HsaEX1003785 @ hg38
Exon Skipping
Gene
ENSG00000107890 | ANKRD26
Description
ankyrin repeat domain 26 [Source:HGNC Symbol;Acc:HGNC:29186]
Coordinates
chr10:27079089-27082833:-
Coord C1 exon
chr10:27082803-27082833
Coord A exon
chr10:27080649-27080771
Coord C2 exon
chr10:27079089-27079161
Length
123 bp
Sequences
Splice sites
3' ss Seq
CCATTTAGCTTGTTTTCCAGGAG
3' ss Score
6.03
5' ss Seq
TCTGTAAGT
5' ss Score
7.96
Exon sequences
Seq C1 exon
TGGATGAAAGCTCTGAAGACTCCTTAAGCAG
Seq A exon
GAGCAGAGATATAGAGAGCTTCTACTCTTGGGCATTTGAGACCATCCTTTCAGGAATTTGTGCCTTCATAGGCTGAAGACTTAAAGGTTGGAGATGCTATGGAGCCCTGCAGAAGAGGGATCT
Seq C2 exon
GCTTTCTGGCAAACCGGGTGTTGATGATTCATGGCCTACCTCAGATGACGAAGACCTCAATTTTGATACTAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000107890_MULTIEX1-2/2=1-C2
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.869 A=0.000 C2=0.980
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
PF139001=GVQW=PD(7.7=12.0)
Main Inclusion Isoform:
ENST00000376087fB9371
Other Inclusion Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TGGATGAAAGCTCTGAAGACTCC
R:
ATCAAAATTGAGGTCTTCGTCATCTG
Band lengths:
98-221
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains