HsaEX0073381 @ hg19

Exon Skipping

Gene

ENSG00000166526 | ZNF3

Description

zinc finger protein 3 [Source:HGNC Symbol;Acc:13089]

Coordinates

chr7:99661656-99672884:-

Coord C1 exon

chr7:99672758-99672884

Coord A exon

chr7:99668305-99669835

Coord C2 exon

chr7:99661656-99662535

Length

1531 bp

Sequences

Splice sites

3' ss Seq

TGCATTTTTTATTGTGTCAGATC

3' ss Score

7.47

5' ss Seq

TCGGTAAGA

5' ss Score

10.53

Exon sequences

Seq C1 exon

GAGCTGGTAACCTTTGAGGATGTAGCTGTGTACTTCATCCGGAAGGAGTGGAAGCGTTTGGAACCTGCTCAGAGGGACCTCTATAGAGATGTGATGCTGGAGAATTACGGGAATGTGTTCTCACTGG

Seq A exon

ATCGTGAGACCAGGACTGAAAATGATCAAGAAATTTCTGAAGACACAAGATCACATGGGGTCCTACTGGGAAGATTTCAAAAGGATATTTCTCAGGGTCTCAAGTTTAAAGAAGCCTATGAACGAGAAGTCAGTCTGAAAAGGCCGCTGGGGAACTCCCCTGGAGAAAGACTGAACAGGAAAATGCCAGATTTTGGTCAAGTGACAGTTGAGGAGAAGCTAACCCCCAGGGGAGAGAGAAGCGAGAAATATAATGATTTTGGGAACAGCTTCACTGTGAATTCCAACCTTATCTCACATCAGAGACTCCCCGTGGGAGACAGACCCCATAAGTGTGATGAATGTAGCAAGAGCTTTAATCGAACTTCAGACCTTATTCAACATCAGAGAATCCACACTGGGGAAAAGCCCTATGAATGTAATGAGTGTGGGAAGGCCTTCAGCCAGAGCTCACACCTTATTCAGCATCAGAGAATCCACACTGGGGAAAAACCTTATGAATGTAGTGATTGTGGGAAAACCTTCAGCTGTAGCTCTGCCCTCATTCTGCATCGGAGGATCCACACGGGGGAGAAACCCTATGAATGTAATGAGTGTGGGAAGACCTTCAGCTGGAGCTCCACCCTCACCCACCATCAGAGAATCCACACTGGTGAGAAACCCTACGCCTGCAATGAATGTGGGAAGGCCTTCAGCAGGAGCTCAACCCTTATTCACCATCAGAGAATCCACACTGGAGAAAAACCCTATGAATGTAATGAATGTGGGAAAGCCTTCAGCCAGAGCTCACACCTCTATCAGCACCAGAGAATCCACACTGGAGAGAAGCCCTACGAATGTATGGAATGTGGAGGAAAGTTTACCTACAGTTCAGGCCTTATTCAGCATCAAAGAATCCACACCGGGGAGAACCCCTATGAATGTAGTGAGTGTGGGAAAGCCTTCAGGTACAGCTCGGCTCTTGTTCGCCATCAGAGAATTCACACTGGAGAGAAGCCTTTGAATGGGATCGGCATGAGCAAAAGCTCCCTCAGAGTTACGACCGAGTTAAATATCAGAGAGTCCACGTGAAAGAGCCACACACCCATTTTCCTCACTTTCCCTGAGTCTCAAGAGCTCTTGCCTTACCCTATAAATCTCAACAGCTTAGGATGTGTCCCTTTCAACTCAGACTTTTCATTTTAGAGAATGGGGCAGATGGGGCAAATCGTTGAATTTTCCCAGAAATCACACCAGCCTTAGAAAGCGTCAAGGCAAGTGGATGGCGTGCTGGGAATAGAAAGCAGCTCTGGGACCAGTTACCCCATTTAGGAAAGGAGTTTGCACTAAACTGTTTTTCTCACAGCAGAGGAACCTTTCCAAGGTGGGGATGGAAGCACAGTCGGGACAGAATTCGATGGATTCCTTTAGTTGGAGTCCGCGTAGTCAGCACAGACAGCAGTGGAAAGGACGCTCTGGGTCCTGTTATTTGCTAGGGAGGGTAAAGGGAGACTATTTCAAAGCTACTGTTCCTAGTCCAGCTTTAAGTTTCG

Seq C2 exon

ACTGGATACACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACTCTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGAGGACCTCCTGCCTGCCATGTTGCTGTGGAGCTCGCACTCCTCAGGCATCCCCTGATGTTGAGTGATACAAACTCTATCACCGGAATCGATGCTGCTGCAATGACAAGACTTCTTTCTGGTTTTCAGATTCTAAAGTTTAAAACAACGACAACAACAGGAGCGCTTGAAAGTTACGGTGCTTCTCCCTCTCCAGTGTGGACTCGCTGATGTTTGGAAAGATTGGACTTGCTACAGAAGGTCTTTCCACAGTGATGACACCAGTAGGGCTTTTCCCCGGTGTGGATTCTGTGGTGTTTATTGAAGTTGGAGCTGTGGTTGAAGGCTTTCCCACACTCCTTACACTTATATGGCTTCTCTCCGGTGTGGAGTCTCTGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000166526_MULTIEX1-2/2=1-C2

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref, Alt. Stop)

No structure available

Features

Disorder rate (Iupred):

C1=0.032 A=0.316 C2=0.000

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3),PF074636=NUMOD4=PU(48.2=62.8)

A:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=7.3),PF134651=zf-H2C2_2=WD(100=7.3),PF134651=zf-H2C2_2=WD(100=7.3),PF134651=zf-H2C2_2=WD(100=7.0),PF097235=Zn-ribbon_8=WD(100=12.3),PF134651=zf-H2C2_2=WD(100=7.3),PF134651=zf-H2C2_2=WD(100=7.0),PF134651=zf-H2C2_2=WD(100=7.3),PF134651=zf-H2C2_2=WD(100=7.3),PF134651=zf-H2C2_2=WD(100=4.5)

C2:

PF0135222=KRAB=PD(0.1=0.0)

Main Inclusion Isoform:

ENSP00000299667