HsaEX1012825 @ hg38
Exon Skipping
Gene
ENSG00000181090 | EHMT1
Description
euchromatic histone lysine methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24650]
Coordinates
chr9:137618963-137711030:+
Coord C1 exon
chr9:137618963-137619049
Coord A exon
chr9:137641270-137641353
Coord C2 exon
chr9:137710967-137711030
Length
84 bp
Sequences
Splice sites
3' ss Seq
TTGAAGAGTTTCCTTTCCAGATT
3' ss Score
4.97
5' ss Seq
GAAGTAAGG
5' ss Score
6.38
Exon sequences
Seq C1 exon
GGGCCGCGAGGCGCGGGCGGGGCGATGGCGCGCGGGAGGGGCGGGGCCACGCTGCGGGCCCGGGCCATGGCCGCCGCCGATGCCGAG
Seq A exon
ATTTCCATTTGATTTCCGTGGACTTTGAAGATGGATCATGACTCTCATTCAGATGAAATTCTTTGAGAGAGCTTTATTTTTGAA
Seq C2 exon
GCAGTTCCGGCGAGGGGGGAGCCTCAGCAGGATTGCTGTGTGAAAACCGAGCTGCTGGGAGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000181090_MULTIEX1-2/38=C1-6
Average complexity
C2
Mappability confidence:
98%=100=98%
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.600 A=0.000 C2=0.995
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Inclusion Isoform:
ENST00000460843fB14593
Other Inclusion Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains