MmuEX0053444 @ mm9

Exon Skipping

Gene

ENSMUSG00000034071 | Zfp551

Description

zinc fingr protein 551 [Source:MGI Symbol;Acc:MGI:3588205]

Coordinates

chr7:13000502-13007195:-

Coord C1 exon

chr7:13007112-13007195

Coord A exon

chr7:13003892-13004015

Coord C2 exon

chr7:13000502-13002567

Length

124 bp

Sequences

Splice sites

3' ss Seq

AATTGTTTCCATTGTGATAGGAT

3' ss Score

6.67

5' ss Seq

TGGGTAAGG

5' ss Score

9.08

Exon sequences

Seq C1 exon

GTTCCCCTGACTTCAGAACCAGTTATGGAGCTTGGCCTGGTAAGTGGATCCTGCCATTACCCTCATGCTACCAACAGGTTTTAG

Seq A exon

GATGTGTCCTTTGAGGATGTGGCCATTCACTTCTCCCAGGAAGAGTGGGTGCTCCTTGATAAGGCCCAGAGACTCCTGTACTGCAGTGTGATGCTGGAAAACTTGGCACTTGTGGCATCTCTGG

Seq C2 exon

GTTCCTGTACTGGAATGGGGGATGAAGACGTAACTTGTGAGCCTGCAGAAGAGGTGGTGTGTAACACAAGTCCATCTCCCCAGGAGACTCATCTCCTTGAGATACCTGTCCCAGCTTTGGAAGAGGCTTGGCACCAGAATGAGTTCTTGAGCACACAGCCTGTGCAGACATTAGATTTGAGCAGAACAGGTTCCGGTTTGAAGGAAGACAGTAACCGGCATTGGAAGAGTTACAGTGGTGAAAAGTCCTGTGAAAGGGATTCTCACAGGGCTACAGCTATGTCAAGTTGCAGATCCCATGGGTTGACTGAGCCATTCATCCGTGGGAAGGATGGTGAGGAGGCCCTCTCCTCTATAGCTGGTGTTCAGCAGCAGGGTGCGTGTCATAGTGAACAGCCCTCCACAGGCTGTCTTCAACAGCAAGCCACTTGTATTCGTGAACAGCCTTATAGCAGTGCCAAGTGTGGGCAAGCACTTTTGAATGGAGAGAAACATTGTAAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000034071-'2-4,'2-3,4-4=AN

Average complexity

A_C2

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

Show structural model

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.171

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=97.6)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF0009621=zf-C2H2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF0009621=zf-C2H2=WD(100=3.8)

Main Inclusion Isoform:

ENSMUSP00000079222