HsaEX1045166 @ hg38
Exon Skipping
Gene
ENSG00000081386 | ZNF510
Description
zinc finger protein 510 [Source:HGNC Symbol;Acc:HGNC:29161]
Coordinates
chr9:96776000-96778129:-
Coord C1 exon
chr9:96778034-96778129
Coord A exon
chr9:96777582-96777711
Coord C2 exon
chr9:96776000-96776245
Length
130 bp
Sequences
Splice sites
3' ss Seq
ACCATGAACCTGCCACAAAGCGC
3' ss Score
0.88
5' ss Seq
GAGGTAAGC
5' ss Score
9.85
Exon sequences
Seq C1 exon
ACGGATATGCGCGTTTTCGTCTGCGCATGTGCAGTCAACCCCACTTTCCGGCTTCTCCCTGTTAGTGTTTGCTGGTGCAGAGGGTTCGCAGCTCAG
Seq A exon
CGCGTACAGCCCGTGGGTCTGCGGTGAGAGGCCGAGCCTAGGAGCTAGAAGGACCTCGTGAATTTTGGCTCTGTCACTTGAGCGTTTGAAAATGAGGATATTAGTAAAAACTGCTTTGTGTCGTTCAGAG
Seq C2 exon
GAAGGAGGGAGCCCCAGGAACAGGAGTCCCACCGAAGAACTGCTCTCTGACAGAACAGAGACCTCCTCACCAGGGCTTCCAAACAGATGCAGAAGAACCCAGAAAGGAGCAGGTCTTGATTTGCCCAACCAGCGGCACTTCTTCATCCCCTTGCCCAGAGAGCACCAGACTTGGTGATGTCGCCACATCCAGAAGCCATCACAGATTGTGTGACACTGAACACTGTGGGCCAACTTGCAGAAGGTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000081386_CASSETTE2
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.042
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm10)
No conservation detected
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TGTGCAGTCAACCCCACTTTC
R:
ATGTGGCGACATCACCAAGTC
Band lengths:
257-387
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains