HsaEX0072668 @ hg19

Exon Skipping

Gene

ENSG00000196670 | ZFP62

Description

zinc finger protein 62 homolog (mouse) [Source:HGNC Symbol;Acc:23241]

Coordinates

chr5:180274611-180278493:-

Coord C1 exon

chr5:180278381-180278493

Coord A exon

chr5:180276154-180276256

Coord C2 exon

chr5:180274611-180275082

Length

103 bp

Sequences

Splice sites

3' ss Seq

ACAGCTCTCTCCTTTCTCAGCAC

3' ss Score

7.77

5' ss Seq

CAGGTGAGA

5' ss Score

9.22

Exon sequences

Seq C1 exon

TGTCACATTTGAAGACGAGCACTGAGGATGAGGAACCAACTGAAGAATATGAAAATGTTGGAAATGCAGCATCTAAGTGGCCAAAAGTGGAGGATCCTATGCCTGAATCTAAG

Seq A exon

CACAAGAGGATCCACACAGGGGAGAAACCCTATGTGTGTGATAGGTGTGGGAAGGCCTTCAGGAACAGCTCAGGCCTCACAGTGCATAAAAGGATCCACACAG

Seq C2 exon

TTTCAGATGAACTCCCATAATGAATGATGAATTTGTGATGAGGGATAACCTGGAAGTGGTATTCACACATTATGCTACAATAAAAGGTTCTACCGTGGAGAGGATTTTGACACATTCAGTAACTAATGGAACACACCGTCAACATGAATTCGCACCTTACATGACAGAAGTGATTCAGGGATTCCTATGAATAGAAATGCTGAGAAGGAACGCATTTTATTGCAGAAGCTAAAAAGCTAAAGTACCAGTCATCTAGAGAGAAGGAAATTAATGTTTCTTAATAATCCTGTTAAATGTTTGATTGTTTTTGGAATGTGTTATTGTAAAGATGTCATGCAGGACATGTATATGTTGTCTGTTGTAAAATGTTAACGAATACTTTGTTCAGGGCTCACTCTCTCTTTGTCATGAAAGCCAGCTCCTTGTGGCGAGGTAAAGTGGAATTCCAATAAAGAAATTCCTTAAATCAAAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000196670_MULTIEX1-2/2=C1-C2

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

5' UTR

Show structural model

Features

Disorder rate (Iupred):

C1=0.191 A=NA C2=NA

Domain overlap (PFAM):

C1:

PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.0)

A:

NA

C2:

NA

Main Inclusion Isoform:

ENSP00000423820