HsaEX1011893 @ hg38
Exon Skipping
Gene
ENSG00000185842 | DNAH14
Description
dynein axonemal heavy chain 14 [Source:HGNC Symbol;Acc:HGNC:2945]
Coordinates
chr1:224967431-224969493:+
Coord C1 exon
chr1:224967431-224967583
Coord A exon
chr1:224967680-224968122
Coord C2 exon
chr1:224968759-224969493
Length
443 bp
Sequences
Splice sites
3' ss Seq
CATTTATCTTTGTGTTTCAGAGA
3' ss Score
9.75
5' ss Seq
GAGGTAGAT
5' ss Score
6.04
Exon sequences
Seq C1 exon
AAACCTTTGGAAGATGATGGAGAATTTGTTTATTGCCTTCCTCGGAAAAGTCCTAAATCCCTTTACAATCCATATGATCTTCAGGTAGTATCGGCTCATACTGCTAAACATTGCAAAGAATTTTGGGTTATTACTGCTTCATTTATCTCAAAG
Seq A exon
AGATACTTGGTCATTTGTGGAGCAGTTTATATATAAGAATCTCCTTGGGAGCATGTTATTTAATAGTGAAGTTTTTCCTTTTGTGTAGAGATTTAGGTTTGAAGATTCAACTTTAATAAATTTTTTCATCTATCAAATACTTTGTTAATACTTGGGGTAAATTTTTACAGGAAGAACTACAAAACAAGCATTTGCTAGCTTAATGGGAACTATAATAATAAAGAAAAGAATATTCTTTATTGGCACATTTGTCAGAAACTTTATTGCCAGATGTAGAAATCCCCCTTTTACACTCTTATATAGCATTTTGATATTTATCACAAGTTGAAAATATACAATTACTTGTTTTAATGATTTGTTTAATGTCTGTCTGCCTTTTTCTGCCTTCCCAGCCTCCCATAAAATGAACTTTATTAGTGGGCAAGACCACATCTTTGCATGAG
Seq C2 exon
GTTATTAATATAGTTGGTAGTGTAAAGGAAGTAGAACTCATACCTACTTTGGAATGGCTATCAGAAAGAAGACATTACTATTTATTACGGCAATTCAAGATATTTTCTGATTTCCGGTGAGGTGAAAAAAATGAAACCAATTCTTTGTAGTTTGATCCTATTGAAGGAGCAGTTGCCTGAGTGACATCTGGGTTCTACTACAGTAATACCAGTAGAAAATAGTACTAATTCTTTTATCTAAAAATTTTTTACGGAACACCCCATTTCCTCTGTAACTTATGAAGAAATGCCAATAATTTTGGCATTTAAGAAGCATTTTTCCTTTCAGAATTAATAAAGCATTTGTTACCTGTAACTTATGAGGAAATGCCATAAGTTACAGAAGAATGAGATGTTCCATAAAATTTCTTTAGATAAAGGAAGTTTACTCTTTTCAGTATTAAAACTCTTAATTTTAGTCTCTTTGGATAAATATTGTAAAAATATTTTATGGTCAAGCA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000185842_MULTIEX2-1/72=C1-2
Average complexity
C1*
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
AGGTAGTATCGGCTCATACTGCT
R:
CAGAGGAAATGGGGTGTTCCG
Band lengths:
343-786
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains