HsaEX1044410 @ hg38
Exon Skipping
Gene
ENSG00000177125 | ZBTB34
Description
zinc finger and BTB domain containing 34 [Source:HGNC Symbol;Acc:HGNC:31446]
Coordinates
chr9:126860665-126885878:+
Coord C1 exon
chr9:126860665-126860739
Coord A exon
chr9:126867204-126867254
Coord C2 exon
chr9:126879390-126885878
Length
51 bp
Sequences
Splice sites
3' ss Seq
TCTCTCTTACACTTTTGTAGGTC
3' ss Score
10.02
5' ss Seq
AAGGTAAAT
5' ss Score
8.88
Exon sequences
Seq C1 exon
CGGGGACTGGCCTGGCGCCGGCGGCGGCGGAGGGGGCGCCGCGGGCGGGCGATGTGAGCGCGGCGCTCTGGACAG
Seq A exon
GTCCTATATATTAGTAGGCTTAATTCCTCCCCGTTACTTGTGGACCAAAAG
Seq C2 exon
AGTACGCTTCATGTCAGTAGAAATGGACAGCAGCAGTTTTATTCAGTTTGATGTGCCCGAGTACAGCAGCACCGTTCTGAGCCAGCTAAACGAACTCCGCCTGCAGGGGAAACTATGTGACATCATTGTACACATTCAGGGTCAGCCATTCCGAGCCCACAAAGCAGTCCTTGCTGCCAGCTCCCCATATTTCCGGGACCATTCAGCGTTAAGTACCATGAGTGGCTTGTCAATATCAGTGATTAAAAATCCCAATGTGTTTGAGCAGTTGCTTTCTTTTTGTTACACTGGAAGAATGTCCTTGCAGCTGAAGGATGTTGTCAGTTTTCTGACTGCAGCCAGCTTTCTTCAGATGCAGTGTGTCATTGACAAGTGCACGCAGATCCTAGAGAGCATCCATTCCAAAATCAGCGTTGGAGATGTTGACTCTGTTACCGTCGGTGCTGAAGAGAATCCCGAGAGTCGAAACGGAGTGAAAGACAGCAGCTTCTTTGCCAACC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000177125_MULTIEX1-3/3=C1-C2
Average complexity
C2
Mappability confidence:
100%=100=100%
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF0065126=BTB=WD(100=20.8),PF134651=zf-H2C2_2=WD(100=5.1),PF0009621=zf-C2H2=WD(100=4.8)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm10)
No conservation detected
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains