HsaALTA1047755-2/2 @ hg38
Alternative 3'ss
Gene
ENSG00000175497 | DPP10
Description
dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
Coordinates
chr2:115689687-115689881:+
Coord C1 exon
chr2:115689687-115689739
Coord A exon
chr2:115689840-115689844
Coord C2 exon
chr2:115689845-115689881
Length
5 bp
Sequences
Splice sites
5' ss Seq
TAGGTAAGT
5' ss Score
9.66
3' ss Seq
AATATTCACATTTTTTCAAGGGA
3' ss Score
5.21
Exon sequences
Seq C1 exon
ATTTTTCATTATTCGTATACTGCTTCATATGTGATTTACAACATACACACTAG
Seq A exon
GGAAG
Seq C2 exon
TTTGGGAGTTAAATCCTCCAGAAGTAGAGGACTCCGT
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000175497-44-70,44-69-2/2
Average complexity
Alt3
Mappability confidence:
NA
Protein Impact
Protein isoform when splice site is used (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0093016=DPPIV_N=FE(13.1=100)
A:
NA
C2:
PF0093016=DPPIV_N=FE(20.8=100)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains