GgaINT0126525 @ galGal3
Intron Retention
Gene
ENSGALG00000000977 | SIN1_CHICK
Description
NA
Coordinates
chr17:10385703-10401440:-
Coord C1 exon
chr17:10401331-10401440
Coord A exon
chr17:10385811-10401330
Coord C2 exon
chr17:10385703-10385810
Length
15520 bp
Sequences
Splice sites
5' ss Seq
CAGGTGGGT
5' ss Score
8.56
3' ss Seq
CAAGTTACTTTATGTTTCAGGTC
3' ss Score
9.15
Exon sequences
Seq C1 exon
AAACGCTGCTCATGGATTCTCACTTATTCAGGTGGACAGTATGAAGGTCACCATGAAAGATATCTTGCAAAAAGCCTTAAAGAGAAGGAAAGGATCACAGAGAGGCTCAG
Seq A exon
GTGGGTTATTTATTGCATTTTTTAGAGGATAGAGTGCCTTTTCCTGAGGGTATTTCGTATCACTTTTTAGCTGTTGTGAAAAATGCACCATTTCTTCAGTGAGTATTGTGATTTCCAGCACCACTCCAAAGCAGTTCTGTGCACAGGTCTGTGTTCTAGATGCTGCCAGAAGGCGGGCAGTGGAGGAACTGCATAACGTTTGCTGCAAAGCAGTGTATCCATTACTGCAGATATTTCTTTATGGTAACAAAACCGTTTGTGCTCAAGTGCAGCCAGTGGTAGCTTGAGATGATGGGAGGCATTACGGTAAGGTCAGTCCTTGATAGAATTGTTATGCTTCTAATTTATGTAAGAAAATGATACCTGATATGAGTTTAGATGGTTTAAATAAATAGTTGTTACTTTTAGAGAAAAAGAAAAAGTGACTTTCCGCAGTGTTGTCAAAATAGTGCTATCATAGTTAAGACGTATCAACATTTAAAAGAGGAAAATTTACAGTACTGGCATTTATGTTTTACAGCAGTGCTTTTCCTGGATATAAATATACATTCACATATATATTAGTACATGTATTTCAGAAGTGTAAGGCTGAGAGATCTTTCCAGCAGCAAGGAATAATTACTGTGAGAAATTGCACTGAGCTTTGTCACGCAACAAAGGAACTTTAATATAAACCTATCTATACACTAGGTAAAGATACAGATCTTGTCTTTGTAAATGAATGAAACCTCCTTATATACCCTTAGTTTTAACCATGTGAAAAGAAAATAAACCCCGTTCTGTTTGAAGTGGTAGTTTGGTGCAGTTTTTAAACGAGTATATAATCTGTCACGGATTTAATTAGCTATCTTCAGATGAAAGCTGAAGTTTTAATAAAAGTTAGAAGAGATAACACAGCGAAGGACACGGATGAGCTGTCTCAAGGCCATATTCCAAGGGAACGATAAGAGCTGTAAAAAATGGCAGAGGAGAGCAATTGAATGAAGCAATGAAAATCTGATTCTCGTAAAAGGAAAAAAAAAAAAAAGCCCAAGCAGAGCAGTGCTGTGTGCTGGTGGGCGCGGGGCTGAGCCCTGCACGGCTGCGAGCTTTGGCTGCTGGCCAGGAGCCATTGTTCACCCTCTGCTGCGGCGGCTCCGTCCAGATGTGCCAACTGCACGTCCCGGCTTTTGCCAGCTGACTGCGCCGTTTGATAACCGGCTCTCTGGATGCCCATCACTGGCCGCAGAGATAGAATTAAATGATGATGATCTTCCCACAAGTTGGGAGAGGAAACAATGCATATAAATCTTGATTTCATCTCAGCGTGAGAAGTCTTTATCCATCATCACTCATAATGAACAAGTCGTTAGCTGCGATGAATGGTGTTCTGTTTTTTTCAAACACCTCTTTTGTTCACTTTTTGGGTGACTTTTATTTATTTCTTGGGGTCAGATTTCTCTTCCCCGAAGGGAGGTGTCTGGAGGATTCACTTAGCTCAGTATTTAAACTACTTTCCCCCTTCGTGTAACAGATGTTATTCTTCGTCCATTTGAAATTTCTTCTTGCTGTTATTCTGTTATTTTGTTTGGTCGTTTAGAAAAGGAATGGAACTGTCATTCATTCCTTCAGCTGATACATAAACTGCTTTCGTGGCGCTTTTGTCAGAAACCCTTTGTTGTAAAGGGACGTATTGGCATAAATGTCTTTTGTTTGTTTGTTTGTTTGTTTGGAGGGGGGGGAATAATATGAGAAATACTTTAAGCCTTGTTTTATAAGTAAATTATCCACGTGACTTTTCACCTCTTTGAAACATGACCATCATCAATGCTGGGATGTAAATCACAGCAGAATCCGCAGCTGAACATCTTTGGATCACTGCACGTGTGTTTACTTATGAACCTGTCATGCACTCTGTTGAGAGCAGCGGCGCTGCTTGCAGGTTGTGCTTTAAGCTCGTGGGTGGACGCAGCCAGAGCTGCAGCTGTCAGCTCCGTGAGCTGCAGTCACTGCTGGGCACACGGTGGCTGTGGGAGCGCTGTGCTCGGGTTCCCGTGTTACTGAGCCTGGTAAAACAAATGCTTTTTATTTTGTATTTTTTACATGTTGCTGAGCGCTCATAATGCAGTGCTGGCATTGTGTGACGGTGCCACGTGGGTGATGGCACCTCCCAGACTAGGTACTGATGTATTAAATTGGTCAATCATAACTTAAACTGTTTTATTAAAAAATTCCCTTATCCAAAACTTCCCTCATTCCCAGTTACTGCAATTCATCATTCAGCAGATTTTAATTTATTTTTTTGGTCTCGCCTGTCATTTTTTAAAACAGCAGAAACTGCAGCTGTCTGCACAGACGGGTCCACTTGCTTGCACTGCCCTCTGGACCTGGAATGAGCCTTTTTCCATCCCCTTCTGCTGCTGTTGGCAGAACGGGATAGAAATGCCACCTAGATTAAAGGGCAGTTACACCTCAGGATGCACACACTGACTGAAGCAAGCACAGAGAAGGATTTTTGTCACCACTCTTCATGTAACACCAAATCCTTCATTTTGGGAGTGAATATACCTCTTACGTTCAGTGGGAGATACACAGATGAATGGAGTTTGAGATCAGACTATTAGCAGAGTGAGGTCCCATGCCTTTGTCGTTCAAGTCATTATTAAGCAGTGGATTTGGATGTCAGAGTTCTGAATAAAAGATGACATAATTTAGAAAAAGTATTACTCCTCATTCAGCAACACTTTTTTCTAAGTTGATTGTTCTGATTCTTATTGCTACAAACCAAATTATGAACCATGCCTATGAACTTTTCTCCATATTCACTGTGCCTGCAGGTCAGTCCTCACAGGACAAATGAATTTATTGTGTTTACAGCTTCGTAAACGGGACCTACATTTATAGGAAAGTGTAAGCCTCGGCTGGCTGTTCTGAGAGGAGGAGAGCTTAGATATTAGACTAGCTTTCCCTGGCTATTTTATTCAGCTAGGAACCTGTAGCTTACAGCAAGGCCTTTCAACAAGCAATTGATTCGTGTGTTCCTGAAAATCCCTGAGCCCTCGGTCACCTCTGCGAGCCCATGACCTTCTGAGCTTCTCAATTTCGGTTCTTTGTTTTAAAATGCCATTGCTGTCCTTGCAGCGACCAACCTTTGCTTGTGGAGCACAAGGCTGTTAATGGCAGAAGTGTCCTGACGAATGGCAGTGCAGAGCCCAGGTTGCTGTTTTGTTTCAGTATGTGCACTGGCATTCATGTAACTGCATGGTGGACTATGGCTGTAAAAATGACATTAATGCATTTGTTTCAAAATTCTATTTGTTGAAAAGACTAGAGCTGAATAAGATTTCTGATTGCAATCTAACTGCAAACCAGAGATGATTTGCTACAGGAATATATAAGTCAATACATGAGGACAGAAGTGGGCTGCGACCTTTCATTCATAGGAAGTACAATGAAAGAAGTGGAAAAAGTGTATCTGTTGTGTCCAGCTCTATTTAGATATTATGTTAGACAAAATTACTGCAGGGAATTCAAAGTATTCTATATTCTTTGCAGTTACTCTTTCCTGGTATCGCAATGCTTTACGTTGAATATATGATCTCTGATAATTTTTAACTAATAAATTTTGTGCAGATCCACAGGAGGCACAGGTGGAAAATCACCTGTTTGTGTCGTAGCTGAGAGAACCAGACCCCTGATGTCCCTTCGCAAAGCATGAGGTTGTACAGGAGCCGTGTTTCGGGGGCCTCGTGACCCATCCCACAAGAGATACCAGCAGGGGGTTAATGGGAATGCTGTATCCTTGTCACATGCCCAAATAACAAACGGGAAGAAGTTTATGTGAATGGCAGCAAGGAAGGGAAAAGCCTGTAACAAACAGTCAGTGCTACGTACTGGAGAAGATAAATCTGCAGGGGAAACTGTCGAGGCAGATGTTTAATTAGTTGGAGTCAGGCTGGATAAATCAGGATAGGAGCTGTCTGTGCAGGTATGCTGGTTTGCCTGCCTTCTCTATGGGCTGCTTTCATTGTCTTTAAAGCTAAGTGTTCTCCTTGCTTAGGAAAGAAGCAGCAAAAACAGCCATATAAGCTCGCTCTCATTGTAATGGATTCCCTTGTGTACACTCATAAAATAGAAAATGTAATTGATGTTTTCCTATGGTAATGAAAAATAACTAAGTGGAATTCTTTATCATCAGTTTGTTTAACCTATTGCATGCTCAGCAGCGTGTACTGCAAATGCGTATTTTACACAAGAGCTGGAAATAAAACACTCTTGGTTGTGGAATGAGCTCCCAGAGGAGATCCAGCGACGGACCAGCTCGAGGGAGCTCTGTAGGGTCTTTCATACAAGAGCTTTGTGAAAATAGCCAGAATGGGAGAGTAAGAGAGGAAGGGCTGGGTGCTGCCCTGACTGCAGCAGGGAGGGGGAAAAGCTGAAAGCCCCACAGGGCTCTGCAGGGCCTCACGTGGGCCTCACTGGTGTGAGTGGAGCTGAGGTGCCGTGAACAGGGCTCCATAGAGCACCCTGAGACGCACAGATGATTCCAAGATGGCTTTGTATCAACTTGCCATGTCTAGGGATCTTTGAAAACATTACTGAACATTGCGAGCACTCCAGCAGCTGAAAGTTTAAGTATAAAGTTGGTCTGAAATGCAGCAGATTCATGGAGAGGGAGTCATGTGCTTGAGATCATGTGTAAGAACTCCTCGTTCTTCCTAAATTTATCAGTGGAAATGTCAGATACAGCGCTGCCTGGAATTTGGAGAGAAAAAATGATGGAGTCTTGAAAAGCCTTTTTATAAGGTGAGATTTGGGTGGTGCAGCACTTGGTATAGTTCTACTCCTTAGAAATCAGTGAGAGTCTTAATATTAACTTCAGAAAGGAATAGACTTCAGGTATGCTTTTATGCTCACGTCCTCATGTTTTGCAGAGGGATCCTGCAGACGTGCAGACCCCGCTGTGAACTGTAGAGTATTGGTGTCAGTGCAACTGCTGCTTCACTCCACAGCTAAAACACCGTTGTACACAGTCAATCCTGAGTGTATTTCTACTGGTCTTACTTTTCACGTTTACTGGTCTTACTTTTAGCATATTTACTTGTTAGCCACACTAAGAATTCCGTGTAGGGCAGAGGTGCTCATTAAAGCCGGCTCGTCGGGAGGGCTCTCATGCAGACCAAGTTGTTCCAAGGTGGTGGGTGCAGAGCCTCCCATGTTCAGCAAGCACAGCACAGTGCTGGGTCAGACTGCACCCCTCGAGGTAGGTAGGTCTTATCAGGCTTCTTGTATCTGCACTAAAAGCCACATTCAATAGTTTCTATAAAGTGTGTTTGCATGGCTTACAATTGTAAGAACGTGAGAAAGATGATGGCTTCGTTCTTGGTGCTTTGTATATCTTGATGCCATGGTGATTCTCAAATTAAATATGTGCAGGAACTATATGTACACTTGGAAGCTATCTTCCCTGCCTTTCAGCTGTCTCATTCCTTTTGTTCCTCAACAAATATACTCCCTAGGATGCCAGTTGCCTTTTTTTTCCATGGCTTGACTGAATGGACTATAAATACTAACATAAAATAGGACTGCAAAGAGAATATGTGTAGGGGCTTTGGTTTTAAACAAATTAAGTACTGATGTCCATTTATAACAACTGAATGTTTTCAGAAGGAAATGAGAGTCAAAACTAACCAATGTAAAATGCTGAAACATTAGAATAAGCCTTCCCATCCCTGGCCTGTGTCAGCCTCTCGTCATTGGAAATTCTGCGAGTGGAGAAGCCTTGTCTGATTAATCTTGTCTGATTTTTAGTAGAAGTTCTTTGCAGGATGAACATGCTACTGATTGTTATTTAATAGCTGCTTCAAACTGTAAACATCCCTGAACCAGAAATGCTCAGTCCTTTTAAGAACAAAATGCGACACAAGTTTAATTGCTATAAACAGTATCTTCTGCCAACATTTCACAGACGTGACCTGTATTTTCCACAGGTTAGCCTGAGTTATTAGCACAGTATTCTGTTCAGTTTGGAGAAAGACTGGTGCTTTTCTATAAATGAAAACAGCTGCTTTACAATAACATTCGAGTTCCTAACAGCTGTCAACTATTGCTTTGTGCATTCTTTAAAATATGTAAAGTGACCAAAAATAGTCTAAAATAATCCTCCTAATCTGGATAAGTGTGTTATCTCACTGCCAAAGGAAACTGAGTAATAAAGAGAAAAATTTGAGAAGCTGGAATAGAACGTGGGGCTAAAAGCCTTCATTAGTGCTGCATTTCGGTCCTGCGGTGGGGTCGGCCTGGCTGCCCCTCGTGGCTCTGAGCTGCCATCAGTGGGTGAGAGCTGTGATGGGCACAGAACTGCGTTGTGTTGCATTTAACTTCTGTTTGCGCTGAGCTCTTTGGTTATCCTTCAGAACCTGGGCAACAGCTCACAGGAAGGAGCACTGAGGCACATGTGAAGCTTCTTTTTCATTTCGACAGCAGTGAGGGAAAGGGTCTGAGTTTTGTTGGAAACCACATTCTAACAAGTAGTTTCAGCACCACTTTTAATGTCACATTTCCTAATTCAAACATGTTTCTGAAACAGTTTATTAACACATTTTATTCAAAACTTGCAGCAGATATGCAAAAGCTACAATACAAAGATATGGTTGTTCTGAAGGACCACATATTGCCAAGTGCCCTTCCAGGCCCCAAGGAACGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGGGAGGGAGGAACAGGGGATGAAAATAAAGCCTGGAGTAATGGAGAGATAATAGAAAGGAGGAGAATTAGGAAGGTAGAAGAAACCGCCTAAATCCACAGCCCTGCGATTAAAGTGTTTTTAAGAGATGAACCATGATTAGAATAAACTGTCACTTAAGTCGGATGTTGCTGTTGAAGATGGTAGCTGAGGAGCTTAAAATTAAAAGTAAATATGTTAGAGTAGGCGACGCATATGTTTGCTCTGACTCTCAGCGATGGAAGCCTCAGCATCTGTGACAGTGAAAAGCCAATTAATTTGTATTTTCTTGTGCTTGCGTGCGTGCTCTTCTGCTTAATGGTAGTTTTGAGTTTCTTTGGCTTTCAGTGCTTTGCTTTGGGTAATTATAGCATCCCTGCGGAGTTTGCTGCCCTCAGTTGTGAATGGCTTTACCTGGAAATACTTCAGAAACGCTGTTTTTCTTCACTAAGCTGTTAACACTAGCAAGATACAAATTTAAAACCACCAATATTCATAGGTCCTCAGCCAGACTTTCTCCTGCTGGCTGCTCCCCTCTCACCAACAAAAAAAATACATTTAAAAGAATAAGGAAAACACTTTGGTTTAAGTGCACGGCCTCCAAATGTCACAGCTTTCTCCTGGGTGTGCCTGTCCCATTGCCAGGCGGAGCAAGGAGCTGGCTGGATCGTTCAGCAAAGTGTCCTCTGGAGTGGTGCTGTGCAGGGCGAGCACCTCTGTGCTGGGGAGGGTGGGACAGAGGCTGCTTGAAACGATTTCCATCTGCCAACAGAGGCGATCTGTTTTGCAGCAGCAGTGATTGATTTCACTGAGCCCTTTCTCCGAGCGCTGACGCTGCGCAGGCACGGACGTGGCGGGGGACGGGCTGCTGGTGGACGTGGAACAGCTCACGGGGAACAAAGTTTGTGAATAGTTTGTCAGAATAGACATAGCTCGTTAGTCCTGTGCGTTTGGGCTGATGGGATTCTGGACATCAGCCCAAATCGTGGAGGAAAATGTTTCACGTCTGGCCTCTGAAATGAAAGTGAAATATAGAGTTGAATCTCTTCCAGAGCTGTTGGTATTGAAATCGCACAGTTATTGGTTGTTCCGGGTTGGTGATAAAGCCATAATTTATGTGACATTTTAAATTCTACAGTTCAGCGTTTGAATGATAGAGGTTTTTGTTTATTTTATCCTCTGATGAGAGAAGACACCACTGTTACATCAGGTACGTTTGTGGGACCATCTCATTTGCTTTTGGGGCGCTTGCGCAGCCCCCGCCGGGCAGCCGTGTTACCTGTGCTGTGTGCTGATGGGTGGGTAACCAGGAGAAAAGCACCTTTCTCACCTTGAGAGCCACGTTGGTAACAGAGACCGTGTGCCGATGCACAGCCCGGGCTGCGGCTGTGTTTGGTGCTCTCAGTGGGCAGCAGCTGCAGAAGGGCCTGTGCTGTGTTTGCTGCAGCCTGCAGCGCTGGCGCTGCCCTGAGCACTGCTTATCTCCCATGATGAAATACTGTGTGTGTGCTGTTGTGTTTTGGCCATAGGTACCTTATGCTATAGGTCAAAGGTGATGATTTCTTTCTCCTGTCAACTTTATTTAGAATGACATTGCTAATGCAGGAAGAATAAAGGTCTGTAGTAAAAATTGAATATTTCTGTGATTATTCCAGACCGGTTTGCTGCAGAGCTGCATGCTGTCTGCCTTTCTGTTCTACAAAAGAGCAATACGTAAACGAAGTGTGTTTGTTCCTTTTTAGGGGCTTGTGACTAAATTCTTTAATTTCACTGGCTGTCAAGGTAGTGTTAAGTAAAATGGGTTTGAACTGCTGTAGTTTTTGTGTACTGGACTAGATGTCAGAAACCTTTGCCATCACTGGAAATTCTGTCACTCTGGATTTACTATCTGTTTCCCACAGCTGAATTCTTAAGCAGTGTGATTTAACACCTTGGCTCTCCATCAGCCAGTCCTGGCATTTATTTGAATGCATTACACCGCTGGTTTCCATAAACTATTTTACAATTGTTTCATATAAATGACTGTTTATTTCTACAAAAACCATCTGTATTTCTGTGGAGAGCAGCAGATAACTGTGTAAAATTTGGTCATGTCACAACAGTGCAAGTTAAGAAAAAGCAGATTGGACTTGGAGAAAAAGTCTCATGCTTGTGCACAATATTAGAAGTTTGTTTTTCACAATTCAGATATCTTTATTAACCAGTGTTTGCATTTGTAATGATAAAATCTTCTCTCCCCTTTAGAGGTGTTGAGGGGCGTTGTGGATTTTTAACAGATAAACAGACTTAAGATGTCCTCACAGCAGTTGAGTTTGAGATGTAAACATTCTGGCTTTACAGCTATTTCCTCTCGAACTGTTTACATACTTTCTGTTGCTCTGTTGTCATTGCCAAGCACACAGTGCAATCCTTGCCCTTTCTGTTGCATTCTAAGAAAAAATCACAATGCAGGAGTCCCACCGCCCCTCGCTGTTCTCAAATTTTTGCTTTCTGCAAACTATCGATCCCTCTCCTTCGACCTCTTTGTTTATAATCTTTGCTCTGTCTTACAACCAAGGGTCAGTGTCCAGTGCCGATGGGAAAGCGGTCTTCCCCTGCTGCAGTGCAGGCCGGTGACAATGTGGACAATGTGCCATCTCCCGGTGCCATCTCCCGGTGCCATCTCCCGGTGCCATCTCCTGGTGCCATCGGGGCTCTGCGCTCGGCCACATGGGTTCCTCCCCACTCCACGCACACATGGCCGGCTGAAAGCTGGGCTCTGCAGCACTGCGCTTGGCACAGCTGATGCTTTCTGACAGGCTACATGAAAGGGTAGAAGTACATAAACGTCCTCTTCTTTATGGCCTTGTGATAGCCATAGCATATTTCCAGCAATAATAAAAAAGTGGTAACAACACATAAATATAAACACAGGTTAAACTAAAAAGAAATCACACTTTCAAAACCTAGCAAAGCAGTAGAGCAGTAAATCATGCATTCTTGTGAAAGAAGAAATTTAAAAGAAGGAAGTACCACAGACANNNNNNNNNNAGCTCCGTGCTGAGGAGCAGTCAGAAAGGCCAATAGAATATTAGAAATTAGGAAAGGAGGAGAGGACGAAACAGAAAGCATTACTGCGCCCATGCTTAAATCGGAGTGCCCACATCTCGAATATTATATTTTATCTTAAAAAGGATAATGTCTCAAAAAGGATAACAGTAATAGCAGCAAAGAGGCAGAAATGTATGAATGCAAAAATGGATCTGACAGGAAATGAAGAGTGGGTTCTAAGCAGAGATCTTCTGCTAGTTTGCAAACCGAGGTGACTGGGCACAAGGGGAGGCTGTGAGGTGTGTGCGTAGAGACGGAACATTGGGTAAATTGGGAGGGTTTATCACCGTTGTTCATAAAACAAGAACTGTGTGGCACCAAAAGCAGTGGGCAGACAATGATGTTCTGAGACAAAAGGGAATTCTTTTGCTCACACAGTGCAATAAATTATGGGAGTCAATGTTATGGAAATCAGAAATTCAAAAGTGTTTTGAACAAATGCCTGGACAATAAAGGGAGCGGAAGCAGCTGACAAAAGAGCATAGCTGGAGCTGGGGCTTTTGTGAGAACTCAGGAGCTCGTGGGAGCTCAGCAAAGATAAGGGCTGAGCAGGGCGCAGTGGTGCGTTCTGTTGCAGAATAACATTAGAAATGTCGGTTCTGTTTTAAACCGTTTGGGTGGGTTTTTTGTTTTGGTTTTTTGTTGTTTCTTTTATAGTGGTGTGTTCAGGAAAGGTTAGGTTTGACAACTCCACAAACATCAGATATCACGGTAAGTCTTTCTGTAACCCTCGTTTTATCTTATTAACTTGTTTGCAGATTGAGATGGCTTTTGTTTGGAGTTTTCCTTAAAGCCTCTTTTTCTTTCTAAGTGCTACTATTTGTTTATTGTGCAGATTCAACCCCTGACCGTGGTATTCTTCATTGCTATTGAAAGTTAATGGGGGAAAAATTGCATTCCAAACATTTGAACCTGTAGTAGCCATGGCTGAACTTAGTTGATCTCTGGTGATCGGTTCAATTTAGTTACGATTTTTAGCCATTAGGCTGGGGCTGAATGATGGTGATTTGGTTGAGGCCAAATGTCTGTAGAAAATTGGCTGTTTGATAAGAGCCCTGTTATCAGAGGGGGATACTTTCTCATTTACATTTAGATGAGTATTGATTATTTATTTACTCAGAGAAGTGAGATTCGTTCCCAATCTTATCTCTCTAGTCTCTGCTTGTCAGCAGAAAGAGAGATAGAGCTCCTGACATCAGCCCAAGATAACAGCACTTTGTAGTGAAGATAAAAGTTGGAATGGGCCTTTTTCTAGTCTTGACTGAAAGGATAAGTTTTAAAAATTAGAACTGATGGGTCGTGCTTTCAAAACCCCATTCTGAAGGCTTTGCAGTTTAAATGGCAACAGAATTGGTTTGTTGTTACACGGATGGCCATTCGCCTTTTGTAGGAGAGGTGCTTAATTTGATTATGCTGTGCGATTCTTCCTGGGACGCCTTGGTGTGGTGCCATAGGAAAATAACACTACAGATGCGGTATTGCATTTTTTCTTGTCTGTTCTTAATTCCCAATAAGCCTTCCTCTGTTGTAAGGGGTATCTTGAAATAGTAAGGCACAGTAGGTGCCTGCGAGCAGAGAGCAGCCAGCAGTGGTGCAGGGGGTCGAGTGGTGCTGGTAGGGGCGGCGTGGCCGCTGTGTGGGGGCACCGTCAGTCCCACGGGTGGGCAGCAGCGCAGGGCCAGGAGCGGGCAGTGGCTGCAGCTGGCAGCCCGGGATACAGTGCAGTGCTCTGCGCCGTGCAGCACGCGGTGCACCCTGGCAGGGCAGGAGAGAGGTGCCCGGGCTGCCCCAGGGCTGGGCGTGCTGCTGGGCCTCGAGGTGCCCCATAATGCTTGGGGGATTTTTCTCTCACTGTTCTGTGGCTTCTTTCAGACAGACGCTTGGGTTCTCTCCGTCCTCTGCAGAGGCATGACTTGGCTTTTCCAGGCCCTGCTTGCTTTATCTCAGCAGCGGTTTCTCTCCCTCCAAGTGTTTGTGGCAAAGCCTGAGGACTGGAGCAGCAGCTCATAGCTGTTCCCTTGGTTCTCAGGGCAGGTCCTGCTGCCTCCAGCGCTCCTGCAGCCGCACGGAGCCTTTGCACCAGGCAGCAGGAAGCCACGGAGCCTGGCCTTGGCACTGCAGCCCGAAATGTGGTTGGAATTCCCACAGCCGCAGTCTGATAGGAGGCCATTAAATCACGTAATGTTTCTGATACAGTTACTTCGTTTGAACTCGTGAGGGACGTCTGGTAGCAAAACTCCCCTGCAGACCCAGCCGGATGGTTGCCATCTGCCGTGAAGTGCAGGCCACGTAAATGTGCACAGACACGTACTGTGTATTATTTCAGAGTAGGTACTGGAAAAATCCACGCATACTTTTCTGTGAATTTCTTCGTATTTCCTGTTTTTAAGGAATTATTCACATAGGAAGTTGCCTGAGTTTCTGAGCTCCATGGCGTGGAGGAGCAGCACTCTGTTCGGGAGCAGAACGCTCTGCACGCGGCTTTGGGGAGACGAGATGGGAAGCTGTAATTGGACGTCTGCTGTAGTAAATTTAACATTAATTGGCTAACAAATTTCATTTCTTAGGCGTGCCATCAGAGGCCAAGATACTTAATTTTCTTATGTGTTTTAAATATTTCATCGCATACTGTCATAATTCACAGCAGAAAAGTATTCAGAAGTATTTTAAATTTTCATAAAGAGGGGGTAGATTTATTTCATTATTTCAGTTCCAGTTATTTTGTTATATAAAGACCAGTGTAAAGGTCCGTATCATTGCTCAGCCTAACCAGCCTCGGGCCAGCGGGTTGCTGCAGTCCCCTCCAGCAGCTGTCTTTTCTCTAACGTCAGGAGCACAGTTTAAGGTTGGACACAGCTCGATCTGATTAAAGTAACATTGTCATCAGAACTTTGCTTCAGAAATTAGAAACACTCCTTGAGCTGTTTATAGTTTGTAAGGATTGGGGCAGGGGGGAGCTCTCGGGTTGCTCACTGCAGCCGCACTGCTGTGCCCGTTGCTGTGCTGCTGCCCACAGACGGGAGAGCAGGGCAGCAGGGCAGAGCTGTCAGCCGGGCACACAGCTCAGAGGCAGGCAGGGAGTGCACTGTCTGTGGGCTGCAGTGAGGACAGAGCCTGCGCCCCAAAACCCCGGGGCTTCTCCCTGCCAGGTCTTGGAGTGGTGTCAGCACTGTCTCCTTCAGTGGTGTGGTTTGAGAGGAAAGAAACTGACACCTGAATCTTGAAAAAGACCTATGACTACAGGAAATGTGTCTGAAAATAACTCATTTTAAGTAACAGCATCATTACGTGTTCATGTTTGATTCAGTTATATGAAATAGACTTTATCTTCAGCAGCTGTAATGTTAGCAGTATACAGATCTCTCCAAAAAGATCAAGTTCCCCCACTGAAGACCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTGAAGACCCTTCCTGCTCATTGCAGCCATCCAGCTGCTGGGACACCAGCTCCTTGCCTCCAGGCAGCCTGGGTTCCTGGTTATGGAGGGAAATCCTTCATGCTGATTAGCAGTGCAGCCTTCTGACAAATGCACTGTTGGCAAAGGTAGAAATAGCCAAATTGGGTGGAGCTGATTTTCATGACAAAATGCAGTTCTTAAAGGAAGTTACAAAAGAAGGGCTATTTCCCATATTTCACAATGCTCTGTGCAGACACCTCTGAGCTGTGTAGTGGGCTGGTGCTTTCTCATCGTGTCTGTTTGGCTGAGCCCCACAAGAGAAGCAGGCTTTGGTGCTGAGCTGGAAGAGTCACACACTGAGGTGTGCCGTGCAGCCACACAGCAGCCGTGCCCACTGCCTGGGGTGCGGAGCTGCGCCGTCCTCGGGCAGACAGCAGCCAAGCAGCAGCTGGGGATGGGTGTTCTGTACCAGAGCCACAGAGAGAGCAGAGCAGCTGGGAGCACACACTGTGCTTGTCACGTCAGGAAGACTGCCCAAGTAATACAGCATAGATACACACCAAGATCTGGATAGGAGTTTCTTAAAACAGGCAGTGCCCTTCTCTTGCAGCATGGGCAACGTATTTAATACAGGCTCAGAGTAGGAGTAGTGCAGAAGTTTTGGTTAGAATTTGGTTGGCACCAAAGCGGGTAGCGCTCCCAAACAGCCCAGCGCATCTGGAATATTTTGTCTTCTTGCACACCAGCCTCCCCCTTCTCACTATAGGGCCCTTCCCTTTGGAAAAGAACTTTGAAACATAAGTGTCTACCTGCCTTACTTTGAGGGTGTGAGTAATCTTGTAGTAGTTGAACGTGATAAGCCATCACTTTGTTAGAAAACAGATGATTTTACAAGTTACTTTATGTTTCAG
Seq C2 exon
GTCCTCAGTATCGGCTGGAGAAGCAGAGTGAACCTAATGTCCCAGTAGATTTAGACTGTACCTTGGAGAGCCAGAGCACTTTGGAATTCTGCCTTGTCCGAGAGAACA
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000000977:ENSGALT00000001443:7
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.193 A=NA C2=0.351
Domain overlap (PFAM):
C1:
PF054227=SIN1=FE(8.0=100)
A:
NA
C2:
PF054227=SIN1=FE(7.8=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Human
(hg38)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]