HsaEX0072136 @ hg38
Exon Skipping
Gene
ENSG00000177125 | ZBTB34
Description
zinc finger and BTB domain containing 34 [Source:HGNC Symbol;Acc:HGNC:31446]
Coordinates
chr9:126860665-126885878:+
Coord C1 exon
chr9:126860665-126860739
Coord A exon
chr9:126863592-126863712
Coord C2 exon
chr9:126879390-126885878
Length
121 bp
Sequences
Splice sites
3' ss Seq
GTCTATTTAATGTTTTGTAGCTG
3' ss Score
7.08
5' ss Seq
AAGGTGAGC
5' ss Score
9.6
Exon sequences
Seq C1 exon
CGGGGACTGGCCTGGCGCCGGCGGCGGCGGAGGGGGCGCCGCGGGCGGGCGATGTGAGCGCGGCGCTCTGGACAG
Seq A exon
CTGACAAACTGCTGAATTTAGCTTAGTGAAGGTCATCAACTGAACGCAGTTAAATTTCTAATGGTTATTTTCTGGTTGATGTTGATGGCAAGGAAAACCTCATGGAAGAATGCAAGTCAAG
Seq C2 exon
AGTACGCTTCATGTCAGTAGAAATGGACAGCAGCAGTTTTATTCAGTTTGATGTGCCCGAGTACAGCAGCACCGTTCTGAGCCAGCTAAACGAACTCCGCCTGCAGGGGAAACTATGTGACATCATTGTACACATTCAGGGTCAGCCATTCCGAGCCCACAAAGCAGTCCTTGCTGCCAGCTCCCCATATTTCCGGGACCATTCAGCGTTAAGTACCATGAGTGGCTTGTCAATATCAGTGATTAAAAATCCCAATGTGTTTGAGCAGTTGCTTTCTTTTTGTTACACTGGAAGAATGTCCTTGCAGCTGAAGGATGTTGTCAGTTTTCTGACTGCAGCCAGCTTTCTTCAGATGCAGTGTGTCATTGACAAGTGCACGCAGATCCTAGAGAGCATCCATTCCAAAATCAGCGTTGGAGATGTTGACTCTGTTACCGTCGGTGCTGAAGAGAATCCCGAGAGTCGAAACGGAGTGAAAGACAGCAGCTTCTTTGCCAACC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000177125_MULTIEX1-1/3=C1-C2
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
5' UTR
Show structural model
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF0065126=BTB=WD(100=20.8),PF134651=zf-H2C2_2=WD(100=5.1),PF0009621=zf-C2H2=WD(100=4.8)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
- Pre-implantation embryo development