HsaEX1011895 @ hg38
Exon Skipping
Gene
ENSG00000185842 | DNAH14
Description
dynein axonemal heavy chain 14 [Source:HGNC Symbol;Acc:HGNC:2945]
Coordinates
chr1:225206968-225231151:+
Coord C1 exon
chr1:225206968-225207220
Coord A exon
chr1:225229954-225230037
Coord C2 exon
chr1:225231073-225231151
Length
84 bp
Sequences
Splice sites
3' ss Seq
TATTTTTTCATCTTTGGTAGTAG
3' ss Score
3.26
5' ss Seq
TTGGTGAGC
5' ss Score
7.43
Exon sequences
Seq C1 exon
GATCCTGTTGATCTGGGATGGGAACCTTATGTTAAGTCATGGCTTCTGAAAACTTCTAAAATTATAAGTCAATCAGGAGTGGATTGTCTTGAATTCATGATTAAAAATAGTGTCACAGACGGACTACAATTTATAAGGAATCGTCAGAAATTTCAGCCATATCCTATGGAGGACATAACAGTCGTCATAACCCTCTGCAGAATTCTTGATGCTTTCTTTGACTTCATGGGTAAAAATGGAGGATTTGAACAAA
Seq A exon
TAGCAGAAGGGGAAGAACACTTAAAGGATCTGCAGAATAAGGGATGCTGAAGTGGGTGATAAAAAATTGATTGAACTTATCTTG
Seq C2 exon
GTGATGATTTGAATGACACGTCATCTAAGGAGGCAAATTCCCAAAGAGAGTCTGTCACATTCAAGGATATAGAAAAGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000185842-'86-111,'86-110,87-111
Average complexity
C3
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.659
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Inclusion Isoform:
ENST00000430092fB13962
Other Inclusion Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
AGTGTCACAGACGGACTACAA
R:
TGCCTCCTTAGATGACGTGTCA
Band lengths:
180-264
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains