BtaINT0078163 @ bosTau6
Intron Retention
Gene
ENSBTAG00000017060 | ITGB2
Description
Bos taurus integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) (ITGB2), mRNA. [Source:RefSeq mRNA;Acc:NM_175781]
Coordinates
chr1:145121402-145133581:-
Coord C1 exon
chr1:145133480-145133581
Coord A exon
chr1:145121463-145133479
Coord C2 exon
chr1:145121402-145121462
Length
12017 bp
Sequences
Splice sites
5' ss Seq
GGGGTGAGT
5' ss Score
7.93
3' ss Seq
ACTGCCCCTTCCCTCCTCAGGAC
3' ss Score
12.83
Exon sequences
Seq C1 exon
GTCTTCCCAGATCCGCGAAGCACCAGCCTGGTGAAGAGCAGAGCCGAAGCCCCTGCCAGTCCAGCTGGGACACCCCTGCCGAGGTCTCCAGGGCATCCAGGG
Seq A exon
GTGAGTGGACAGAGGCTCCTCTGTGTCCGGGCTAGCTTCTCTGAAGGGGAACTGCTCAGTCTTGAGGCCCCGGCTGCTGTCTTTCCCGAGGGAAGCAGCTCCGAGGAGCCCAGGCTGCGGGGGCCCTGGTGGCCCTGGTCGTCCGCTCCAGGCCCCTTGAGCTGAGACCCCACGAGGGGAAGCGCTGAGCCCACTGCTGCAGAGCTACTGGCTGCTGGGAGGCAGGTAACCAAGGGGATGGGGCCAGCATGGCGGAAGGATGCGCGCAGACCTCAGCCTCGGTCCCGCCGTGGGAGTCTCTCAACAAGGCCCAGGCGCTTGCTGAGCCCCTGATCTGGGGGCCACTAGGCCCCGCAGAGCCAGAAGGAGGCTGGAGGCAGGCCAGGCCCCTCTCGGGGGTACGGGGTCTGCGCGGCCGGGCTCTGAAGGAGGGTTCCCGGGCCTCCCCCTCCTCCCCCTGCCCCGTGCCCTCCTCTTCCTGCCCTGGTCTGTCCCCATCCTCTCTTCATGCTTCCACAGTTGGCCGGGCAGGTCTGTCCTCCAGCGAGCCCCTGTGTGTGTGTGTGGTGCCTCTGAGTGTATGTGTCTGTGTGTGTCTGTGTGTGCATGGTGCATTTTGTGTCTGTGTGTGTTTGTTCTGTGTGTGTGTCTGTGTGCATGTGGTACCTCTGAGTGTATGTGTCTCTGTGCGTATGTGTGTGTCCACAGTGCTTTGTGTGTGTCTGTCTGTGTGTGTATCCAGGTGCATTGTGTGTGTGTCTGTGTGTGTTTGTGTCCATGGTGCGTTGTGTTGAAGGCAGGTCTGCTTCTTCTCTCAGGGTCCAGAGGCTCATGAGTTCTGGCCTAATGATGTGAAAATGCGGGGAGACAGTTAAAGCTTTAGGCGGTCATTGGGTGTGTGACCTAAATCTCCCGCAACCAGGCCCTTGGAGGCCTGTCCCCTGGGAGTGTGGGGACAAGGGTCCAAGGACCCAGATGAGTTCAGGGAAAGGGGACTCCTGGCTGCCCTGGGATTTGTCCCGACGGGAGTAAATTGAGATATTTCCTGGGAGCTCGGCTGGCCAGGCAGCCAGACTCAGCCCCGCCGGCCTCGGGTTTCTCAGCTGAAATCTGCATGGACGTGCCTGCCCACAGCTGTTGGCTTGGACCAAGCCAGCGCAGCCCTGGGGCAGGTCACAGTCAGCTCCTGGAGGTTTCTGAGGGGAGATACCCCAGAAAGTCAGGGGCCTCTCAGAAGCTCAGCAGAGGGGGCGTCGCTGTCCAGGGGATGGGAGAGGCCCGCCCACACACTGGCCAAACGGGTGGGGCCAGGCTGGCTGCTCAGCCTCCATCTGTGAAATGGGCTAGTAGTTTGCACTCCAGCTGATGGTCTAATCGACTTGTGATTCGAAAACCACTTCCCTGGGAGGTGGCGATGTGGGCCTGTGGGCAAGGCTGGCCTTGTGTCCATAGGGCCCCACAAGTTCAGCTCAGGCCATGCCTGGCTGGTTACTGGACTGTGGAGAGGTTTTCACCCCGTGGGTGGGGCAGCGTGGAGCCCGAGGGGCCCCATGTGACTCTGGCCCCCCTGGTCTGGAAGGCATGTGGGGGTGGGGCCCGGTAGCCTGCACACCTGTCACTGTGCGTGTGTCCCTCAGTCCCTCTGGAGCCGACATCACGGGGGCAGCTACCAGACGCTAGTGACTAAGCCCCTGTGGGTGGTGGGGCCAGCTGAGAATGCCAGTTCTGGGAACAGTGAAGTCCCAGTGACACTGCAGGTGGGCGGGGCTGCAATGCTAATGTGGCCCCTGTCCATTTCCCTTTTCCCTAAACAAGACCTAAAATGGGCTGTAGGTCATCTCACCCAATCCCACCTGAGCCAGGAGCTGAGGTCTGAAGGAGGCACCACCCAAACCCCCTGCACCTACTGAGCAAGTGGCTGACAGGGTGGGGGGCCAAGCCCCAGGGGCCCTGGGATGCCAAGACCCACCTGTCCCAGCCATGCTGCCATCTGTCACCCCCCTGGCCTCTGGGGCCCTGTCCCTGGAATGGGGTCATGGTCAGGCTGATGAAGTCCATGTCCAGCTGCCGCAGTGGGCAGGGAACCTGGGCTGTTCAGAAAGAGCCATGTCCCCCGCCTTCCCCTCCCCCACCTCCCCTACCTTCCCCCACTCACCCCCTGACCCTGGGCAGGGCAGGCCGTGCGGACGGCAGCCCTAGGGCGGGCCTGGGGTCTCCAGTCGCTCCCACCACTGGTGAGTGGGCATCTTGGTGACGCAGCAGGTGCAGTTTGGTCCCCAAGCTGCCAATCTGTGACCCGGGCAGGCCTTCCTGCTTGTTCCAGGGTCCCCCACAATAGCTAGGGGTGTCCAGGCTGCTCACCGTCCCAGCAGTCGAGCAGCAGGGCTGGGGGTGCCAGGGAGCCAGCAGACTCAAGCTTCCACGTGAGCCCTGGCACGATCCCTGTTTAGCATGGCACCCCATGAGGCCAGGTCTGCAGCCGAGCACATGGACTCGGGGCTGGGGTGCCACCCCTGCAGGGCAGAGAGATGTGGGAGCCAGGCACCCTTGCCGCTTCTGAAACACACGGAGCAGGAAGGCACAGCTGTGCCCACCTACCTGGAGGTGCTGTCAAAAAATGCCAGCAGCTTTCCCTGAACCTGAGGTGCTTCTCCTGGGAGCTATGAAGTGTGGGCTCCCCAGAGAGACAGAGCCAACAGGACATGTGCACGTGTGTGTGTGTGTGTGTGTGTGTGTAAACATGTGCACGTGTTTGCATGTGTTTGTACAGAGAGACAGGTTGGTTTGGTGGAGCTGACCTGTGAAACTATGGAGGCTGACAGACCGCAAGTCTGCAGGACAGGCTGGAGAACCCGCAGAGAGCTGATGCTACAGCTGGAGTTCCAGGCTGTCCAGAGGCAGAGGTCTCTCCTCCTGGGGGACCCCATCTTTCCTTTAAGGCCTTCAACTGATTGGATGAGGCCCAACCACAGCATTGAGGGCAATCTGCTTTACCCAGAGTCCACTGATTCAACGTTGACTCCGTCTAAGAGACATCTTTGCAGCACATTCAGAGAAGAGTTTGAGCAAACATCTGGGTCCCTTGGGCCTGTGTACTTGGCGCATGAGACTCACGCTCACAGCACCCCTGGCTCTCTGTGACCGGGAGGAAACCGAGGTCCAGAATGGGAAGTCACTGTGACCTGTCCACAGTCACTTGGCACTGGGCATAGACTTAGGCATAGCAACCCTGGGGTCAGGTTGATGGGGGCCCCAGTCCTGGCATCTGTCCTGGCTGTGGGGCTTAGGGACCCTCAGAGCCACCATCCCTACCCCTGGGAGAATTGGAGCAGGTCTGGCCCCCCACCCCTAGGAATGGGAGCAGATCTGGTTCCCCCACCCCTGGGAATGGGGAGCAGGTCTGGTCCCCTACCCCTGGGGAGCAGGTCTGGTTCCCCCACCTCCGGGAATGGGGAGCAGGTCTGGCCTCCCCACGCCAGGGAGCTGCTGACGAATTGAGGCTGTGGGTGTCAGTGGCAGCCAGGCCCACAGGGAGGCTGCTGTGGGCATCACCCAGCCCTGGTCCTCTGGGACCTGGGGTCCTGAGTGACTGTCCAGGCAGGGACCACGCCCGCTGCCTGAGGCTCCCCCTGAAGACTGGCCGTGCCTGCCGTGGTCAGGTCGCTGTGGCCCAGGCCTTCACGGCCTCCGCCCTCTGCCCACGGGTCACCACAGAGCCCACAGTGTGGGGTCAGATTCCTGGGTGCTCAGATCTGGCCAGTCTGCAATGCAGAGACCTTCACACCCACGCGGCCTGATTCCACCACTCTGGAAGCTTCCAGGGGAGGGTCGTCCGGGGGAGTTGTGCCCTGGGCTATAGCTAGGAGTAGCTGGAAGTGTTCCCTGGCTGGATGAGGAGTAAGTCAGGGACTGAGGCCAGCTTCCTTGACGGGCGAGACCTCAGCAGGGCCAGGGCTCCTGCCTGAGGGGCCTCCCCAAGCATGGGGCACGGTCCTCTTCCAGTGCCCCGAGGGCGGGGACACACAGAACGGCAGCCCAGCGGGACCAGTGCTCCCACCCATCTGTGGTTTTACTTTGTAAACATGTTTATTCGTATCTGGTTACAAAAGACGAAAAGTAAACGCTTTATAGTTAGTTGCAAGTTGGAACCATTCAACAGTGTTCTGGAGGCCCTTGTTGAATATCTAGTGACGAAAATCCACCAATTCATTTTTTTTTTAATATTTATTTTTATTTTGCCGTGCCAGTTCTTAGTTGCAGCAAGCAAATTCTTAGTTGTGGCCTGTGGGATCTAGTTCCCTGACCAGGGATTGAACCCGGGCCCCCTGCACTGGGAGCACGAAGTCTTAGCCACTGGACCACCGGGGAAGTCCCCAGTTCATTTTATAAACAGCATGGATGTGGCTGTGCATTGGCTTTGCAGTGGTGAGGGTTTCAGGGTGATGGGAGTTTGGGGGAGGGACAGAGGTGTGGCACACCACAAGGGCTTGGCAGAAGTCAAAATCCTAGGATCGAGAACAGTGCCAGAGACCAGACAGGTAGCACTTGTTCCGAGAATGAGTGAATGAGTGACCGAGTTGGGAGCCGGCATCCCAGCAGAGAGTCACTTGCCCTCAGTCTGTGGACTGAGGACTGCCCTCTGTCCTCACTGGGGACAGAAAAACTGACCACTTTGGGAATCCAGAGATATTTTAAAGCAATGCATTGACCACCACAGAATTGAAATTTTCTTAAATGTATGAATTTTTAAAAAATCAGTTTATATGTTTATTGCAGCAGTTTGAAAAATACAAACTGGGATAATGAAGAAAATTGAAAACACTTACAATGCCGCCATCCAGCAGAAACGGCCTAGTTTGGTTATTGTTCACTTACTTTTTTTTCACACAGCAACATTTTATTGGAAAAATTGAGCTGGACTCACCGTTCACACATTTTCCCTCCGTGTAGGTTCCACTCGTGAGCATCACAGTTGTTAAAAACAGTGTCCAGCTTGATAACTAGACCAGGAATCTAGGTACTTTGATTGGAATACCTGATTATCATCCAGAGCAGCCTTTTCAAATGTTTGAGAACAAGTTTCATTTCTTCTCTTCTGCATTTTGTGTTTACAACAGACTTTTCTATGGGGTATTTGCCTTTTTGCTTTTATTCCTGAGATTTCCTTAGACACAAAAATTACCATTCACCTTCTGCATGAGACAAATACTGAATGTTTTCATCTACTCAATTTTTTATCTACAAACTTTGTTTTTAGAGTCAGTCTTCTTTTTTATTTAATTTGTTGAAGTGTAGTTGATTTACACTGATGCAGGTGCACAGAAAATTGATTCTGTATATATATATACATTCTTTTCCAGTTTCTTTTCTATTATGCGTGTGTACGGGCATGCTAAGTTGCTTCAGTCGTGTCCAGCCCTGTGCGACCCTATGGACCTTAGCTTGCCAGGCTTCTCTGTCCATGGGATTCTCCAGGCAACAATACTAAAGAGGGTTGCCATTTCCTTCTCCTTCCCATTATAGGTTATAGGTTATTACAGACATTGAATATGGTTCCCTTCCCTGTTCTCTACAGTAGGTCCTTCTTATTTATCTATTTTATATATAGTAGTGTGTAAATGTTTGGAGAAGGCAATGGCACCCTACCCTAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCCGCGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCTTGGAGAATCCCAGGGATGTCGGAGCCTGGTGGGCTGCCATCTATGGGGTCGCACAGAGTCGGACATGACTGAAGTGACTTAGCAGCAGCAACAGTGTGTAAATGTTAATCCCAAACTCCTAATTTATCCTTTCCCACTCTCTCCCCTTTGGTAACCAGAAGTTTGTTTTCTATGTCTGTGAATATGTTTCTGTTTTGTAAATTAATTCATTTGTACCAATTTTCAGATTCTACATATAAGTGATATGATATCATTTCATATCATTTGTCTTTCTCTTTTTGACTTACTTCATTCAAATGACAGTCTCTAGGTCTATCCATATTGCTGCAAATGGCATTATATCATGCTTTTTACAGCTGAGTAATGTTGTTGTTCAGTCACTCATTCGGGTCTGATTCTTTCTGACCCCATGGACTGCAGCACAACAGGCTTCCCTGTCCTTCACCATCTCCCGGAGCTTGCTCAAACTCATGTTCGTTGAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCATCCCCTTCCCCTCCTGCCTTCTATCTTTCTCAGCTTCAGGGTCTTTCTTAATGAGTCAATTCTTCGGGTTAGATGGCCAAAGTATTGTAGCTTCAGCTTCAGCATCAGTCCTTCCAATGAATATTCAGGCTTGATTTCCTTTAGGATTGACTGGTTGGATCTCCTTGCAGTCCAAGGGGCTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCAGCATTTCTTCAGCTCTCAGCCTTCTTGATGGTCCAACTCTTACATGCATACATGACCACTGGAAAACCCATAGCTTTGACCATATGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTTAATACGCTGTCTAGGTTGGTCATAGCTTTTCTTCCAAGGAGCAACTGTCTTTCAATTTCATGGCTGCAGTCACCATCTGCAGTGATTTTGGAGCCCAAGAAAATAAAGTCTGTCACTGTTTCTATTGTTTCCCCATCTATATGCCATGAAGTGATGGGACTGGATACCATGATCTTAGTTTTTTGAATGTTTTTTTAAGCCAGCTTTTTCACTCTCCTCTTTCACCTTCATCAAGAGGCTCTTTAGTTCTTCTTCGATTTCTGCCATAAGGGTGATATCATCTGCATATCTGAGGTTATTGACATTTCTCCAGGCAAACTTTTCTCCTGGCTGAGTAATATTCCATCATATATATATACCAAATCTTCTTTGTCCATTCCTCTATTGATGGACATTTAGGTCGCTTCCATGTCCTGGCTACTGTAAACAGCACTGCAATAAACAACTGGGATGTGTCTTTTCAAATTAGGGTTTTCGTCTCAGAGTCTATCTTCTAACAGCTTCTCCCTTAGTTTTTATGCTCAGCATCCTTACTCTGAAATACGCAGTCTCTCATTCCTTTAATCGTTTCATTTCCTGCACCTGGGCTGACCTGGCCCGTGATGTGAAGGGGGCGCATCTCCCCAGGAACGTGCTCTGCCCTGCACCTTCGAAGGCCAGAGTCCTGCTGCTCACTTCTCTCTCCTGGCCATTGGTCTGAGGTTCAGGGCGGCACCAACTCTGTCCCAAAGCTTCTAGATGAGTTTCAGAGGCCACTGCCCAGCTGGCAGCCACCTTGCCACTTCCCTTTCTAAGCTCCCTGGCACCTGCCACACACACTCTCTTCCAGATGAGACCTACTGGATTGCTTTTTCCAAAGAAATGGGTTTCGGTGTATTTATCAGTTTCAGCTTTTGCGTTTGTTTTCAGACTCTCCAGCTTCTTCTATTGTCTGTTTCCTCCCTCCCTCACCTTACTTCCTGAGCCCTTGGCTCTTTCTCTTGCCTCGAGCTCTCTGTCCTGCAGGTGTGCGTCATCACTCCTTTTCATCCGGCACAAAGCCACCCAGGCCCTTAGGCTTCTGTCTCTGCAGGGACAGAGGTTTTCACCATGTTGATCAGTGAGCACTGTGCGCTCTCCTTTCTGACGTGTCTGTAAACATTAAACTTGATTTCCTCTTGAACTCAAGTGATGTTGAGCAGAGTGCCTTAAAGGTTCCAATTAGCAACTGTGTGGGGGGGCATCAATTTTTTTTTCCATTTGGCCAGAAACTATGGCCCTGAAAATTTCTGCCATGGACAGTGAATTGAGCAGTGGTGAACGTGTATGGTGGGTTTTCACGGGCCTGAGAATGTGTGGGTTTGGAGAATCGGTGGGTGGTTTCCTCCTCTTCCCTGGTCTCTCTGAAACTCTAAGTCCTGGAGTGGAGGTGGGGGTTCAAGCCTCTGTTGCAATCTGCTTCTGTCCAATTCTTTCTTGTCTTTACATAAAGCAGGCACAACTACATCTTAACTTTGTCTTTTTGGTTTTAAAGGTTGATACCTGTTTAAAGGTTGATGTAAACACTTTTTCTACATGAAAGAGGCTTGAATCCTCACCTCCCAGGGTGCATCTGGACCCTGCCTTCTCCTCTTGTAACCTCCCCAGGGCGCTTCTGTTCCTCGTCACTTACTGGCCATGCCTCTGGGTTTATGGCAGGCTCTGATGGCAGTCAGAGGGGCCTCATCTAGGGGTCTGCACTTTGGCAGAGGCTTTGTCTTTGACAGGAAGCTGATCTGACATCAGCTCGCCCTGCCTCGGATGTGGGCCTCCCACTGCCTCTTGCTCAAACTTTTCTCCCTTTGTTGATGTTTCCTCTTTTTCTTGTCTTTTACCAAATATGAACTATGGGGTTTTGTGGCGTGTGTGGGGTTTGAAAGGAATAGATTCAGTTTTTCTTTTGAGTCTCAGTCCGTGAAGCTCAGAGCTCTGTCCACTGTGAAGGGTAATCCTCAGGGCACCCGGGGTCTCCAGATGAACCACTTCTGTGGCTGCACTCAGTTGCGCCAGCGCCCCCCTGCTGGGCAAGGGCAAGCTCAAGGGTGACTCTGATGCAAAATCCTTGCCAGTGGCAGTGGGTTGGGGGGTGGGGGTGGGGTGGGGGTGGCCTTGGGTTTCTGAACCTGCCTGGACTTGGGGTTTTGCACCTTGAGTCCTGGTGCTGGGCTGCCCTTTGATCTGAGGAGCGTGCAGTGCAGCCTTCAGGCTGGCACATCATCAGGGAGGCACCACACACCTGGGCTCGGGTGGCCGGCTGGAGCGCCTCCTCCTTGCTCTTGGACCAGCTGTCCCAGCTGAGTCAGCGCCCCAAGTACATGAGGGCTCTTCAAGCTGGTCCAGGCCTGCAAGCCCCTCCAGGCACACAGAGAGCTGAGGCAGAGCGTGTCGCTGGGGGACCCGGACTGACACTGACCTGAGCCGTCGGCACCCAGAGGGGTCTCAGTCTGCAAAGCCCCGTGATGCTGGTTTCAGGCATCAAGGCTCCGGTAGCCAGTCCTGGCTGCGGGGCACGGGTGCTGTGACCTCTGCCTGCAGCTGAGCGCAGGGCTGGCTGCAGGCCCTGCCTCTGCTCCCGGCTGGCCGCCCTCAGCTCCCAGAGCTGCCGTGTGTCCAGGTATCCTGTCCCTGAGGGGCTGTGGACACCGGGGCCAGGCTGGAGCCATTGGCAGAGGCTGTCCCAATGCTTGAGTGAGGAAGCGAGTGGGGACGACACTTGTGGGGACAGACCACCCCCCCTACTAGCTTCCTGCGGTCAAGGGAAGGACCTGCGGCCTGTGGGTTGTCTTGCCTAACCGAGGTACACTCCCTTCCCTCCAGGTGGCAGGGGCTCCAGGGGTACCACTCCAGCTGTGATCGGCTCCCCTCCCCTCTCCCCGCCCCTCGCCATCCCCCCTGTGTGGGAGGGGCTCCAGCTGTGAGCAGCTCAGGGTCCGCAGCCTGGTGCTGAGGGGCCTTAGCTTCCATAGGCCAGGATGGGGTTACCTGCCAGCTGACCCTTTGGGGTTCCATCTGTGGCCACAGGAACAAGCATGGAGAGCTGGGGTTATAGCCCCCCTACTAGGCCACATGCATGGTTGGGGCACTTGGGATGGGGGGTTCCCCTCCTCTACTTGGAGCCACTTCTGGCTCAGATGTGGGGTGCTCTCCTGAGGCCGCCCGGATCAGCTGAGGTCATGGGCACACACTGGCCCGACAGGCCACCCGGCTGTGGAACCTGAAAGGACTGGGAGAACTCTGGGGCAACTCCGGGCTTTCACAAATGGGTGGGCATGCAGTGAACTGAAACCTTCTTCCTAGTTCCACTCTGTGACCCTGGAGGCCAGAGCAGGGCATGAGTTCTGCTTTTGACCTGAACAGGAAGGACCCACGGTTCCATTTTGACACTTCTAGCTCCTGATTGTAATTTTGGCAGGGACCAGGGAGCAAGGTCCCTCCGAAAAGACAGCAGGGTGAGGCTGGGTGGAACTCAAAAGGACTGGGAATTCCCAGGGGCACCCTGGGGTCCTCCTCCACCCAGAGCCTTTGGTACACATGCAGAGGTTATGGGAGAGCAGAGGCTCGGGCACGATCCACCCCACGGGCACCCAGAGCCCACAGGCCACAGCAGGGGCCACAGCAGGGACCACGTGGCCGGCCACACAGGCACACCTTGGGCCGGAGCCTCTGCGGGCCCAGATCTGGGACCCCGAGGCCACCGTGCTGGCCAACACCATCAGCAGTGCACTGGGCAAGGTATTCAGGGCGAGCCTGTTCATCTTGGTTTGATCTTGGTTTCTGATAAAACACAGCCACTTCCTGTCCGCTGCCTCTGGTTTGCTGGCTTCTCAGCACTCTCTCCACTCTCTTAGTATCAGATTAAAAGGCCGCAGCCCTACAGGTTTCTCAGACCTGGGGGCTCATGTGCCCAGGAAGCCCTGCCATCCCTCCTGGAAGCTAAGCTAGAGGAGGTCTGTCACTTTTGGCCGGATCTGGGTCCCTGGGACACTTCCAGGGAGGGGGTGGGCAGCAATTCCCTGAGGGCGGAGCCGGCTGGCTGGGTCCCACGCAGCAGGCAGTGGGTTTGAAGGTGCTGCCTCCACCTCCAAGACCCAATGCCAGAACCAGCATACCAGCCTCCCGCCCCGCCCCCGCCACAGTGCCTGGGGAGCATCAGTACCAGTCAGTGATGACCCAACGTCCGGTCCAGGCCTCACTCCAGGTGCTGGGTTTCTAAGGACAGCAGGTGCGGAATAAGAAAAACACAATGGCGGTGGCCTACAGCTGGTGGCTGCAGGTAAGGCAGGTGGTGGCTCTGCAGGACTGTGTGCTGGCCACTAGCCCAAGCTCAAGTGCCCGACGCAGAGTGAGGCCAGACAAACCGAAACACCTTGGAGCAGCGAAAAGCTTACTGCAGGGCCGAGCAAAGAGATTGTGGCTCAGGCCCCACCCCCAAATCCCCGAGCTCCTCCAAGATTTCGACAAAGCATTTTTAAAGCCAAAAGGAGGGAGGGGGCTTAGCAGAGTATGTGATCAGTTTGTGTCCAGTTCTCTGATTGGTTGATGATGAGGTAATAGGGCAGGATCACAGGGGTTAACATTATCAGTCCTCAGGATCCAGTAGGTCCCGGGGCCGTGTGTTCATGGTCATCATTCAGTCAGCTTCTTCTGTTTGGTGGGGATTTTAGCTTCTGTAAAACAACCTAGGAAATGTATCTCAGAGACTGTTATCTAGGTACTTCAGGGAGAAACTAAAGCTTCTGTGACTGCCACATGGCTGAATTACTGTTTAAATTCTTACCAGTTCTCCCGGCCCAACTGCCGCTGTTACTACACATTCACATCCTTTGATCATAATTCCCCAGCCAGGCCTGGGAGACCACAGCTTTTCTGTAAACAAGAGGCAAGCAGAGGATGGGGTGGGCAGGGCCTGTCCAGTCACACCTCCTCGCCCTGGGGGCAGGCGTCCAGCAGGCAGCCAGCACAATCCTGGTTCTGCCTCCTGCCAGGAGGCCTGGGCACACCGAGTCTCTGCTCCAAGCTCAGCTCAATTCGCTGAGGACTCAGGGCCACAAAGGTGACACAGGGCCCTGACCCAGAGCCTGCCACCCCTCAGGCACACCTGTGTGGTGTGTGTGTGTGTGTGTGTATGTGTGTCACTGGCAGGAGGCCCACTCCCTGCTCACCCTTGGAGGTCAGGATGGCTCAGCGGAGTGGAGCACATGACCAGCTCAGGCCTCCTCCCCTGCTGGTCACACAGCCTGGGTGAGGGGGTAAGGGAGACTGACCTGTGTGGGCCCCACCCCACCGCTGAGCAGCCCTCAGCAGCAGGGACTGGGCCTCCCAACTCTGTGTCTCCAGGCCCAGAGTCTGGGGTCTGAAGCTATGTCACTGCCCCTTCCCTCCTCAG
Seq C2 exon
GACATGCTGCGCCAGCGCCCCCAGCTGCTGCTCCTAGCGGGCCTGCTTGCCCTCCAGTCCG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000017060:ENSBTAT00000022687:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.000
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development