HsaEX1044657 @ hg38
Exon Skipping
Gene
ENSG00000181007 | ZFP82
Description
ZFP82 zinc finger protein [Source:HGNC Symbol;Acc:HGNC:28682]
Coordinates
chr19:36383120-36405672:-
Coord C1 exon
chr19:36405580-36405672
Coord A exon
chr19:36390291-36394110
Coord C2 exon
chr19:36383120-36384435
Length
3820 bp
Sequences
Splice sites
3' ss Seq
GCTTTCTTGTTTTATTTTAGATT
3' ss Score
10.97
5' ss Seq
AACGTATCC
5' ss Score
1.61
Exon sequences
Seq C1 exon
GATGCTTCATTTCTAAACCAGATGTGATTTCCTCATTGGAGCAAGGAAAAGAGCCTTGGAAAGTTGTGAGGAAAGGAAGAAGACAATATCCAG
Seq A exon
ATTTGGAGACCAAGTATGAGACCAAGAAGTTATCTTTAGAAAATGACATTTATGAAATAAATTTATCCCAGTGGAAGATAATGGAAAGAATTGAAAACCATGGCCTTAAGGGTCTCATTTTAAAAAATGATTGGGAATCCACAGGAAAAATTGAAGGACAGGAGAGACCTCAAGAAGGATACTTCAGTAGTGTGAAAATGCCATCTGAAAAGGTGTCCTCTTACCAGAAACGCACATCTGTTACTCCACATCAGAGACTTCATTTTGTTGATAAACCCTATGAATGTAAGGAATGTGGGAAGGCGTTCAGAGTGCGCCAACAGCTTACTTTTCATCACAGAATTCATACTGGTGAAAAACCGTATGAATGTAAGGAATGTGGGATGGCCTTCAGACAGACTGCACACCTTACTCGACATCAGAGACTTCATTCTGGTGAAAAACTCTATGAATGTAAGGAATGTGGGGAAGCTTTCATATGTGGTGCAGATCTTAGAGTACATCAGAAAATGCATATTGGTGAGAAGCCCTATGAATGTAAAGAATGTGGGAAGGCTTTTAGGGTACGAGGACAACTTACTCTGCATCAGAGGATTCATACTGGTGAGAAACCCTATGTGTGTAAAGAGTGTGGAAAAGCCTTTAGACAGTACGCACACCTGACTCGGCATCAGAAGCTTAATAGTGCTGACAGGCTCTATGAATGCAAAGAATGTGGGAAGGCCTTTTTGTGTGGCTCTGGTCTTAGAGTACATCACAAACTTCATACTGGTGAGAAACCCTATGAATGTAAGGAATGCGGGAAGGCCTTTAGAGTGCGACAACAACTAACACTCCATCAGAGAATTCATACTGGTGAGAAACCCTATGAATGTAAGGAATGTGGAAAGACCTTTAGCCGTGGTTATCATCTTATTCTCCATCACAGAATTCATACTGGTGAAAAACCTTACGAATGTAAGGAATGCTGGAAAGCCTTTAGTCGCTACTCACAACTTATTTCACATCAGAGTATTCATATTGGTGTTAAGCCCTATGACTGTAAGGAATGCGGGAAGGCCTTCAGACTACTTTCACAACTCACACAGCATCAGAGTATTCATATTGGTGAGAAACCTTATAAATGTAAGGAATGTGGCAAGGCCTTTAGATTGCGCCAAAAACTTACTCTACATCAGAGCATTCATACTGGCGAAAAACCCTTTGAGTGTAAGGAATGTAGGAAGGCCTTTAGACTTAATTCATCCCTTATTCAACATCTGAGAATTCATTCTGGTGAGAAACCCTATGAATGTAAGGAATGTAAGAAGGCCTTTAGGCAACATTCACACCTTACTCATCATCTGAAAATTCATAATGTAAAAATCTAAGAAAGTCTTTTCAACTTCTGTGTTATAGAACATTCTATGAATGTAGTAATTAATCTATTTTGCTCCATACATGCAACTGCGTTGGCATTAGAGGTTTTATACCATTAAAAGAGTGTGACAATGTATTGTAGTCCATCATCACTCAAACCTGAAACTTCAGCATATTTGTTCTAAAAACTAATCCTGTTATAAGAATGAAAAAGACATTTACCGTCATCCCTATCCCATCACTTTGTGTCATACTGGACAAGACGCTTAACTGCTCTGTGCTATAATTTTTTAATTTATGACATGGTCATATAAGAGTGCAGCAGTTTGACACACTTTCAATCAAGAGGTGGAATCTACATCCCTCTGTTGTATACAGGAATCTACATCCCTCTGTGACTGCTTCGCCCAGTAGAATATGGTAGACGTACTGCTGTGCTGGTTTCTTGACTCAGACTTTACTGGTAGGGTTACTTCATCTCATGAAATGACAGAACTGTCTTGTTACAAAGTCTGGCTACTTTGCTGAAGAGACCACATGAAGAGGCCCTGAAACTACGTAGAGAGGGAGAGGCACCTGCTGAACCCTGTCTTCTTGACATCCACCAAGATACCAGACATTTGAGTGAAATTTTGGATCCACCAGACCAGCCACCAGCTAAATGCCAGTGAGCGACTTGGTAACCTGAACTGATGCCATGTAGAATGGAAGAATTGACCAGCTGAGCCCCTGGCCCAAATTTCTGACCCACAAAAACATGAGATATAATAAAATGGTTGTTGTTTTAAGCCACTAAACTTTCTTTTATTATCATACTAAATATTTATTTTTACATAATTCATACTAAAGGCTGTGGGCATAATGAGTATAGAAATGCCTTCCACCAACATTTAATCTTCATTGAACTTGAGATATCTTATTCTCGTTAAAATATTGAAAGTAAGGAATTCCTTTCCAGTTTGTTCATTAAAAAACAGATACCCTAGACCAGGTGAGGTGGCCCATGCCTGTAAATCCAGCACTTTGGGAGGCCAAGTAAGGACGATTGCTTGAGGCCAGAAGTTCGAGACCAGCCTGGGCAACATGGTGAGACCCTGTCTCTACCAAAAAACTTTAAAAATTAGCTGGGCATAATGGTGCATGCCTGTAGTCCTAGCTACTCGAGGCTGAGGTGGGAGGATCATTTGAACCCAAGAGTTGAGGCTTCAGTGAGCTGTGATTGTACCACTGCACTCCAGCTTGAGTGACTGCAAGACCCTGTCTCAAAAAAAAAAAAAAACTACAATCAGTATTCTCTGGCCCCAGTCAATATTAAAAATTGACAAAGGATAACATGAAACTTTGGAAATTAAAAGTCACCTGTATTATGAAGCCCCATTAATTTTTTAAACTACTTCATTGTTTTTTAAAAATGCTAAATTGTCAATTTAGCATTTTGAGGCAATCCCCTCAAATTGGCTCCTGTGTCCTTTTATCATGACCACTCCAACCTTTGAGCTTTTTTTTTTCCTGAACCAAATGCATTGATTAGTTATGGAGCATACTAGAGCATTATTAACAAATAAAGGAAAAGAATGGAATATTTACCTTGCCTATCCTTTACAAACTATATTTCAAGACAACCAAAAGTTGGTGAAGGAAAGTTGTTGATTAGAGAATTCCAACTGGTTAAAAGGTCAAAGGAGGCCAGGCGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCGTGAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTCGCCGGGCGTGGTGGCAGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCTTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGACCGAGACTCTGTCTCAAACAAAAAACAAAAAACAAAACAAAACAAAGATCAAATGAATGATAGAATTTGAAAACTACGCTCTTTAATTTTACAAAATCATGGATTTTCGTGGTGATAGCAATGGATGCGAAGACCATTAGGTGAAAAATGGATAGGAAGCTTATAATGCATGGAGCAGAATGACAGGACACTAATCTATATTAACATCTCTAAATGAGATCAGCCAGATGAACTTGATGTGATGAAATGGATACACACAGTGGACACCTGTGAAGTTTTCTTGGCTCCCCCAAAACTGAGAAGTACAAGTTAGTCTCCAAACCTAATTACCAGTTTACAGGAAACATGGGGAATAAAAGAACAAATTAACAACACAAAGAAGCAAACAACCAAATGCACAATTTGGGAAATTCTGCAGAAGTAATGGCCTAGTTTTTTAACCAATACATGTCAAAAAAAAAAAAAAAAAAGACAAAAATGGAATCCTACACTTTAAAGGAGACTAAGAAAC
Seq C2 exon
ATGCTGCGATAACCAAAAGGACTTCGAAGATGAAAATGTCAGCATTATGGCAGATGTATGATTACTGGTATGGTGAGGAAAGCAACTCCCATCATGCTTTGTAACCAGCTGCTTGCTTTTTTTGAATGATACTTTTCAATAGAATAGAAAGCCCACTAGTCCTATCTTTTATATATACATTATATGTATTTAAACTTTCTTATTGATCAATATTTAGGTGATAAGCATTTTCTCACTGTGAAAAATACCTTATTGAATAGGTCTGTGTTTATTACTGTACATAAGCAAGAGTTTCTCTAAGGTATTTATCAAAAGTAGGATTGCTCAGTCATAGTTAATATTTACTTTCAACCTCACTAGATACTGTCATAGAAGTAGAGAGCATCAGTATGCTCCCAGTGCACAATCCCTTCAACCAGTGAAATATGTTTTCCTTATTTCCTTATATCCTTACTTCTGGTATGCATAGTAATATTTTCCTGGTTAATAGTGAATTGGGC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000181007_MULTIEX1-3/3=1-C2
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref, Alt. Stop)
No structure available
Features
Disorder rate (Iupred):
C1=0.005 A=0.039 C2=0.114
Domain overlap (PFAM):
C1:
PF0135222=KRAB=PD(0.1=0.0)
A:
PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.7),PF127602=Zn_Tnp_IS1595=WD(100=10.7),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.7)
C2:
NO
Main Inclusion Isoform:
ENST00000445543fB30502
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains