HsaEX0073391 @ hg19

Exon Skipping

Gene

ENSG00000131845 | ZNF304

Description

zinc finger protein 304 [Source:HGNC Symbol;Acc:13505]

Coordinates

chr19:57865093-57871266:+

Coord C1 exon

chr19:57865093-57865219

Coord A exon

chr19:57866639-57866779

Coord C2 exon

chr19:57867398-57871266

Length

141 bp

Sequences

Splice sites

3' ss Seq

GCCCTTTGTTTGCGTTACAGCTT

3' ss Score

9.05

5' ss Seq

AGGGTATCT

5' ss Score

3.45

Exon sequences

Seq C1 exon

AGTTGTGTGACCTTCGAGGATGTGTTCGTGTACTTCTCTCGGGAGGAGTGGGAACTCCTTGAGGAGGCACAGAGATTCCTGTACCGTGATGTGATGCTGGAGAACTTTGCACTTGTGGCTACACTAG

Seq A exon

CTTTCATTTTCCCAGTCCCATGCAGTTGCGCAGTTGGAGGGGGCAGAAAACCTTGGGTGCCTGACAGGGCAGACATCACTGCAGCCACAGTAAAGGAGACCTACAGAGGGCATGGCCCTGCTGAATGGGAGCTGGAAGAGG

Seq C2 exon

GTTTTTGGTGTGAAGCAGAACATGAGGCACCTTCTGAGCAGAGCGTTTCTGTAGAAGGAGTGTCACAGGTCAGGACTGCTGAGTCAGGTCTTTTCCAGAAAGCACACCCATGTGAGATGTGTGACCCACTCTTGAAAGACATTTTGCACCTGGCTGAACACCAGGGATCACACCTTACACAGAAACTGTGCACACGTGGGCTGTGTAGGAGAAGATTCTCGTTCAGTGCAAACTTTTACCAGCACCAGAAGCAACATAATGGAGAGAATTGCTTCAGAGGGGATGATGGAGGGGCCTCATTTGTGAAGAGCTGTACAGTCCACATGTTAGGGAGATCCTTTACGTGCAGGGAGGAAGGGATGGACTTACCAGATAGCTCTGGCCTTTTCCAGCACCAGACCACTTACAATAGGGTGAGTCCATGCAGAAGGACTGAATGCATGGAGTCTTTCCCACACAGCTCCAGTCTCAGGCAACACCAAGGAGACTATGATGGACAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000131845_MULTIEX1-3/3=2-C2

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref)

Show structural model

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.027

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=4.3),PF0009621=zf-C2H2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=3.5)

Main Inclusion Isoform:

ENSP00000401642