DmeEX6015833 @ dm6

Exon Skipping

Gene

Description

The gene Laminin B2 is referred to in FlyBase by the symbol DmelLanB2 (CG3322, FBgn0267348). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is 3L:9614914..9623980. Its molecular function is unknown. It is involved in the biological process described with 11 unique terms, many of which group under: anatomical structure development; cellular process; system development; cellular component organization; biological adhesion. 17 alleles are reported. The phenotypes of these alleles manifest in: organ system; germ layer derivative; extracellular region; pericardial cell; embryonic pericardial cell. The phenotypic classes of alleles include: viable; lethal - all die before end of pupal stage; phenotype; increased mortality during development.

Coordinates

chr3L:9622423-9623980:+

Coord C1 exon

chr3L:9622423-9622759

Coord A exon

chr3L:9622817-9623117

Coord C2 exon

chr3L:9623179-9623980

Length

301 bp

Sequences

Splice sites

3' ss Seq

TTCGTAAAATTTCTTGACAGGAT

3' ss Score

6.32

5' ss Seq

TGGGTAAGA

5' ss Score

8.91

Exon sequences

Seq C1 exon

AGCTGAACAGCAGCAACTGGAGGACATCGAGCTGCTAGAGCGAGCCAAGGCTGCCCACGACAAGGCTACCAAGGCAGTGGAACAGGGCGACAATACCCTAAAGGAGGCCAACAATACCTACGAGAAGTTGGCCGGCTTCCAGTCGGATGTCCAGCGCTCTTCTGAGAGTGCGGAGAAAGCCCTGCAGACGGTGCCCAACATCGAGAAGGAGATTCAGAATGCGGAAAGCCTGATCAGCCAGGCGGAGGAGGCTCTCGATGGAGCCAATAAGAATGCCAACGAGGCCAAGAAGAATGCCCAGGAGGCGCAGCTGAAGTATGCCGAACAGGCTTCCAAG

Seq A exon

GATGCTGAGCTGATCCGCCGCAAAGCCAATGAGACCAAGGTGGCTGCCCGCAATCTGCGCGAAGAGGCCGACCAACTGAATCATCGCGTGAAACTCACCGAAATGGACATCTTCAAGCTGGAGGAGAGCTCGACCAAGGACGACAATCTGGTGGACGACGCCAAGCGAAAGGTGGGTCAGGCCAAGGCCGATACCCAGGAGGCCCAGAAGCAGATCGAGAAGGCCAATGCCGACCTGACGGCCATCAAGGATGAGCTGGAGAATCTGAAGGACATCAACACGGGCGATTTGGATAGATTGG

Seq C2 exon

AGAATCGTTTGGCCACTGTGGAGGGTGAGATCAATCGCGTCAACCTGACGGGACGCATCGAAAAGTACCGGGAACAGCGCACCATTCAGAAGAATCTGATCGACAAGTACGATGCCGAGCTGAGGGAGCTCAAGGATGAAGTCCAGAATATTGGACTTATTTCCAAGGCTCTCCCCGATAGCTGCTTCAGTCGCAATCGCCTGGAACCCTAGAGCTCTGCGAACAACCCCACTTCCCATAACAACTACTTCAATTTTAACTAAGAACGAAGATCTGAGACGAGACGAACAAATCAGATTTATGATAGAACGTAGACGTTGAATGAAATTATGTAATTTTAGTGCCTTAGCCGAAATATTCTGTTTAGTGACCCAGCCCAAGGATCCAAGGATCCACAAAGGAGACCAACTGAGCAACGTTAAGCTTTAACGCATCATCGTTCGCCTACTGTATGCCATATACTATAATGATACAACGGATACAAGAGGATGGATGATGGC

VastDB Features

Vast-tools module Information

Secondary ID

FBgn0267348-'19-11,'19-10,20-11=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref, Alt. Stop)

No structure available

Features