HsaEX0073390 @ hg19

Exon Skipping

Gene

ENSG00000131845 | ZNF304

Description

zinc finger protein 304 [Source:HGNC Symbol;Acc:13505]

Coordinates

chr19:57862645-57871266:+

Coord C1 exon

chr19:57862645-57863065

Coord A exon

chr19:57865093-57865219

Coord C2 exon

chr19:57867398-57871266

Length

127 bp

Sequences

Splice sites

3' ss Seq

AGCTGTACTTATCATGGCAGAGT

3' ss Score

4.61

5' ss Seq

TAGGTAAGT

5' ss Score

9.66

Exon sequences

Seq C1 exon

TTCCTATGCCCGGTCCGTGCATTCTGGTTGTGAAGGCTGAGTTCTAGAGATCGGGTCGGCTTTCTACGCGGCTCTCGTGGAACCTAGCAAAGAAAGACAGTGAAGACTGCAGGACCTTCCTTCGCGCTTTTGTTACAATCCATGACCCCTGTCGTGGGACGGGCGGCCTCTCGCGGAGGTGTCTGCCGGGGCTGGGCTCTTACCGAGGCCTCCACACACGTCCTCTTGTCCTTGTCTCCCCCAGAAGCAGCCGCCTTAGTCTTGTGAGCGTTTTTACACCGGGTAGATTGAGACTTGGAGTGCTACACTCAGCCCGAGGGCGTCCAGCGCGGTGGAGGCGTGGGGTTTCGGCTGAGCCCACAGGGCACAGACTGTTCATCCGCTTCTCATGGCAGCGGCGGTGCTGATGGACCGGGTTCAG

Seq A exon

AGTTGTGTGACCTTCGAGGATGTGTTCGTGTACTTCTCTCGGGAGGAGTGGGAACTCCTTGAGGAGGCACAGAGATTCCTGTACCGTGATGTGATGCTGGAGAACTTTGCACTTGTGGCTACACTAG

Seq C2 exon

GTTTTTGGTGTGAAGCAGAACATGAGGCACCTTCTGAGCAGAGCGTTTCTGTAGAAGGAGTGTCACAGGTCAGGACTGCTGAGTCAGGTCTTTTCCAGAAAGCACACCCATGTGAGATGTGTGACCCACTCTTGAAAGACATTTTGCACCTGGCTGAACACCAGGGATCACACCTTACACAGAAACTGTGCACACGTGGGCTGTGTAGGAGAAGATTCTCGTTCAGTGCAAACTTTTACCAGCACCAGAAGCAACATAATGGAGAGAATTGCTTCAGAGGGGATGATGGAGGGGCCTCATTTGTGAAGAGCTGTACAGTCCACATGTTAGGGAGATCCTTTACGTGCAGGGAGGAAGGGATGGACTTACCAGATAGCTCTGGCCTTTTCCAGCACCAGACCACTTACAATAGGGTGAGTCCATGCAGAAGGACTGAATGCATGGAGTCTTTCCCACACAGCTCCAGTCTCAGGCAACACCAAGGAGACTATGATGGACAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000131845_MULTIEX1-2/3=C1-C2

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

Show structural model

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.027

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=4.3),PF0009621=zf-C2H2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=3.5)

Main Inclusion Isoform:

ENSP00000282286