BtaINT0145421 @ bosTau6
Intron Retention
Gene
ENSBTAG00000005493 | TBC1D14
Description
Bos taurus TBC1 domain family, member 14 (TBC1D14), mRNA. [Source:RefSeq mRNA;Acc:NM_001099176]
Coordinates
chr6:118290890-118306209:+
Coord C1 exon
chr6:118290890-118290999
Coord A exon
chr6:118291000-118305950
Coord C2 exon
chr6:118305951-118306209
Length
14951 bp
Sequences
Splice sites
5' ss Seq
TTGGTAAGA
5' ss Score
8.85
3' ss Seq
ACGCCCCCTCTCTCCCCCAGGAT
3' ss Score
11.22
Exon sequences
Seq C1 exon
ATGTTGACGTACTTTGCTGCATTTGAGGTATTCTTTGAAGAAAATTTGCCGAAATTATTTGCTCATTTCAAGAAAAACAACTTAACTCCAGACATCTACCTAATTGATTG
Seq A exon
GTAAGACTGCATTTTTATGCATCTTGAGAGTGTTTTCTCATGTCTGTGCCCCCATCATTCATTCCTCACTGCCGGCTTCTTTTGGGGCCCAGGTGGCCCCCCACCTCCTGCTTTACAGTCTCCCTTCTGTCCCGAGCCCAAGACGCCCTGTGTTCACAGCCCGGGCTGCCGGTCATCAGCTCGGCTCTGATCCTCTCTTGATGCCACGTGACTTTCACCGGTCTTTCCCAACTCCCTCCAGGGGAGGAAGGTGCCTTGGACCTCTGTGTTTCCAAGATTCTATTTACTTGTTCCTCCCCGAGACGTCACTCAGCCCTTGGCCTGTGCGGGCTCTCCGCTGGGATCGGGGGCAGACTCGGCACTTTATGTCCAAAGCTCCCACCTGGAGGAGCGCCTGGACCGGGGGCCGTGCAGCCTGTGGGGGCGTCAGGGCCCACGGGGATGACCCCGAGCTGGAGCCGAGGCCTGCCGTTAGCATGCGCACTCTGGGATCAGCAGGCCACGGCTGGTGGGGTAGGATGTGGGAGCCTCCTGCAAAGGGCCAGGGCAGCAGACGCGAGCTCCAGAAGCTGAGTCAGGGGTCGTGGATGCCAAGCTGAGGGGCTCAGGCAGGAGTCCAAGGGCCAGAGGGAGAGGCTGGCGGCTTCCACTTGGGGCGAGGATGGCGGCGGGTTCCGCCCAGAAGTGAGTTTCCGGTTCCCGGGGAGGCAGGGGAACCGGGAGGCAGAGACAGTGAAGGGGAAGGACCGGGGCTTGAGCTGAGGCCACAGAAGTGGGTGGAGGGCCGGGGGTGTCGCACTGGCCAGAGGCGGGGCCCTGGGGCATACTGTGGTCGTGAGGGGTGCCGCGGGTGCCGTCAGCCGCGCCAGGCTGGGCTTGGCAGGATGGCGAGCCGAGCCGGTGTTGGACACGGTGGTTTTAGGGCACCTGTCGGACATCGAAGTGGCCGTACAGATACAGGGTTCCAGAGAATTCCTGCTGGAGCCTAGACCAGGAAGTCTTCATGCAGGTTGGATTAGTTGCCTGAGGAGAGGCTGGAAAGGCTGGGGTGTCCCCCACCGGGCACCAGGTGAGGAGGCCAGGGCCTCCTGGGGAACAGGGAGCGGTGTCTTGAGTCCCGGAATCCCGCCTGAGCTCTGGCCACTCCCGTTACGTCCCTATAGCCCAAGCACGGCTGAGGAGCCTCCCTGAGCCTGTGGCCTCGTCTGTCCACCCAGACGACTGGCCTCTGAGGGCCCTGTACGGGGCACCAGCCTTGCGAAGGCCTCCGGCTCGCAGAAGGAGGCGTCTCTGGACTGAGAGGCCGTTTGGGTTTTTGCACCAACGTGCGCGGTGAGCCCACAGCTGCTAGGAACACACAGCGGGCTTGGCTTTCCTCTGTGCTACTTGTTTCAGGAGGCAAAGGCTTACCTCTACAAGGCAAAGGCCAAATGTCTTCTGAAATGAGGCCCCGCCCTTTAAGTAAAGCTGATTTGTCTGCTCCCGTGGGAGCAAGCCTGGGGGATGTTGCTTCTGTCCTGAATCCCGGAACCGTTCGAATTCTGCTGAATTCGTGCTGGGGATGAGGGTGTGGAGGTCGGGGCTGGTGTCACTGTGGGTCAGTCCAGACGTGAGGCCACGAAGCCGCCACTGGTGGGGGCTGGGCTGGCCTGGCCTGTCTGGGAGTGTTTGGGGCCAGGGTTAAAGGTCACCTCCATTTAACCAACAAATGATTTCTCCACACTGTGAACAGTCAACTCTTGCACAGACTGTCCTGCTACACGCCTGTTTGTGCACCTGTGCTGTGAGATTTGACTGTGAACCCTGACCTCGCAGATTCCCAGGCCTGAAGAGTGTCAATGTAGGGTCATATGGGATCAGAGTCTTCAGCTTTGACATTATCTGCTTAGGCCACCGAGTTAGAGTCTTAGGATTCCCGGCTCACGAGGAACTTTGGAAAACACTGTCCTGGAATAGTGTCTCTCAAGCTTATTTTTGCCCTGACTTGCAAAAGTAAATCAGTTGTGTGTTGTGACGCAGTGTGTGGCCGTGTGTTTGGAGCAATATAAGATAACGTATATGATAGAAACAGTTGTAAGAAACAATACTCACCAGCCTTTATTATGTGTAGAGAGCATAATGAAGTCTTCTGTTTTCTTTGTGCAAAAAAAAACCAGGCTGCTGCTGCTCCATGCCGATGGTGTTACAGGGCAGCGGTCAGTGACGGCCACGACGGGCAGCATGAGGGGTGCTGTACTGCAGGGAGCGTCTCTGCTTCATTCCAGGGTGATGGGGGAGAGGGGCCCAGGCCACAGGGACTCGCATCTGTTAGCGCTTCTCACGGTATCTCATTTATCCAACCCTTAGAACAGGCCCCGGGAGCGAATCGTAAGACATCTGTTTGACACGTGAGGAAATGGAGGCTCGGCGAGGCAGAATGACTTGCCTGAGGTTGTTGGCTTGCTGGATGGCAGCGCTGGTGTTCGAGCTCAGGGCCAGCTCCAGAGCCTGCATGCGTCCCCTCGGAGTGGGTTGAGTCTGAGGGATTTCTTAACCAAGGCAGCATACCCCGTGCGGAGGGCCCCAGAGCTGCAGTCTATGTGTTGGTGAGCGTGGGCAGCGAGGGTCAGACGTGTGGGTGGTGAACGTGGAGCAGAGCGCAGGTGTCTGGGTGCAGGGCCGCTCCGAGGACTCCTGCCCTTAGACCTTGTGACGTGATGTGCTTGGAGCCTGAGGCCCTGTGGATGCTCGCGGTGCCTGGGTGCGGCCTCTGCTGGTGCTGGGGCCTGGCTGCTTCCTGGAATCAGGGCCATGGGTGCCCTGTCTGTGTTTGCAGTCCCAGCGCGGGGCCGGGTGCACAAGGGGTCGTTAGTAGGTATTTGAGTTGATCTAAGCCCAGGAAACCGCGCAGTGCACATCTGAGCGCATCCGCAGGGACCCAGGCTGTCCGTGCGGTGCTCACGGGCAGGTGGAAGCTCAGAGCAGGAACAAGGAGGGAAGGAAGCCCAGGGAAAGGGTTGCTCAGGACCTGCCCCAGAGGCTGGTGTTTCAGAGACACCGCTGCCCTGTTGCATCTTCACAGCGCCCGGAGCAGTCCCCTTTTAGCACAGAGGGAGCCAGCGAGGCCCGTCCCGCAGTGGGCAGCCCAGGTGGCCCTCTCTCCGTGCTCATCCTGCTTCTGCTGTGTCCCAGCCCCTTCCCCGGCCACGTCTGCTCCCCAGCGGCAGGGCTGCCTCAGGCACACACGGCTGTGCGGGTGTCTGCAGAAGATCAGGTCGCTACCCCCACCCCCTGGGCCCCCGGCCCTCTGCACGGCTGTGGGCCCCGCGGTTTGGCTGCTGAGTGTCCTGGGTGAGCCGTGTGGGTGCTCATGGGAGACCTGTCTGCCTGCCAGGAGCCGTTTAGGACTTGCTCCTTCTTCCATCGCGGGACACTTTCTCCACCCCCTGGGTTATTGCGTTAGTTTTATAAGACGTGGTCTTGCCCAGTCTGAGAGCCCCTCTTCCAGAACCCCACTCTCTCCCCTCCCCACAGCGGTTGGGGTTCCCTTCATGAGAGCACCCCTGTTTCTCGCTGCCCCCGCAGTGGACCCAGTGCAGTCGGTGTCCTCAGTGACCCCCGTGCCCGGCCCCATGCTGGGCTTGGAGTCCTGGACCCAGGGATGCACCCGCTCCCAAGGGGCCCCTTCCTCGGGTCTGAGGTGCACGGAGTCCAGCCTGTGTCTCGCACGGGTGCCCGCCTCCCCACGTGTTCAGGGGCTGCCGTCTGCCCAGCGCTGCAGAGACTTCACGGTGGAGACTCAGATTCACTTGCTGAGGCCGTCCTCCTGGCAGGGATCTTACCCAGTGTGCTCGTCTCTCCTCTCAGCTCACACAGACACAGGGGGCCGAGCGGGCTCTCGCCCTCCATTCCCGGCTTCCTACAGAGTTTCCATCGTTCAGACCATCAGATGTCCGTGTTTTGTGGGAGAACTGACATGCAGTCAGTTAACTTGTCAGAATATTTCCCACTGCTGTCAAATATTAGAGTTATTAGGAGGCATGGATAGGTTTTGTAATAGATAATCCTGAATTAATGGAATAATTAAGCAGAACATTCTGTATCCTGATTAACGTTTCTTGAACGTTTGGTGGTACTTGGAGATCCTGTCATCATACCGAGTCTCTACCTTAAAGGCAGGTTGGGGTGAAATTACTGACGGAAGAGTTTTGTTTCCATGGCATCCAGCATCCTTATCATTCATAGCTTCTACTTTCCGGTTTCAGTCAGTTCAGTCACTCAGTCGTGTCCAACTCTTTGCAACCCCATGGACTGCAGCACACCAGGCCTCCCTGTCCATCACCAACTCCCAGAGGTTACTCTCAAAGTCATGTCCATTGAGTCGGTGATGCCATCCAACCATCTCATCCTCTGTCGTTCCCTTCTCCTCCTGCCCTCAATCATTCCCAGCATCAGGGTCTTTTCAAATGAATCAATTCTTCACATCAGGTGGCCAAAATATTGGAGTTTCAGCTTTAGCATCAGAGCTTCCAATGAATATTCAGGACTGATTTCCTTTAGGATGGACTGGTTGAATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTTTCCAACTTTCTTTATAGTCCAACTCTCACATCCATACATGACTACTGGAAAAACCATAGCCTTGACTAGACGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTTAATATGTTGTCTAGGTTGGTCATAACTTTCCTTCCAAGGAGTAAGCGTCTTTTAATTTCGTGGCTGCAGTCACCATCTGCAGTGATTTTGGATCCAAAAAAAATAAAGTCAGCCACTGTTTCCGTTGTTTCCCCATCTATTTGCCATGAAGTGATGGGACCAGATGCCATGATCTTATTAGCTTTCTAAATGTTGAGTTTTAAGCCAACTTCTTCACTTTCATCAAGAGGCTCTTTAGTTCTTCTTTACTTTCTGCCATAAGTCTGGTGTCGTCTGTGTATCTGAGGTTATTGATATTTCTCCTGGCAGTCTCGATTCCAGCTTGTGCTTCATCCAGCCCAGTACCTAAAAACTCCTCCAGAGCAAAGTTGTCTTGCTGAGCAGCAGGTGTTTGAGTTGCATCTGGCACCCCATGTGGGGGCCTCCTCAGCGTATGTGCGGAGGGTGGGAGGAGGTTTCGGAGCCTGAGGCTGGGGGACCTTCAGGCAGAAGGACTCACATAGCCTGTGGTCACTGGTGCACCCACCCCCGCCTGGCGGATGACAGAGCCTGGGTGCTGAGGTAGGGTTCACATTACTTACCTGCTGTCTGCAGCCCCTGCTCAGGGCTGGTGCCTAACGTGGAAACACCTTTGGGATCAAATTGGAGGGTGCTCTAGGGGCTCAGAGGTGGTTCTCTCTGCTTGCTTCCAGGATTGTGGGGGGAAGAGTTAGGCTTGTTAATTAGTTTCAACGGAGACTTACATAACTACCTTCACTTTTTAAATGTGTGTGGTTCTCTGTTGTTTCATGTTGTTTTATGTAATCGCACAGAATCCAAGGAGGCTGAGTAGTTACCTAGCAGTGTCTATGCTCCTTGTCTGAGTTTTTAGGACACTGGGAGCATCGTGGTGGGGTGGGCTGGGGTTCAGGGCCACTTCCCAAGCCAGCGCTGGGGGCGGAAGCTCCTTCGTAGGAGCCAGTGGGTGGGGAATGCTCTGGGCACAGCTGGACGTCGGTGGTTGAAGGTCCAGGTCTCCGGTGGTGTCTTCTCAGTGAGGACATTGCGAGGTGAGTTTTCCCCTTTTGTTGTTCAGTCGCCAAGTCACGTCCGACTCTGTGACCCCACGGACTGCAGCATGCCAGGCTCCCCTGTCCTTTACAATATCCCGGGTTTGCTCAGACTCACATCCATTGAGGCAATGATGCCATCCAACCATTTTGTCCTCTGTCATCCCCTTCTCCTCCTGCCTTCAGTCTTTCCCAGCATCAGGGTCTTTTCCAATAAGTCAGCTCTTCTCATCAGGTGGCCAAAGTATTGGAGCTTCGGCGTCAGCATCAGTCCTTCCAATGATTGTTCAGGCTTGATTTCCTTTGGAACTGACTGGTTTGATCCTTTCCTCTTTTCAGTTCAGTTCAGGCGCTCAGTCATGTCCGACTCTTTGCGACCCCATGAATTGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACTCAGACTCACGTCCATCGAGTCGGTGATGGATGTGAGTCTGAGTGTCATCCAGCCATCTCATTCTCTGTTGTCCCCTTCTCTTCCTGCCCCCAATCCCTCCCAGCATCAAAGTCTTTTCCAATGAGTAAACTCCTTGCATGAGGTGGCCAAAGTACTGGAGCTTCAGATTTAGCATCATTCCCTCCAAAGAACACCGAGGACTGATCTCCTGTAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGGACTGTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATGAATTCTTCAGCGCTCAGCTTTCTTCACAGTCCAACTCTCACATCCATACATGACTACTGGAAAAACCATAGCCTTGACTAGACAGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTCATAACTTTCCTTCCAAGGAGTAAGCGTCTTTTAATTTCATGGCTGCATTCACCATCTACAGTGATTTTGGAGCCCCCCAAAATAAAGTCAGCCACTGTTTCCACTGTTTCCCCACCTATTTCCCATGAAGTGATGGGACCAGATGCCATGATCTTAGTTTTCTGAATGTTGAGCTTTAAGCTAACTTTTTCACTCTCCTCTTTCACTTTCATCAAGAGGCTTTTTAGTTCCTCTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGATTATTGATATTTCTCCCAGCAATCTTGATTCCAGGTTGTGCTTCTTCCAGCCCAGTGTTTCTCTTGACATACTCTGCATATAAGTTAAATAAGCAGGGTGACAATATACAGCCTTGACGTACTCCTTTTCCTGTTTGGAACCAGTCTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATACAGGTTTCTCAAGAGGCAGGTCAGGTGGGCTGGTATTTCCATCTCTTTCAGAATTTTTCTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTTGGACACGACTGAAGCGACTTAGCAGCAGCAGAATTTTCCACAGTTTATTGTGATCCACACAGTCAAAGGCTTTGGCATAGTCAATAAAGCAGAAATAGATGTTTTTCTGGAACTCTCTTGCTTTTTCGATGATCCAGCAGATGTTGGCAAGTTGATCTCTGGTTCCTCTGCCTTTTCTAAAACCAGCTTGAACATCTGAAAGTTCGCGGTTCACGTATTGCTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCATGTGAGATGAGTGCAATTGTGCAGTAGTTTGAGTATTCTTTGGCATTGCCTTTCTTTGGGATTGGAATGAAAACTGACCTTTTCCAGTCCTGTGGCCACTGCTGAGTTTTCCAAATTTGCTGGCATATTGAGTGCAGCACTTTCACAGCATCATCTTTCAGGATTTGAAATAGCTCAACTGGAATTCCATCACCTCCACTAGCTTTGTTTGTAGTGATGCTTTCTAAGGCCCACTTGACTTCACATTCCAGGATGTCTGGCTCTAGGTGAGTGATCACGTCATCGTGATTATCTGGGTCGTGAAGATCTTTTTGTACAGTTCTTCTGTGTATTCTTGCCACGTATTCTTAATATCTTCTGCTTCTGTTAGGTCCATACCATTTCTGTCCTTTATTGAGCCCATCTTTGCATGAAATGTCTCCTTGGTATCTCTAATTTTCTTGAAGAGATCTCTAGTCTTTCCCATTCTGTTGTTTTCCTCTATTTCTTTGCATTGATCGCTGAAGAAGGCTTTCTTATCTCTTCTTGCTGTTCTTTGGAACTCTGCATTCAGATGCTTATATCTTTCCTTTTCTCCTTTGCTTTTTACTTCTCTTGTTTTCACAGCTATTTGTAAGGCCTTCTCAGACAGCCATTTTGCTTTTTTACATTTCTTTTCCATGGGGATGGTGTTCATCCCTGTCTCTTGTACAATGTCACGAACCTCAGTCCATAGTTCATCAGGCACTCTTATCTATCAGATCTAGGCCCTTAAATCTATTTCTCACTTCCACTGTATAATCATAAGGGATTTGATTCCTCTTTTACCTCAGGCTAAAACTTACGTTTCTGCATCCTCCCTTCACTTGTGATTTCCTCACCTGGGGTTTTTCCAGTGGTCATGTATGGATGTGAGAGTTGGACCACAAAGAAGGCTGAGTGCTGAAGAATTGATGCTTTTGAACTGTGGTGCTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAAACAGTTAATTCTAAAGGAAATCAGTCCTGAATATTTATTGGAAGGATTGATGGTGAAGCTCCAGTACTTTGGCCACCTGATGTGAAGAGCTGACTCATTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCGGGAGGAGAAGGGGCTGACAGGATGAGATGGTTGGATAGTGTCACTGACTCAATGGACATGAGTTAGAGTGAGCTCTAGGAGATGGTGAAGGACAGAGAAGCCTGGCGTGCTGCAGTCCACGGGGTTGCAAAGCGTCGGACTCGACTGAGTGACTGACCACCACCACCACCTGTAAAATGGAGACGATGACGGCTCTTCCTCAGGGGTGGCCGTGGCTGACTCAGGTGGAGCGTGTAGGGCAGCGCCAGGCCTGGGAGCGTGTGCTGCTTGTTGACTCTGAGGAGCAGCGCAGGACGGCGTCAGTTCTCCCACCATCGATTTCTGAGAAGCAGCTTCTGCCTCCAGGCCTGGCTTCCCCGTCTCCCTTCCCTGGCCTGCTCCCTGTTTGTAGGCCAGCAGTTAGGTGAGACGTCGCCACTGGAAACGTGAAGCCTTGGCAGGAAAAAGGAAAACCAAAAACAAAATTGTTCTATTCCCCTTACATACATCACGGGGGAAGTAGGGACACACGGTTTCCATACGTCACGGGGGACGTGGGGACACATGTTTACATACATCACGGGGGACGTGGGGACACATGTTTACATACGTCATGCGGGAAATGGGGACACATGTTTACATACATCACGGGGGACGTGGGGACACATGGTTTACATACATCACAGGGGACGTGGGGACACACGGTTTACATACATCACGGGGGACGTGGGGACACACGTTTCCATACATCACGGGGGACGTGGGGACACACGTTTCCATACATCACGGGGGACGTGGGGACACACGTTTCCATACATCACGGGGGACGTGGGGACACACGGTTTACATACGTCACGGGGGACGTGGGCACACACAGGTTTGTCTTCGTTGTCTTTTATGTGCCTTTAGCCCCTTTGTTAGTTTAGCAATATAGAAGGACATTTCTTTTGTAATTAGTTGAGTTGGTACCTAAAGCTGTCATTTAAAAAGTAGTTTTATTTAGTTGCCAGAGCTGGGTCTTCACTGCTGCACGGGCTTTCCTCTGCTTGTGGCGGGTGGGCTTACTCCCTCGTGCCCTGTGCGGGCTCTCGTGGTGGTGGTGGTGGTGCAGACTACAGGCTCCAGGCCACAAGGGCTTCAGTAGTTGTCACTCCTAGGCTCAGTGGTTGCGGTTTCCGGGCTGTTGGCACAGGCTCAGCAGTTCTGATGAACTCTCAGAACTGTTACTCTCTTACTTAGTTCTTAGTTACTCAGTTGCTTAGTTACTTCCAGGCATGGTCTTCCCATAGCACTGATCGAACCTGTCTCTCCTGCATTGGCCACCGAGCCCCCAGAGCAGCCCTGAAGCTGTCCTTTTTTGATACCCAGTGCAGTAACGTGCAGTCGTACTGGGGAGCACAGGACGCCTGTCCTGCGGGTGAGAAGTCCTGGGGCTCCCGCTTCCTGTGCGGGAAGTGCACCACAGTCCTGGGAGGGCCGGGGAGCCTTCCCTTTCTGTCCTGCCTTCCTCATGCTCATCCTGCTTGGAGCTCATCCTGCTTGGAGAAGGATGATGCTCAGGGCTCCCTGTGGGGAGCAGGTGGGAAGCCCTGAGGCGGGGGGGGGGGTTGGAGGGGCCACGTGCACGCAGCAGCCCCCTCATCCACGTGCTCTGACGGCGGGTGCTGGGCTACGGGCCACGCTGGGCTCACCTCGGCCCTGCGGTAGCCGAGTGGCTGTCCACCCGCACCTGATAAGCTCTTCCGATAGTAAGCGTGAGAGCATTGTTTCCGAGTCCTGTTCACTCACTGGTTTTGACTCTGAGCCGCTGAAGATACAGGGAAGCATTTGACAGCTGCTGCTGCTGAACAGTTTTCCAGTGAAAGGGGAGGTAGGAGGGGAGGCAGGAAGTCTGGGGACCCTGGAGCTGTCTGAACGCCGCGCTCTAGGGGAGGATGGGAGGGGAACACTTCCTCGGAGGCAGGAGGCTGGCAGGCAGGGACCCTGGACTCTTGGGTGGGGCACAGATGGCCCCGGGCAGGAGCCCAGGGGCAGGGAGCTGGCTGCTGGAAGGCCTCCTGGGTCTCGGGGCTCAGAGTAGGGAGGGCGGCTAGGGTTCCATCCCCGTTTGATGGCTGTCATGAGACGGACGTGTGAGGGGCCGTGTGAGCAGCTGATGGGAGAGGCCCAGCCCAGCCCAGGCGCAAGAAGCAGCCTTCCCGGGAGGGCCATCTAAGGCCGAGCAGTGGTGAGGAGACATGTTGTCAGGGGAAAACTTCTACATGCTTTTCTTTAAAAGGCACGTTTTATTTAAGATACAGTAAGATTCGAGGCCTTAACGCTTCCGTTTCAGTACCTGAAGATAGTAAATGGTACTGTGTATCAGACAGTCTATAGTTTCCACATGAACGACAAGCTTGGTGATCAGGTCTCTGTCTTGTTTTGACTTTGCAGCAGCATTTGACATTCTTTACTCTGTGATTCCAGAATATTTCCTTTATCTGGCACTATCTATACACAAACTGTCGCCAGCCCCAGAGCCCTCCTGTGAACTTCAAATTGATTCACGTATCCACCTGGATGTCCCGTGACTTGAGCTCAGGTCCGAGCCAGAGGTCCCACAGCTCCACGCATGGAGTTGCCCTCAGACCCGTCCGCCGCGTTGCCCGTGAGGTGCGTCCGCGTCCGCTCTGCTTCGGGCTGCCCCCCTCTGCTGCAGTCCGGTGCCGACCCGCCTGGTGGGTCCAGTGGCCGCGCCGGCAAGGCCTGCGTTCCCCTGCAAGAGCTCAGCACAGTGGACGGGCCCCTCCCCGGCTCAGCGCCTTCACTCGTTTTCCATCTCATGCAGAAGGAAGCCTGCAGGCCTTGCGGCAGCATGTAGGGTCCACACGCTGGGCCCCGGTCCCCGAAGGCATCCTCACGGGTTCTCCCTTTGGCCGTTACGGCTTCAAGCGCAGTGGCTCCTGGCCCGTCAGCAGACGCACTGGGTTCCTCTGCCTCCGAGCTGAGCTGAGTGCTCCACGTGCACTCTATCTGGGGCTTCCTCCTCCAGGCTTTGCGGAAGTGTCGCTTTTCAGTCACACGCTCTCCCTGACCGTCCTGTTCACACACCCAGACTGCCGGTCCCTGCCTCCCACCCTGCTTTTTATTTGAATGCACATCGGACGTTCTTTGTGCTTCATTCAGCCTTTCTACCCACGAGGGCAGGGAAAGCTGTCTGTTCTGCTGGATTCTGCGTATTCTCACCACAAAGAACAGTGGCTGGCGTAGAGCAGGCTTTAAAAGCCGTTTATGATGTGCGGCTTAAAATCAGCAGGGCTCAGATCTCAAGAGCTGCTCATGGAGTGATGGGGGTGGTCTGCAGGATCGAGCAGGAGGGCATCACAAGCCTTTAGCAAGGCGTTGCTTTGCGGGGGTGGCGGGGAGGACTCGGCTTGGCTAGTTCATCCTGAGCTCAATGTGAGTTTTTGCACTTTGAACAGTTTCTGCACCAGAAATGCTACCTGCAGATAATCTGTATTTGCCAACTCAGCAAGGCAGGTGGTTGCTAACAGCTTGACTGGTGAATTCTTGTGAATTTAAAAAAAAATGTAAATTGAGGGACCTCCCCGGTGGTCCAGTGGTCAAGGCTTTGCAATTCCAATGCAGAGGGCTCAGGTTTGATCCCTGGTTGGGGAGCTAAGCTCCCACACGCCATGTGGCCAAAAAATAAAGTTTTGAAAAAAAAAAGTATCTATTAAAAAATGTTAGTTGAAGAGGGTTAGGTTGATCATACTTCTGAGTTCATGGTAAACTAGTCACTATTTCATTTAAGTCGTTTGTCTGTAGTTACTCTTTTTATCCCATCCTCATTCTGTTCCATAGACAATACTTCTAATGTGTTTAAAATGTATTTTTTTTTGATACATTTTTAAAACCACGTAACAGTAAGTATCAGGGGAACTACTGCTCCCTGCCGTGAGGGTGGCACTCTTGATCACTGGGACATCAGCTTCACAGTGGATCTGAAGCAGTTTACAAAGACCACGCACAAACCTGAACTGAAGAATATTGTGTTAGAGAAAGTTCTTCTTGTTGTTTCTCTCTTTGCCTGTAGCCACTCAATTTTATCAGTCTTCTTTTGCCCTTAAGACTACTCTGCTTTTAAGATGTAAAGGTGTGATTTTTCGCTTGTGAATCGGCAGGTAAATGGTATTGGGGATTAGGTCACTTGCTTTTCATTTTTTAAAAATAAAATGTCCTCTACAGTTGAGAATGTTCAGATTGGGACTCAAAACAAAGATCTCTTAGCGCTCTCTCAAACTGTGTTCTAGACCCAGTGATGAGGTGGCTTTCTGTTTTTTGAGACAGTAGGATGCTCAGGCAGAGGCCTGTTGTGGCTTTAAAGGTAAGGGGGTCTTCTCTCGCCTGTGCTCGAGGGCTCATGGCCCACGCTGGGCTCCAGGCCACGGGTGCAGGGCCTAGTTCTTTAGGAGCTGCAGTGGTTTTTCTCAGACCTTTGTGTCCCTCTTCGAGCATCTGATTTGAAATCTAACCTCTCTTGAATCTCTGTTTTTAAAGCACTGACAAGGGGTGGCCCTGAATGTGTGTTGCTCAGTCGTGTCCGACGCTTTGCGACCCTGTGGACTGCAGCACCTCAGGCTGCCCTGTCCATCACCAACTCCCGGAGCTTGCTCAGACTCATGTCCTTTGAGTCGGTGATGCCATCCAATCATCTCATCTTGTCCCCTTCTCCTCCTACCTTCGGTCTTTCCCAGCATCAGGGTCTTTTCCAGTGAGTCAGTTCTTCTCATCAGGTGGCCAAAGTATTGGAGCCTCAGCAACAGTCCTTCCAATGAATATTCAGGTTTGATTTCCTTTAGGACTGACCGGTTGGATCTCCTTGGAGTCCGTGGGACTCTCGAGAGTCTTCTCCAGCACCGCAGTTCAGAAGCATCAGTTCTTTGGCGCTCAAGCCACCTTTGTGGTCCAGCTCTCACATCCATACGTGACTGCTGGAAAAACCATAGCTTTGACTAGACGGAGCTTTGTCGGCAAAGTAACGAGCATTATGGGGTCTTCGTTAGCTTGCTGGGTTGAATGCATGCCTTCAAGCATGCCCGTTCCCCAGGTCCTAGAGGAAAGGCTGTGTTGGGGGCAGAGCACCCTTCCAGGGGTGAGGGTGGAGTTCACACCCTGAAGGTCTCGGCAGGCAGAGAGCCTTGCAACTTGTGAGCAGACTTGCCAGCGTGGTGCAGACCCCACTGCAGGAGAGTCTTGCTGTAAAGGCTGGGTGACAGGACCTCCTGACCAAGGCGGTCTGCAGCCTGAGCGCAGCACCTGAGTTCAAGTGCCTTCACGGCCCTTGCGTGTCTCTTGGAGTCAGCGTGGGCACTCAGGGAATACTGCAGCCTGTGGAAAAGTGATTTCCCAGGAGCAGTGAGGACTATCTGGTGGGAGGGCAGTGAGACCCGCTCCCTGACACCTGTGACATCCCGGAGTGGCCTGGGGGCTTGTGGACACAGGTGTGTCACACAGATGCCAGATGCTGGGCCCGATGTAGGGGGGCGGATGGGAGCTCCCTGCCTGGGGGCAGCATCTGTGGGGAGGGTGGGGGCGGACAGCGCGTCCTCAGAGCACTGGGGTCGAGGGAGCCCAGGTGGGTGGCGCATCCGTCTGGGTGTGGGGTCAGGAGATGCCCCGGATTCGGCCCCGGGGCGGCGGGAGGACTGGGCTCCACACAGTCAGCCTGGACTCACCTGCCTGTTGCCATGCTCCGGTCACCCGAGACTGTGTGTTTGGTGGTTTGAATTGCGATTGTCAACAGTCTTTTAAGGGAATGCATAGCTGTGTCTCACTTACTGTTTTCACCTGATAGTTTTAAATATGAGATCAGTTTCCTGTGATCCACCGTCAGATTTACTTGAAAACTGTACCCTGTTCCTTTTGTGGCCCCTGCCGGGAGGAACGTGTGCAGCACTCCTCAGACACCAGGTGCGTGCGCGTCGATTCAGTTATACGTTTCCGTTTGCAGTTTTTATTTCCCACCAAGCGAAGCTCTGCCTGCCTTATTGACTTAACGTCTAGCGCCTGCCTCAGAGTGATAATGAGCACAGAGTAGGTTCGTGATAAACGCATTGCATGCAGTACGGTGTCTAATTCGGAAGCTGTGTGTTGTTTGAGATTCTTTGTGAAAGCTGATCATGCTGTTTTAGAAAATGTTTGAATTGACCTTCAGCGTGAATGCAGGCCAGAGCCCTTCCACCAGCTCCCCCCACTCCCAGGACTTGAAGTGTGAAAGGGCCTAAGCTCAGGAGCGCCAGCGAGGATCGGCCCTGAGCCAGGGTTCCGTCGTGGAACCTCTGGGACCTGACGCCCCCTCTCTCCCCCAG
Seq C2 exon
GATCTTCACTCTCTACAGCAAGTCCCTGCCCCTCGACCTGGCCTGCCGGGTCTGGGACGTGTTCTGCCGAGACGGGGAGGAGTTCCTGTTCCGCACGGCCCTGGGCCTCCTTAGGCTGTTCCAGGACGTCCTGACCAGGATGGACTTCATTCACGTGGCGCAGTTCCTCACGCGGCTGCCGGAGGACCTGCCCGCCGAGGAGTTCTTTGCTTCCATTGCCAGCATTCAGATGCAAAGTCGAAACAAGAAGTGGGCTCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000005493:ENSBTAT00000039389:11
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0056613=RabGAP-TBC=FE(15.8=100)
A:
NA
C2:
PF0056613=RabGAP-TBC=PD(19.7=51.7)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]