HsaEX1045132 @ hg38
Exon Skipping
Gene
ENSG00000181444 | ZNF467
Description
zinc finger protein 467 [Source:HGNC Symbol;Acc:HGNC:23154]
Coordinates
chr7:149764182-149769200:-
Coord C1 exon
chr7:149769090-149769200
Coord A exon
chr7:149766178-149766239
Coord C2 exon
chr7:149764182-149764678
Length
62 bp
Sequences
Splice sites
3' ss Seq
TTCTTGTTTTGACTTTCCAGGAG
3' ss Score
9.34
5' ss Seq
GAGGTCGAA
5' ss Score
-3.91
Exon sequences
Seq C1 exon
GGCACGAGGCCCCTACACCGGAGGAAGGTGCCCACACAGAACAAGCCGAGGCTCCCTGCAGAGGCCAGGCGTGCTCAGCACAGAAGGCTCAGCCTGTGGGTACCTGCCCAG
Seq A exon
GAGAGGAGTGGATGATTCGGAAGGTGAAGGTGGAGGACGAAGATCAGGAGGCAGAAGAGGAG
Seq C2 exon
TTTCGAGAGGCCCGTGCCATGAGACCGCCTGGGGTGAGCAAGGCGACCTGGGCTGCTGCCCGAAGGTTTGGCCGCCGCGGGACACCTGTTTCCTTCCCGCAGTGTCTGCGTCCGCACAGCATACCCAGCTCGGACCTCCTAGGACAGAGACTCAGCGAACCCTTGCTGGGAACCGCTGAGCTGAAGTTCTTGGAAGGCTCCCACCCAGGTGCCCCGTTGGAAAGCAGATATTTCCCGGACCCAGCGCGGCCTCAACCAGGGCAGGAAAGAGTGGTTATTTATGTACTTAAAGTTTCATTAAAGTTAAAATCGGAAAGTTCTGGGGCTGCTAAATGAATTGGGGGAGGGAACACCTGACTCTCCTTAGCCACTGTCCCACCTCCATCCACACACAGACCACCCCCCTCCACTTCCCCTTCTGTCCTGGGTGAGTTACATTTAGCCAGCTGCTGTTAATTGGTTCTCCCAAATAAAAATGTAATATATTTATTCACTAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000181444_MULTIEX1-5/5=4-C2
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref, Alt. Stop)
No structure available
Features
Disorder rate (Iupred):
C1=0.882 A=0.394 C2=0.565
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Inclusion Isoform:
ENST00000484747fB30763
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
CTCAGCACAGAAGGCTCAGC
R:
GACACTGCGGGAAGGAAACAG
Band lengths:
144-206
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains