HsaEX0074267 @ hg38
Exon Skipping
Gene
ENSG00000182903 | ZNF721
Description
zinc finger protein 721 [Source:HGNC Symbol;Acc:HGNC:29425]
Coordinates
chr4:437446-472701:-
Coord C1 exon
chr4:472575-472701
Coord A exon
chr4:444343-444432
Coord C2 exon
chr4:437446-437511
Length
90 bp
Sequences
Splice sites
3' ss Seq
GTTATTTTTGTTTCTTTCAGCTA
3' ss Score
9.48
5' ss Seq
AATGTGGGC
5' ss Score
0.74
Exon sequences
Seq C1 exon
GAACCCTTAACATTCAGGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGCCTGGACCCTGCCCAGCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGAAACCTGGTCTCCCTAG
Seq A exon
CTATGTGTTCTCATTTCACCCAAGACTTTTTGCCAGTGCAGGGGATAGAAGATTCATTCCACAAACTTATACTGAGAAGATATGAGAAAT
Seq C2 exon
AGGAAGGAACAGAGCCACAGAGAAAAATGACTTGCTCACAACAGAAGAGCCAGTAGTAAAACACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000182903_MULTIEX1-9/14=6-13
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref, Alt. Stop)
No structure available
Features
Disorder rate (Iupred):
C1=0.008 A=0.033 C2=0.585
Domain overlap (PFAM):
C1:
PF0135222=KRAB=WD(100=95.3)
A:
PF0135222=KRAB=PD(0.1=0.0)
C2:
PF0135222=KRAB=PD(0.1=0.0)
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
AACATTCAGGGATGTGGCCAT
R:
ACTGGCTCTTCTGTTGTGAGC
Band lengths:
173-263
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- The Cancer Genome Atlas (TCGA)
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
- Pre-implantation embryo development