGAGTTTGAAAGATGATGAGTAGGTGACACAGACTGAAGACCTAACAAAAGAATAAAATCCCTTGAGAAATAGGACAGACCAGAGATGTCATATGTGACAATGTGACATCTTAAATTAGATGGCAGTTAAAATTAGGATAAAATCCTGAAGTTAGAGTGAGAGACCATATCTTTCCAAGGAAAGAGAAGGGAGCCCAATAACACAGCCTCTGAATGCTGACAGCAGCAAAAGATTGGGCATGGTTCAAGACAGGAAGTGTGATTAAGCTGTGGTTCCCTAGAAAATAGTTTATGGGGGTTTAGTAAACAAAGAGAGTCTAGTTTCAGGGGTAGTTAATAAATTTTTATTCCTTCTTGAAAATCACACACTACACCAGAGGAACTTTTCACAGAAGCACCTACCCCATCCATGATGAAATGTTCCTATAACCCCGTACCACAACATCTGAAGACAAAAAACGGAGACAGGATTGGCAGATGACTTCAGAGAGTGGTGGGTGACCACCCTTAGGTTTCTGCAGGGGGAGGTACTAATGGAGTGTGGTCCAGTTCTTCCTAAGGAATCCCAGAAAGGCTCAGGAATCGGAGGTACCAGTGATTGCAGGAGATAGGGATGAGCCAGAGAGCTGAAAATAGCAATTGCTAGAAGTGCATATAAACTGTAGTTAGACCAGTTCCTTATCACCACCACCTTCCCTGCAGAAAATAGATGCTTTTGAAGAGCTTTGGATTTTAGTGACCTCTTGGTCAGCCAGTGATTTGAAGTAGGGAGGGGAATGAGGGCAGAGAGAGATGACCTTGTACCATGCAAGATGAAAAGCCTGTGCACTGCACCTAGAGAGCAGCCCCCACTCGCCGCAACTAGAGACAGCCGGAGTGCAGCAACGAAGACCCAGTACAGCCCCAAAACGAACGAAAGAAAGAATAAGGAAGGCATTACATGATGATAACAGGAACCCTTTTTTTTTAACCAGGAAGATAAAATATTTCTAAATTTGAATGTAGCTGACAATGTTGTCTGGCATATACAACATAGATACATAAAATTTTTGTGTATTTTAATTATATATTTTAATTCTTACAATATATATATATATACACACAACAAAAACTTACATAATTGCAAAAAGAAATTGATAAGTACCATTAGAGCAAAATATTTTAACATAAGTATTTGAATAGTTGAGAGATCAGGCAGATAAAAACTTGGTAAGGATAAAGAAGATGTGATTCTAACAGTTAGCAGCTTTCTTTGTTGGGAAGGACCTTACAGTGGCAGGCTTGGTGTATTTTTACCTGTAGTGGATCATTTTTTAGTGCTCTCGTCCTTCATATGAAAAAAAGATTTAATAAGGTCATGTAACAATATGCAAAAATCACTATCTTTTCGGTTTCTTCTTTAGTTTCAAAGTGACAATTTTACAATGCTACATTTCAATTGTATTGGATACATGTATATGTGTGGCTGAGTCCCTTTGGCTGTTCACCTGAAATTATCACATTGTTCATTGGCCTGGTGTGCTGCGATTCATGGAGTCGCAAAGAGTCAGACATGACTGAGCGACTGAACTGAACTGATAACTCCAATATAAAATTAAAAGTTTTTTTTTAAATTTCAAAAAAAGAGGACCTTATACCCAACAATTGCTTATATAAAAATTCTTCCCTACTTTATTTGGAGATTTATTAAAATTGATCACATTCTAGACTAAAAAGCTAGCCTCATCGATGTAAAAAATCAGCATAAGCCAGTTAACCTAGGTGGCAAAAGAGAATAACAGAAGAAAAACTTTATGCTTCAAATGTATTGAAAAGACATGCAAACAATACTTGTGGACCGCAGCTTAAGTGGATCTCAAAGGCAACTGTAGAGCCTTGAAAAGTGAAAGTGTTAGTCTCTCAATAGTGTTGGACTCTTTGCAACTCCATGGACTGTAGCCCAAGGCTCCTCTGTCCATGGGATTCCCCACGCAAGAATACTGGAGTGGGTAGCCATTCCCCTCTCCAGGGGATCTTCCCAACCCAGGGGTGTCTCCTGCATTGGCATGCAGATTCTTTACACTGAGCCACCTGGGAAACCCTTGTAGAGCCTTCACTATCCTTTCTTAGGATAAAGGTCTGAAAACTAGTGGGCTACCCTGGTGGCTTAGTGATAAAGAATCTGCATGCTAATGCAGGAAACGTGGGTTTGATTACCCATGTTTCCATGCTAATGTAGGAAATGTGGGTCGGGAAGATCCCCTAGAGAAGGAAATGGCAATACACTCCAGTATTCTTGCCTGGGGAATCCCATGGACAGAGAAGCCTAGCGGGCTACAGTCCATGGGGTCCCAAAGAGTTGGGCACAACTTAGCAACTAAACAACAGCAACAATATACAAGAAAGCAGACTAGAAAACCTGTAATGGAGCTGCCGGCATACAGCAAATGTATGACAGAGGAAGTGGTGTAGATCAGTAGGGAAAAGGAGAAGCTGTTCCATTAATGGTGCTTGAATAACAGATTTTCAGAATAGGGGTAAAGTGGATTCCTTCTTCACAACAAGTAGGAATACCTACTGCTACTGCTGCTAAGTCGATTCAGTCGTGTCCGACTCTGTGCGACCCCATGGCAGCCCACCGGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCCGACTCTTTGAGACTCCATGGACTTCAGCCTACCAGGCTCCTTCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTTCAGGAATACCTAACATAAGTATAAACTCCAGGTAGGCTATAGAGACTTAAATGTCAAAAAGCAAAATGTTTTAATTTTACAAGAAAATAGTTGTATTTATGAACCTGTGGTAGGAAAAGATTTTTAAAATAAGATACACAGCACAAACCACTAAGAAAAGATTGGTAAATGCAACTACCTTCATATTTAAAACTAGTTTATCAAGTAGTAGCATGAAAACATGAAAAAAAGCAATTCACGTGGTGAAAGACAGTATCTGCTTTGCATGTAGAATATATAAGAAGAAGAAAATTGCACAGTTTATAAGCACAAATCACAGAATAGGAAACTTGGGCAAAAGCCATATGAGAAGCTGTTCCAACTCACTGTAACAGTCAGGGACATGCAAATAAAAATCAGATGAGATACATTTCAGCCCTCTGGCAAAAATAAAATGTCGATAACTGCCAAGTGATGGCAACTATTTGACAAGAGATCGTTAATATACTTCTGGTAGGCACACTTTTGGGGTCTTCTCCACTTTGGAGAGGAGTATGGCAGTATGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGAAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCTACAGTCAGACACGACTGAGTGACTTCACTTTCTCTTTTCACTTTCATGCATTGGAGGAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACCGGGAAGCCTGGTGGGCTGCCGTCTCTGGGGTCGCACAGAGTCGGACACGACTGACTCGACTTAGCAGCAGCAGTCACATTGAAGGTGTGTGTATTTTAGGACACATCAACATACTGTTAGCAATGTTTTCAAAATTCTGATGGAGGGGGAAAGGTACAATTAATACATGTGCTGAAAATCTTTAGAAAATCTGTCTCTGATGTATCCTTTCCCAGGAAACTACTAGAGGATAGGCTTCAACAAAATTCAGTAGTGAAAGAAGAAAAAGACATAGATTCCAGGGAAATGGGTTCAACATAGGAGGTCCAAAAAGATTTCTACGCTGTGCTGCAACACTTCAGTTGTGTTCAGTTCTTTTTGACCCCGTGGACTGTAGCCTGCCAGGCTCCTCTGTCCATGAGATTCTCCAGGCAAGAATATTGGAGTGGGTTGCCCTGCCCTCCTGCAGGGGATTTTCCCGCCCCAGGGATCAAACCCATGTCTCATTATGTCTCCTGCATTGGCAAGCAGGTTCTTTACCACTAGCACCACCTGGGAAACCCCTACAAAAATTTGTAGTTGATGACAAATGGGAGTCATAAAACACCTAAACAGAAGGCCTAGAAAGAATATCGTATTTGAGCAGATGTGTGGAAGATCCCGGTCAGGAATATGAACCTGATCATTCAAAACAGACCATATGGCTGTTTTTTTTTTTTTTTATTGAGAATCATTTTACATAGACAGACTTAACCACTGAGAGAGGTCTTTATTTCATTCTCAGCTGTATTCACAGCATCCCAGTGTCTGGTACATAGTAGGCATTCAGAAATATTCGTTAAGTGAATGAAGCATGTCCTTGAAGGTAGCAGGAATGAAGTAGATGAAAAATAGGAAGGAAGAAGAGCTGGCTGAAACAATAAAGCACACCATGGAAAAGAGGAGGATGAAATAAGTGACAGGAAGCAAAGAATATTTGAGAACAATTTGATACAAAATCTGAGAGCAATTCTGTTGGGGTTGATGGTGAAAGATGTATAACATAAGTGAGAATCAAATAAGCTGTGGTTGTGAATGTCCTAGAGTTCAGAGGCTTTTAAATTAGGGCTGTTTGCAACAACAGACATTTTAGATTACTTGCCCGTTCTTTGATCCAAGCTTTGGTGAGCACCGTTCTAATTCAGTTGGGTCATTCACGTATTCAGTGAATACTTAACAAGCTCCTCCTCTGTATGTAGCCCTATGTCAGAAGTTTGGATTTTAATGAGGAGCAAACTCAGATATTATCCCTGCCCTCATGTGCGCTCTGTTACTGTGCTTCTTGTGTTCATAATGTTTAGAATATGCATGTACCTAGCTTGAGATATTGGAGAAGGAAATGGCGACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTCGGACACGACTGAAGTCTGGGTTCACTTTAAGAAAATAAGATTTTGAAATTTAGGTAACTCTAGAAATCGAACCTTGTTTTCTCTTATTTCACCTGAAGTTATAATAATAAGCTTTTTAGCAAAGTTTTCTAGTGAAATTAGATATAATTTTTGTTATTAGAAACATACACTATCTGGATAACTAAATTTTGCCAGTCGTTCTTCTTGGCTGGTGGTCCTTATCTATACGTATATGAGCTTTGCACAAATGACTTGAGAAGTACAAGTCCACTTTATGGTTGGTCCTCTTCAGTGTTAATAATCAAGCTTCGCTGTCCCTCACCTTCTTTCCTGGGTTTCTTTTTGCAG
Seq C2 exon
GGATTGTATTTGCACATTATGGTCCAGTCTGGAGACAACAGAGGAAGTTCTCTCATTCAACTCTTCGTCATTTTGGCTTGGGAAAGCTTAGCTTGGAGCCCAAGATTATTGAGGAGTTCAGATATGTGAAAGAGGAAATGCAAAAGCACGGAGACGCCCCTTTCAATCCTTTCCCCATTGTCAACAACGCCGTCTCTAACATCATCTGCTCCTTGTGCTTTGGTCGGCGCTTTGATTACACTAATAGTGAATTTAAGCAAATGCTTAATTTTATGTCACGAGCATTAGAAGTTTGTCTGAACACCCAGCTCCTCCTGGTCAACATATGCTCCTGGCTTTATTACCTTCCTTTTGGACCATTTAAGGAATTAAGACAGATTGAAAAGGATTTAACCCTTTTCCTTAAAAAAATCATCAAAGATCATCGAGAGTCTTTGGATGTAGAGAACCCTCAGGACTTCATAGACATGTATCTTCTCCATGTGGAGGAGGAGAAGAAAAATAACAGCAATAGTGGGTTTGATGAAGATTACTTATTTTACATCATCGGCGATCTCTTCATTGCTGGCACTGATACCACAACTAACTCTTTGCTTTGGTGCCTCCTGTATATGTCACTGCACCCCAACATTCAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000012972:ENSBTAT00000017246:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.061 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0006717=p450=PU(15.8=43.3)
A:
NA
C2:
PF0006717=p450=FE(47.3=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]