HsaEX0072670 @ hg19

Exon Skipping

Gene

ENSG00000196670 | ZFP62

Description

zinc finger protein 62 homolog (mouse) [Source:HGNC Symbol;Acc:23241]

Coordinates

chr5:180275138-180287684:-

Coord C1 exon

chr5:180287528-180287684

Coord A exon

chr5:180278988-180279060

Coord C2 exon

chr5:180275138-180278493

Length

73 bp

Sequences

Splice sites

3' ss Seq

TAATATATTTTAATATGCAGGTT

3' ss Score

7.05

5' ss Seq

CAGGTACTA

5' ss Score

7.64

Exon sequences

Seq C1 exon

GTGAGTGATGATGATAAGCTCCCGCTGCAGGTGTGAATAGAGACCCCGGAGGTGCGTCCTAGCCCTCATCTGGGGAAGCGCACCTGCATACAGACGGGTGCACCGGGGAGGAGGCGACCTGCCGCGTGTTCCTGCAAGCAGAAAAGGAGTTAACTAG

Seq A exon

GTTGCCTTCTTCCTCATCTCTGCAGTAACTGTCTTCATGGTTTCATAGCCTTCTCCCTGATACCCCTCCCCAG

Seq C2 exon

TGTCACATTTGAAGACGAGCACTGAGGATGAGGAACCAACTGAAGAATATGAAAATGTTGGAAATGCAGCATCTAAGTGGCCAAAAGTGGAGGATCCTATGCCTGAATCTAAGGTTGGTGACACATGTGTTTGGGATAGCAAGGTAGAGAATCAACAGAAAAAGCCTGTGGAAAACAGGATGAAGGAGGACAAAAGCAGCATCAGGGAAGCAATCAGCAAAGCCAAGAGTACAGCAAATATAAAGACAGAACAGGAAGGTGAGGCATCTGAGAAGAGCTTGCATCTGAGCCCACAGCATATCACACACCAGACTATGCCTATAGGACAGAGAGGCAGTGAGCAAGGCAAACGTGTGGAGAACATTAATGGAACCTCCTACCCTAGTCTACAGCAGAAAACCAATGCTGTTAAGAAATTACATAAATGTGATGAATGTGGGAAATCCTTCAAATATAATTCCCGCCTTGTTCAACATAAAATTATGCACACTGGGGAAAAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000196670_MULTIEX2-2/2=1-C2

Average complexity

C2

Mappability confidence:

100%=100=100%

Protein Impact

5' UTR

Show structural model

Features

Disorder rate (Iupred):

C1=1.000 A=NA C2=0.191

Domain overlap (PFAM):

C1:

NO

A:

NA

C2:

PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.7),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.8),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.8),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=2.8),PF134651=zf-H2C2_2=WD(100=2.8)

Main Inclusion Isoform:

NA

Main Skipping Isoform:

ENSP00000423820