BtaINT0095731 @ bosTau6
Intron Retention
Gene
ENSBTAG00000004073 | MTA3
Description
Bos taurus metastasis associated 1 family, member 3 (MTA3), mRNA. [Source:RefSeq mRNA;Acc:NM_001101964]
Coordinates
chr11:25159177-25172519:+
Coord C1 exon
chr11:25159177-25159323
Coord A exon
chr11:25159324-25172445
Coord C2 exon
chr11:25172446-25172519
Length
13122 bp
Sequences
Splice sites
5' ss Seq
ATGGTATGT
5' ss Score
8.35
3' ss Seq
CATATATCTCCCCATTCTAGAAA
3' ss Score
8.97
Exon sequences
Seq C1 exon
AGATCCATCCTTCGAAGAAACCTAATGTAATTCGATCTACACCAAGCCTGCAAACCCCAACCACCAAGCGGATGCTAGCCACCCCGAATCACACGTCTCTGAGCATTTTGGGGAAAAGAAACTACAGTCATCACAATGGCCTGGATG
Seq A exon
GTATGTAAACCCAGGAATTCTGGGGGCTAATCCCATAGGCCAGGGCCTCTCTGCCCTTGACTGCTCTAGTGTCGGCTGCCACGTGCATGAATGCATAACAGGTTCTTCTTCCCTCTGGTTGGACTGTGCGGAAAGGGGGATATAAGGGAAGGCTGCCGTGTACCACAGTGAAGACATTTTGCCAACTGCTATTTCTCCATCTTCTCAGAAGGGACCTTTTTGCTCCCATTTCCTGTTAGGAGGCCGGTTTGGAAACGAAGTCTGCATTTAGCAGGTTGCCTCTGCTGGATAATAATGCTCTTGCTGTGATGCATTCTCACTGCTCACCTCTGTTTTCTTGAGCAGAAGGGATTATTTTGCCTCGTGTCTGAGACAGCAGTGCTCTCTGGGGGGTTCTTCGGTGTTCTGCGGATCATTTTGAATTTGGCATTTGTCCCTGACTTCGTTCACCTTATAAATTTTCTTAATTGCTCAAGAGTACTATAAGTCATGAAAAGAATTACCTAGGTGATGTCCTAAATACAGAAATAATAATTTGTTTGAAATGGGAAAACTGAGAAATATCACCTCTTATCCAAAGTACTTCTCCTGGGCTTGGCCATATAATGACTCTTCAGGTGGAATTGAATTATCATCCCATTTGGACTGTAAACACAAGCATTATAAATCATCTGGGCAGTACATATTGTTCATTTCAATAGTCCTAGAGTTTGAAGCTGTCTTGATTGTTTAAATGTTGGCATTTATTTATGAATAAAACTCCAGGCTTTTCATGCCTTGTGGGACTCTAAATTCTGTCAATGGCAGTAAGTTATTTATACTGAGGCCCTAGAGCAAGGATGTGGAGGAGACCTTCTGGTAATAATTTCCCACGGTTGTTTTCCTTCTGCATGACTTTCGATGGTCATAGTGATGTCACGATGAATCAAAAATTGAGGGTGACGAGTTTAGTTTGCATTTATAGGGTATCAATGTGCTGCAGATATGGCTTTCGAGAATTTAGCTGCATAATAGTCTTGCAGAAATACTTCCTTGTTAATGAGAACATCAGCCATCCTTGCCTCCTCAATATGCCCGATGTCTAGTCAGCAGAGGTCCAAGGAAGGATTGTGTCAAAATGTGGAGACGGGATTGCATTCCAACTTTTCCTTGCCTGCAGCATGGGACCTTTAGATTCAACCTTAAATGGAATCAAGAATCTTTCTTTTCCATCTTATCACCTCCCTGGACAGTCTAGGTATGTAGTCCTACTGCAGAAAGTAAGTTCTTGTTTATTTTATGGTTATATATTCTGTATGGTAAAAAGAGTCCTGCTGTGACTGATGTTGGAACAGTGGCTTTTTAGTGTCTTTCTGCACTCGTGCCCCATGGTGACGGTCATTCTGGGCCCCAGTCCTACCCCTGCATCGTGGCTCCTTTTGTTCTTCCCTTGTATCACAGGACCTTGTCTCTGGAATTTCTAGAAAGTGCCACCATGTAGTGTTCCCTGTTTAGGGTCATTTGTCCCATTTCCTTCTGAATGGGTACTGTTGTGAGGGCATTGATTCTCTGCTCTGAACAGGAGGCACAGACAGGAGCGCCTAGTGAATCCCTGGGGTTATGTTGCTCGAGACCTTCAACCTTGTTAAGGAAAAGACACTTGTCTCAGTTTCAGAGGAAACGTAGCCGTTGCACTTTTCTCGAGACCCATTTGCCTCTGCTTCCCTGTCCTAGTACAGAGAGGAAGGCTGATTACCTGTGCCTTACCTGCATTATCTCATCTGATGCAGTTGACAGAAGGTTCCAGGTCAGAGGTCTTGACTGTTTTGCATACCATGGTATCTCTGCTGCCTGGCATAGTGCCTGGAACTTAGCAGGTGATCAATTAATGTTAGTTGAATAAATGAAAGTGATTGAGAAAAATGGGACCTGGAGGGGTGAATTAAATTTTCCAAAGTGACCAAAGTTGCATAAATGGGCTGGGGTTCCTATTTAGGTGTGACTAATTTCAGAGTCTGCTCTTTTACCCACTGTTATAAATGAAGTTGTGGCTCTCAAATGTGCTGTATTAGCAAAGTAGGGATGACATAAGTTATTGTAACAGCTCATTTAATATGAGAAATCAACATGATAGATGTTGAAGGACAGAATGGGTGAATAGGGAACACTGTTGGACAGTGGGGTGGGGAGAGGAAACAGCCACCATCACGAGAGCTGGGGGACAAGTGGAGAAGTTGGGGTCATCACAGCTAGAGGCCCAAGGAGCTGGGACCCAGACCCTTGAGGAAAGAGCACTGCCCTGCTGGTGCTGGCATCTCTCAGCAAGTGCAATGAGGCTGCTCCCGGGAGTGTGAAGTGAAACTGGGACCTGAAACACACTGCTCCCGACAGGAACAAGGAGAAGCGAGTCTCTTGCCCAGCCTTGCAGGTGCCCTCTAGACCCACCCCCCCCAACCCCCGCACTGGTGTAACAGGGATCTGAATGGCACAGGAGAAGAGCATTTGCAGTCCCAACTCAACCCAGCATCACAAAGCTGAGTTCAAGTAGATGGATGTGTAGCTGCGAGGCAAGAGGGTAACAGAAGTACATACTTTAGAAAATGTCCCCATTTTTGTATTCTCAGTGGACCTTTTCCTTGGGATAATGGGTCTATTTCTTACTTCTTTAGGATATAAGACAGGGACTAACCTGAGTTTCCAAGATGAACTCAAAGTACTAGATAAAAATCTTAGGCTAATAGTGAATTTTCATGGGAGAGTTAATACCATTATACACTGGAATTGATAGGCACAAATTCATGGAAGAGTCTTACCGTGTGTGATTCAATAATACCATCAATTAGCACTGCTATGTAATTATCAGCATGTCAGACAGATGAGCACACCAGACAGGGTGCTGGTGGACAGAACCAGTCCAGCTGGAAGCAAAACCTGATTGTACTGAGACATCCAGCCAGGTCTCTCAGCCCTGGGGCTTCCTGTCTGCTTCTTCCTTCTGCTTTTTGCTCCCTTTGCTCAGCCTCCACTTTCAGTAGGAGGTTCTTCATGGTGGGAAGAGTCTCTGAATTCCTGCTGGTAGACAGTTTTTTCAGTTCAGTCGCTCAGTCGTGTCCAACTTTTTGCAACCCCATGGACTGCAGCACACCAGGCTTCCCTGTCCATCACCAACTCCAAAAGCTTGCTCAAACTCATGACACTTTTTTACCTGACATTAAAAAAAAAAAAAAAAAAAGAGTGGGCAGCTTCTTCTTATCTTCTGAAAGTCACTGTCTTTCACCTGGCCTTGGCCTGTTAAAGGCCCTGGTGTGACTAGGGCCTGGGAGTCAGCACTCTGCATCTTCTTAACCCATGGTACCCAGCCACCCACAGACCTCTGTGATTGTCCTAATGGAACTTAGATTCTAAGGGTAAAAACAAAACCTGCACACATAAAAAGCCTCACATTTTGGAGTCAGTACAGACCTACCCAGATCCATATCAATGTCGCTTTATATTAGTCTTTGTTGTCAGGCTGTAGTTCCAGTGGTGGCCACATGCCATCAGGGTGCTTTCCAAATCCTGCCCCCTTTTCTGACTTAGAGATGACAGTCTTCTTGCCAGCAAGCCAAACACCTACCACATTTGGCTGACTCGGGTAACTCCAGTGTCTGTAAGAACAGAAGGCCCTAAGACCAGTGGGGATAGAAGAGGCATTACTTTCCATGTCTGGGAGCCCCAAAGGGAGGGCAGCAGGGGAAATGGGATTTGTCTCTGCCACGGAAAAAAGAACATCTGACTGTTTGGAGTGAGATGGGATGAATTGCTAACTTCTCTGATAATTTCCTGTGTGGCTTTGGGTAAATCATTTGGTTTCCATAACTATTTTTTTCTTCTCTTCTGTAAAATATAGATTTCATTTGCCTTAACTAATTGTTATAATGATTAAAAAATTTCACCTACTTTATACCACTTCATCTTCCAAACACTTTATGAGATAGATGTTATAACCCTCATTTTAATAATAAAAAAACCCAAGTTCAAAGAGGTAAAGGGATTTGCCCAAAGTCACCCTGCTAGCAATTAGCAGAAATGAGATTTTAAACTCCAAATCTAAGATTGTTTCCACTGGGTGAATAAGGATCCCTGATCTGTGTGTTGAGTACACCATGTACCTGGGAGATGTTTCTGGTTTTTTTTGTGTGTATCAAAGCTGGGTTTGTATTTGTAAACACAGAGAGGAACATAGAGGGCATTTTTCTTTGCTCAGACTGAACTATAAGCACAGCCGTCAGCTCCAGCTCTTGCCTCTGCACAGCTCCTCTGCCTGTATGCTGCTCCCTCCTTTTTCTGGAACTTAGGGGATAGAAGCTATGTTAGTGTCAGAGAGAGGGGAGAAAAAAGAAATAGAGAAAAACCCACAATCACCTAAAGGTGAGATGTGTTTCAATTATATTTCTGGTATCGACTCTGACACATAGTGAGTGTTTATTAAGTGTTACCCTGGAGTAGGAAATAGTAACCCACGCCAGTATCTTGCCTGGGAAATCACCTGGACAGGGGAGCCTGGTGGGTTACAGACCATGGGGTGGCAAAAGAGTTGGGCACGACTGAGCACGCACACATAACATTATTAAGATTTCATCTCCTCCTCTAAAGAAGGGCCATTATTGTTTTATTTTGAAAACTGTTAAGTTACCAAAGTTTTTATAGTCATATATGAATTGTATATGAATAATGTCAATGCTTTCCTTATAACTGCGTTCATTTCTTACCTAAAGATATGATTCTCAAAACAATGACTCTTGGATATTTGCTTAAAGGTAAATGGATATGTTCCAGTGTATATTTGCACATAGACAGGGCCAGTATTTATAAAGAAAAACTGCCCTTGTTTAAGAAATATTTAGAAAAGTATTAAAGATAAAATTAAGTTTATAAAGAGGGCTCATCTAGCTTCCTGTAGGTTCCTGTGATTAGAGACCCTACAGCAAAGGGGGTAGAACAGCGTCATCCTGAGACAGTGAAATCTTTTTCAGAGTGAAGGCTGAGTCAGGAAAGACTCCAGAAGGACTGTACAGGTATTTCCTGACCCCCTAAAGAGATGCCCCGGGACCGCTTCCTACCTAGTGTCAGATGTTTGTGTTTCGGTATATCAGCAGAGCTTCCATCGCACCGCACAGGCACAAGGGGCTTCCTCCTGCGTCTCCATCTGTATCACATGGGGAGCTTTGAGAACAGCTTCATCTGTGTAGTCATGCAGACCAAGGGAGCATCAGCTAGAGGTGCTCTTAACCGTCTTCTGAGACGGCGTGGCTTTTGTCCCAGGGGTACTGCAGAAACAGGACTCAGTGTGTCAGGAAAACCAAAGCAGCAGGCTCAGAAGAGAGGTGAGTTTTCAATGGAACAGAGTCAGGGCATGTGAGCCAAGGAAATTGATGAATTGTATAATAAACTTCTTTTTTAATCTGCTCTCTTCCGGCTTATTTCCCCTGAGGTTTGTGAGTATACTGCAGATTGTTATCTTTCTCATGTGTTCGCTGCGTTGACTAATAGCATTTCTCAATGTCTTTATACAATGAAGGGGGTATCTGATGGGGATGCCTCTAAGTCTAATACTATGATCTGGTATGTGAAGACTGTCCTTTGGATCACTTATTTCTGAAATCAGTGATTCAAGAGTTCCAACTGTTTGCTTTCCACCCTGGGAAATGGGTGGAGGTGAGGCCATTGTACCAGTGAGAGAGCTCTGGGATTGCATCTGCTGTCTTTACAAATCCCAATAAAAATAGACTGCCAGGAGCAGCTGATGGCACTCCTAGGCATGCTTAGGCCCGGGCTGCCTTCTGTCAAACATTTTTATGTCATTTCAAAAGACTATGATTTTTTTTCGAATCTTCTAAAATATTTTTTTTATGGAAGAACATTGAGTGCTCCTGGACTCACCTCTGGTCTCCTGTTCTCAAGCTATAATGTTAAAACCTGATTAAATATATTAAAGTACCTTCAAGTTTCTTTTTTTCTTCAGTTTTTATAATGGATTATTATGGTCCCAGAGTTTATTGAATGTGAAGCAGGTATAGAAGATTATCTAATGTATCTGGAGAGTTTCAGGACAGTTAAAGCTTTATCTGAGGGTAGCGGATGTTCTCTCACGTAGGAGTAGGGCTTCTGAAGGAAGACTGGCCCAAGTACCTTAGGTGTGAGTAATCAGTACCTTGGTGTTTTGGCGTATTCTGGAAGGATGGCAAACTGGCCTCCTCAGGGTCCATTGCTGGGTTTAGTAGTAAATATCACAGTATTCCCAGAGAATACTCTTCTGTCCTGCCCCTGAGGAAAATGCTAGTGTGCGAGCCTATAAGTGGTCTAGGTTTAAGATCCTCTCAGCAATATGGAGGGCTTCCCTCGTAGCTCCATCAGTAAAGAATCTGCCTGCAATGCAGGAGACCCTGGTTCGATTCCTGGGTTGGCAAGATCCCCTGGAGAAGGAAATGGCAACCCACTGTAGTATTCTTGCCTGGAGAATCTTATGGACAGAGGAGCTTGGCAGGCTACAGCCCATGGGGTCACAAGAGTCAGACACGACTTAACAACTACACCACCACCAGCAATATGGAGATTTTAGAAGAGAGACACAAGTCCTTGGTAGTTACTCAGAGGCCGACGGCCGTGAGAACCAGCTCTGGCTCCCTCAGGAAGTCTGTTTACCTTCAGGGGTCATGCAAGGAAACCTTTGTAACCAGCCTATCCCTGTGAGCGCCCATCCTCAGTGACGTAGAGGGGGAACCTCTGAGAAAGGAAGTAAACCCCTGACTGAAAAACTGAGTCCCTATTTTGAGGGGGTAATGGTAGATGCTTGGGAAAGGAGAGGGAAGAAGTCAGCAGAGGGAGGGAGCTTCATCCCTGAGAAGCGAATCTTCCTCAGAAAAGAGTGGACTCATTCACCTGAAGAGCAGTCCACGGCTCCTCGATGCTGGCTTTAAGAAAGCCAGCGGAACGTCAGCATTAGATCTTGATGCCCCAGGAAAGTGAAGCCCAACAGCCGATTTAGGCATCCCCTGCCCAGTCTCTTCAGATCCCAGTGAAGAAGTGAGGAGAAGTCTTCTGAATCTGCACAGCTCCCAGGGCAATGACTCCAGAAGATGAGTCACAGCCTCCTTGCCTGGGAGCCTCCCACTGGGTTCTTGTTAAGCTCCCCAGCCTTGCTCCTTATTTTCGTTCAGTGTTTCTTGTTTTCCCTTCCAGATGACTGAGCACTCTTTAAGCTCAGAAAACATCTGAGTTATAATGTATAGCATTTTCCTCCCTCAACCAAATATTTATTTTTATCCGCAACTATTTACATATACATGAATACGAAAAGTCATTAATGTAAAACTGAGGAACAGGCTTGGAGGCAGCTTTGTTAGGTGAGCTCCCTAAGAAGATGTGTGCAAAGACCCTTCCCACGATGGTCCGATTGCAGCTTCACTGAGTGCCTACAGGAGCTCTTTGGGGCCAGTTGTTGACCAAGGCCATGAGTGAGTCCTGGGGAAACAGGGCGGTTACATTTAAGGTATCTGGGACCAGAGAGCAGAAAAAAGGATCAAGATACTGGAGACTTGGACCTCCTACATTGCTTTCTAATTTTCTTCTTGTTTTCCTCCAGTTTTCTTCCCCTGTGTCTGTTTACTTTCTGCAGAGTACTGCTTTACCCTACTTTATATTCCAACCAGGCTTGTCTAATTTCTCCCTAAAAGTTGCCAATTTTTACTTCATGTAATTTTGAAATTGTTATTGGATATATATGTTGTTGGACTTTTTTATGTCTTTTTGACCTTTTTAATCAGTAGGAAATGATCCTTTTTACTTCTGTTAATATTCCTCTATTTTGTCTGATATTAAAACGAATGTACCAGTTTTCTTTTTCTCTTGTTTTTAGTTTTTTAAATGAATTAAAAAACTGAAACTAGAAAATTTTTCTAGTTTTAGTAAACTCAGAATATAATGATTCTTATCGCATCTCTAAAGTCAGCACAGGTTGTTCTAGCACATATTTTAAATACCCTATAAAGCTATTTTCCATTATCATTTAATTTAAAAACAGCTTTACTGAGGCATGATTGACATTCAGTAAGTTATACATATTTAAAATATTCAACTTGATAAGTTTAACATACACACACACACACACCAGGAGCCATCATCATAATCAAGATAATAAACTTGCCTGTCACCGTCAAAAATTTTCTTGCACTCCTTTATAATTGGCCCTCTTGTCCTCCCTATCACTCCCACATCATCCCAGGCAGCTGCTGATCTGCTTTTTAGCACCATAGATTAGGTTACATTTTCTAGAATTTTATTAAATGGAGTCATGCAATATTTACTCTTTATTTGTCAGTTTGAATAATGTTTGGAGATCTACAAGTTCACTGATTATTTTTTCAGCAGTACTGAGTCTTCTGTTAATCCATCCAATGAATTATTCATTTCATATTTTGTATTTTTCAGTTTTAGAATTCCCATTTAGGTCTTTGATATTTCAACTAAAATATACCATATTGTCCCCCACACATCCATCTTTTCCAATGTATTTTAAAAACATACTTATAGTAAATATTTTAAGTCCATATCTGCTAATTCTAACATCTGAATCATCCATTAATCATCTTCTACTGACTGTTTTTTTCTTTTGATTATGGGTATTTTCCCGTTTCCCAGGTCTAACGGTTTTTAATGAATTCTGGTCAGTGTGGATGACAAGTTGTGGAGACTCAGGATTCTGTTATTTTCCTCAATGGAGTTGTTTTTTTTTTTTTTTTTTTTTTTCTGTAGAGTTTTAAGGTATGTTCTAACAAGCAATTAAATTTGATGCTATGCTAAGTCACTTCAGTCGTGTCCGACTCTGTGTGACCCCATAGACGGTAGCCTACCAGGCTCCCCCATCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGTCACCTAGTCGTGTCTGACTCTTCGCGACCCCATGGACTGCAGCCCACCAGGCTCCTCCATCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGGGGTTCTTTACCACTAGCGCCACCTGGCTTTATTAGGGCTTGTCTATTTCAGTTATGCTCCTAGTTCCATGAGATTTCAGTGGAAAGACCAAGTTGTTTGCCCTGTCCTTCTAGCTTGGTAGAATTTGAATTCTGAACTCTGTCTTCCCAGCACTGGACAGCTGCTGAGGTTGTTGCTTAGCCTTTTTTAACGTTTCAGCTGATGTTCTCCGGTGGGCTCCTGGGAGTCTCATTTTGTCTGTGAGCAGTTCCGAAATCGGCCAGTGATTTGAGAGGAGTGTGTATGTTCATCTGGGGACTCCCCCTTACCTGTGTCCTTCCTTTTAGAATCTCTTCCCTCAATTTCCAGCTGTATTGGCAGCCTTGAACTCCAATCTGTCCCTGATTCCTCAGCTCAGTCAGACTGCAGCTTTCTCCTGGAACCATATCCCTCTGTATGGCATGGAACTGCTCACAGGGGTACTGTTAACAGTGAATCTTCCCTAGTCTTGCCTTTTTTCAAGTCATCTCTCTTCCAGTTTATGCTTGATTTTGGTTGCTCTCCACTATCTTCAAACACTTGTTTTTATATTTTATATAGAATTTATCACTGTTTTTGGCTGGAGGGTTAACCCAAGATAAATTAGCCCACCATTATAGGAAGCAGAAGAGTTGAGCTTTTCAACTGTGGTGCTGGAGATGACTTTTGAGAGTCTCTTAGACAGCAAGGAGATCAAACCAGTCAATCCTGAAGGAAATCAACCTTGAATATTCTTTGGAAGGACTGATGCTGAAGCTGAAGCTCCACTACTTTGGCCACCTCCACTACTTTGGCTCACACTACTTTGATGTGAAGAACTGACTCATTGGGAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAGGAGAAGGGGACAACAGAGGATGAGATGGTTGGATGGCATCACTGATTCAATGGACATGAATTTGAGCAAGCTCCGGGAGATGGTGAAGGACAGGGAAGCCTGGCGTGCTGTAGTTCAAGGGGTCGCAAAGTGTTGGACACAATTGAATGACTGAACAACAACAATAGGAAGCAGAACTCTTCAGTCCTTCTCCAGGCTCCCTGCCAACTCTGTTGGTTCTCTTAATTTATTTTGAAATAATATACTGTTTGTGTCTTGTGGACACTGTATCTTTCCTTACCTGTTTGAGGATATTAATGATAGTGGTTTCTGTTTCTTGAGTTTTCTTCTCCATGAATAATCCGTTTCTTCCAATTTGCATTTTCCTCTGTTTTGGTCTCTAACGTTTGTGTTAGAGGTTTCTTCCTGGTGACCTTTGGTTGTGTAATAGTGTTTAAGAGTAGGAAACTAAAGTCAGATGAAAGCTCTGTACTTCAACCTTCAGTGCACCTCGCAGAAAGGACATCAGACCAGGCTGTTTGTTGAGTGGCCCGAGGGTCAGTATCCTCAGGTCTTTTCTGTGGGCTGGGCAGATTTCCCAGAGAAGATGCTTTGCATCTATCTTAGTCCATTCAGGCTCCTGTAACAAAATACTACAGATGCGTACTGTAAACAACAGAAATGTGTTACAGTTCTAAAGGCAGGGAAGTCCATGAGCAGGGTGCCAGCATAATTGGCTTCTGATGAAGGGCCTGTTCTGGGTTGCAGACTGCTGTCTTCTTGCTGTGTCATCACATGATGAAAGGAACTAGGGAGCATGTAGGGTCTCTTTTATAAGAACATTAATCCCACTCATGAGCTTCCTAGGAGGTGTTAGTGGCACAGAATTCATCTGCCAATGCAGGAGACACAGAGGTTTTATCCCTGGGTCGGGAAGATCCCCTTGAGTAGGAAATGGCACCCTATTACAGCATTCTTCTTTTTTTTTTAAGTCTTTATTGAATTTGTTACAATATTGTTTCTGTTTGTTTTTTGGCTGCAAGGCATGTGGGATCTTGGCTCCCTAACCAGGGATCGAACCTGCACCCCCTGCACTGGAAGGCAAAGTCTTAACCACTGGACCGCCAGGAAAGTCCCCCGTTACAGTATTCTTGCCTGGAAAGTTCCATGAGCAGAGGAGCCTGGCGGGCTACAGTCCATGGGGTTGCAAAGAGTCGGACACGACTGAGCACAGACCGCAGTCCCATTCACAAGGGTTATACCCTCATGACCTAAGCACTTCCCAAAGGTTCGGAATTCTGATGCCGTCATATTGGGCTTTAGGACTTCAACATATGAATTTTGTGGGGACACAAACATTCAGACCACAGCATAGTCTCTTTTTCAGAGGATAAAGTTTTGGCTACCTGCTTTCTGGGAGCTCAAGGGGAAGAAGGCTGGAGGTCTTACCATTCAGTGGATATACGCTCACGTGAGCCCTCAGTTTCGGGACTGGCAGCCCCGCTTGGCGCCTTATGTTCCCTAGGCCTGCAACCCCCTATTTGGTCCTCTTTAGAGAATAACTATCCAGACTTGTGGGAGGTGGGCAGCTGCCGAGAGGTGTGGAGTCAGGAGCACTTCTAGGAGTCCAGCAACCTCAGCCTTCAACTGATCTCTGCTGCAGTCTCCCCTCCCCCAACCCCCTCGAGGTGTCTGGTATCCATTCCTGAGCTGTTTTGTGCATACTGGGCTCGCAGCTTTTCACACTGCCAGCTTCAGGTTTGGCTTTCTTGAATGCATGGGCTGTTATCACTTGTTTATCTGTTTTCCAGACTCCAGAATTCTGATGGTGGTTTCTCCTCTGGGTTTCAGAAGGGGAAGAAATTAACTCAGATACTGGTAGCTGGAAACCTTAAAAAAAAAAAAAAAGATTGTTTATATCACAGCAGCTGGTTACAGTAAAGAACCTCCAAGTCCAGGGACTTTAAATACTTTGTGTGTGTGTTTGTGTGTGTGTTAATTGCTCAGTTGTGTCTAACTCTTTACGACTCTCTGGACTGTAGTCCACTAGGTTCCTCTGTCCATGGAATTTACCAGGCAAGAATACTGGAGTGGTTGCCATTCCCTTCTCCAGCAGATCTTCCCAACCCAGGGATCGAACCCGGGTCTCCTGCTTTGCAGGTAGATGCTTTACCATTTGAGTCACCAGGGAAGCCCTTTAAGTACTTATGAATAGTCAAAGCAAAAGGGAAAATTTTGTAAAAAAATAATAAGTGCTTATAAATCAGAGTTAGTATAGACAGAAGTAGCAAACGTAGATTGATGCATATCATAATTTACTTATAAGTGTAAACCAAAATGATCTGGGCTACATCATCTAGGAAGGAGACCTGAGAATGGGCATAGATCTCTTTCTGGGGCCCTGTGTATCTGGGACCCTTCACATGGCTCTGGTTCCCTGCTTTGGGAAATGCAGTGGGGCTGAGGAAGCTTTGAGAAGGGAAACATTTTGGTATTACAAGCGCAGGTGGTAAGCACTGGGATGCTTCAGCCCAGAATGCAAGAGGTGACATATCTCAGCTTAAAACCATGGCCAGTATGGAGAAAGCAGGTGTGAACCTGGATGCCAGATCCTGAGCTGGTGGGATGAGAGGGTTGCTCTCAAACGTGGAGCAGGTAAGTTTAGCTCAAATAGAAGAAAGCACAATTTATCATGGTAGGCCAGAAACTTTGGAAACTATTTACAAGTGACTCTTCTGGCAGATGGCTTAATTCCATAGGTGGGTGGATAAATGAATGGCAGAGTGGTCCCCCTCACCTCTCCCCACACACACAAAAGGAGAGAGGCTTCTGAGAAATACTGGAGATACTGACACACACATAACCCGTAATTTAGACACTGAAGAGAGCTGTGTGCTCTCACTGGGATGGATGGAGAATGGGGCAGCTTAGAATAGCAGGAAAAACTCTACCTAAATTAAGAAGATCTGAGTTCAAATCCTGACTCCTCAACTTACTCACCGTGCAGCCTTGAGCAAGCTCCTAACCTTGCTTACCCTCACAAGGTTCTGGTGAAAGTTTCTTCCATAACCTAGGGAACAAAGCAGGTTAGCCCAGTCCTGAACTGAACTGGCTGGGTTTTGATTGGACACATACTTGCTGAGCCCTCTCCAATACCAGGCTGTGTGCATATATCTCCCCATTCTAG
Seq C2 exon
AAAGGCTCATGAAGTGAAGGCGCAGCTCTGCTCTATCCTGCAGCCCTTCCTCAGGATGGCGGGAGGCTGTGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000004073:ENSBTAT00000033090:15
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (disopred):
C1=1.000 A=NA C2=1.000
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Human
(hg38)
No conservation detected
Mouse
(mm10)
No conservation detected
Rat
(rn6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development