HsaEX1001943 @ hg38
Exon Skipping
Gene
ENSG00000236283 | AC013463.2
Description
NA
Coordinates
chr2:165091120-165130204:+
Coord C1 exon
chr2:165091120-165091299
Coord A exon
chr2:165091830-165093989
Coord C2 exon
chr2:165130045-165130204
Length
2160 bp
Sequences
Splice sites
3' ss Seq
ATCTCAACTCTTCTTTGAAGACC
3' ss Score
5.06
5' ss Seq
CAGGTTTGG
5' ss Score
5.63
Exon sequences
Seq C1 exon
GCAAAGTTGGACATCCCAAAGATGGCATAGATAAACATGACCAGGAAGAGCAGGAGGCCGATGTTAAACAACGCAGGAAGGGACATCATCAAAGCAAAGAGCAGCGTGCGGATCCCCTTTGCTCCTTTGATCAGACGTAGGATTCGGCCAATCCTGGCAAGACGGATCACTCGGAACAAG
Seq A exon
ACCCACCTAGGATGCATCACCTTTATCTCTGGAAGCCTGTGTTAACTCATTCCAGCAGAGATGGCTACTTCCTCTTCAGTGCTTCTTACAATACCAACTTTATTGCATTACAATGATTTGTTTTTTAAGCCATCTGCCTCTTTTAGCCTGTGACCTTGGTTTAAGATTAGGAGAGTACCTGATAATGTTTATTTCCTGTCTTCTTCACCTCTTTCCCAAATCTGGTATTCCTAACATGGTTTCTAACTAGTTAGCTTTGTGAATAAACCCAGGTTTCAGAGTTTTTATTCAAATATGCTAGTGTTGAACTTTACATCTATATGCATTATTATTCTCAGACCTAATTTCCATGTTAATCAGCTAGAAGGTCCTGGGGCAACTGTTTCTCTGTAACTATACCTCTTGGTAATTAAGCTGTTCTTACCTACAATGGAGAGAATCACCACCACAAAGTCAAAGATGTTCCAGCCTATAGTGAAGTAGTAGTGTCTGAGGGAGACGAGCTTCAGCACAAATTCTCCAGTGAACAGAACAATGAACACTAGGTTGATCCGGGACAAAACTAGGGTCATGTATTTGCCCTGGTCATCCGTTTCCACCATCATGGTGACCATGTTGAGGCAGATGAGGATCATGATGCTGATATCAAAGACTTGTCTGGTTACAAAATCAAAGACCATTCCTTGGAATTTGTTCTAGAAAGTGAGAGAAGAGAAATAAGGTTACTATATATATTTCATAAAGAATAATGCAGTAAAATTGTAGATAAAGCCCTTCCACATACGGGATGGATGTGCACCCTCCTCATATTACCCCAAACAATTTTGTGTGCTTTTTTTCTCTTCATGTTAAAAAAAATGGAAAAAAAATTTATATAGCTAAACAAAGCATATTTGGTTTATATAGGTCCTATGGAAAGACAAAGCTGGATGAGACATAAATTAAGGCTGGGCGTGGCAACTCATGCCTGTAATTCCAGCACTTTAGGAGGCTGAGACTGGAGGCTCTCTTGAGGCCAAGAGTTCCAGACCAGCCTGGGCAACATAGTGAGACCTCATTTCTATTAAAAAAAAATTAGCCTGGTATGGTGGCACAGGCTTGCAGTCCCAGCTACGAGGGAGGCTGAGGTGAATCACTTGACCCCAGGTGTTTGAACTTGCAGTGAGCTATGGTCTTGCCACTGTACTCCAGCCTGAGAGACAGAGTGAGACCCTGTCTCTTAAAAAACAAAACAAAAACAAACACATAAATTTGTGACAATTGGCTGATAATATATGTAGTCTTTGCTTGATTTGAATAAGTATGATAATTTTTATAAAAAATAGTGACTACTAATAACAAAGATTTACAAAGCAGGTTAATATCAACAGATATTTAGATAGAGAATACACCAATTCATTTATCAATATTTTAGAAATTTTGGTTTATACCTTATTTCCCTCCCCTGAAATACATCAGTCATATTTCTATTGAATTCTACCTCTCTAGCTCTGTGAATCTATGTATGGGCTTGTTAATTTATCTGTATTTCTTTCCATCTGTCCTTCTTTACCTATGCCCTGTGCTTTAACAAAAATGCATGACTTTAAACACTTTTTTTCTTTGTCTTATTAACAATCATCTCAGGAACAACATGCTTTCAAAGATTCTTATATTAATATGGCTAGTAAATACAGTTTTATTAAAGAAATATATTATTAATCATTTAGAGTAAAAACTTAAAACTTCATGGCTTACCAAAAATCAAAGGTCATGAAGTGACCATGTTTTAATTTTTAAAGAACTCTAGTAAAGTCAGTTCAATCCTTTCCCCTCTTACCCTGCTCCCTCACATTCCAGCTCCAACTACTCTTATAAATATGGTAAAGTCAAGTCACTTAGAGAATTTATGGGGCCTTGTCAAGTCCCAGTTCTGGCAATTACAAGATTTGTGACTTGGGGCATGATTCGTATGTTCTTTGGGCCTCAGTTTCCTTACTCCTTACCAATCTCAGAAAATAGCTGAGTTAGAGTCCAGCTCTGTGAACATAATCTGTCATTATTACATCATTCCATCATCATGAGGCTCTACAGAGTATGCATTCTGAATATGCCTTATTCTGTTTTGGTGTATTTGGTGAAACAAACAATTTTGATGACACCTTTTCCCTTTCTAAACAG
Seq C2 exon
CACGCGGAACACAATCAGGAAGGAGTGGAAGAAGTCGTTCATGTGCCACCGTGGGAGCGTACAGTCATCATTGATCTTGCAGACACATTCTTTGTAGCTCTTACCAAAGAGCTGCATGCCGACCACAGCAAAAATGAAGACGATGATGGCCAACACCAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000236283_MULTIEX3-1/5=C1-3
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
NonCoding
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NA
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains