HsaEX0073586 @ hg38

Exon Skipping

Gene

ENSG00000186812 | ZNF397

Description

zinc finger protein 397 [Source:HGNC Symbol;Acc:HGNC:18818]

Coordinates

chr18:35245262-35258049:+

Coord C1 exon

chr18:35245262-35245351

Coord A exon

chr18:35254232-35254402

Coord C2 exon

chr18:35257928-35258049

Length

171 bp

Sequences

Splice sites

3' ss Seq

ATTTCCCTTTTGCTTCTTAGAGT

3' ss Score

9.4

5' ss Seq

AGTGTAAGT

5' ss Score

8.46

Exon sequences

Seq C1 exon

ATTGTGAGAACAGTGAAACAGCAACAAAAGAGGGCATCTCAGAAGAAAAATCACAGGGACTCCCTCAGGAACCTTCATTTCGAGGAATTA

Seq A exon

AGTTGTCCAGACCTCCCAAAGCTTCTTCAGCTATCCGTTGGGAATGTGTTTCTCCAGGAAGTTTTCCCGGCGATATCATAGCTGCTGAGGCTACACATTCAACAATTTCTTGCTTTGCCATCAACACTTTGCCAGCCACCATCCTGCCATCTAAAAATGTGAATAGAAAGT

Seq C2 exon

ATTTTTCCTGAAGAACACATCGTCAATAAATCACCTGCACCCAAATCTCCATCTCAGGCGCTACTTCTGGCAAGGCATATCATGAGGCTAGTGAAGCACCTACAAGAAACTTATAACTCAAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000186812-'16-13,'16-10,22-13=AN

Average complexity

A_C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.348 A=0.026 C2=0.000

Domain overlap (PFAM):

C1:

PF134651=zf-H2C2_2=WD(100=7.1),PF134651=zf-H2C2_2=WD(100=7.4),PF134651=zf-H2C2_2=WD(100=7.4),PF134651=zf-H2C2_2=WD(100=7.4),PF134651=zf-H2C2_2=WD(100=7.4),PF134651=zf-H2C2_2=WD(100=7.1),PF134651=zf-H2C2_2=WD(100=7.4),PF0009621=zf-C2H2=WD(100=6.6)

A:

NO

C2:

NO

Main Inclusion Isoform:

ENSP00000261333