HsaEX0072638 @ hg19

Exon Skipping

Gene

ENSG00000184517 | ZFP1

Description

zinc finger protein 1 homolog (mouse) [Source:HGNC Symbol;Acc:23328]

Coordinates

chr16:75186807-75206129:+

Coord C1 exon

chr16:75186807-75186864

Coord A exon

chr16:75200668-75200794

Coord C2 exon

chr16:75203151-75206129

Length

127 bp

Sequences

Splice sites

3' ss Seq

ATAACAATATGCCATTTCAGGGA

3' ss Score

5.88

5' ss Seq

TGGGTAAGG

5' ss Score

9.08

Exon sequences

Seq C1 exon

TTCTGCCTTCATAGTTCTCTGCCTTTGCCCAAAACTGCAGAAAATGAACAAATCCCAG

Seq A exon

GGATCAGTTTCATTCACGGATGTGACTGTGGACTTTACCCAGGAGGAATGGGAACAACTGGACCCCTCTCAGAGGATCCTATACATGGATGTGATGCTGGAGAATTATAGCAACTTACTTTCAGTGG

Seq C2 exon

AAGTGTGGAAGGCTGATGACCAGATGGAGAGAGACCACAGAAACCCAGACGAGCAGGCGAGGCAATTTTTAATTCTTAAGAACCAAACCCCAATTGAGGAAAGAGGCGATCTCTTTGGAAAAGCACTTAATCTGAACACAGACTTTGTTTCTTTAAGACAAGTACCTTATAAATATGACTTATATGAAAAAACTTTGAAATATAATTCAGACTTGCTTAATAGTAATAGAAGCTATGCAGGAAAGCAGACTGATGAGTGTAATGAATTTGGAAAAGCACTTCTCTACCTGAAGCAAGAGAAAACCCACAGTGGAGTAGAATATTCTGAATACAATAAAAGTGGAAAAGCCCTCAGCCATAAAGCAGCCATTTTTAAACATCAGAAAATAAAAAACTTGGTTCAACCTTTCATTTGTACTTACTGTGACAAGGCTTTCTCCTTTAAGTCACTCCTCATTAGTCATAAGAGAATACATACTGGAGAAAAGCCATATGAATGC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000184517_MULTIEX1-4/4=2-C2

Average complexity

S*

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

Show structural model

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.059

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=100.0)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=6.9),PF134651=zf-H2C2_2=WD(100=7.2),PF127602=Zn_Tnp_IS1595=WD(100=14.1),PF134651=zf-H2C2_2=WD(100=7.2),PF134651=zf-H2C2_2=WD(100=7.2),PF134651=zf-H2C2_2=WD(100=7.2),PF134651=zf-H2C2_2=WD(100=7.2),PF134651=zf-H2C2_2=WD(100=7.2)

Main Inclusion Isoform:

ENSP00000377080