HsaEX1045342 @ hg38
Exon Skipping
Gene
ENSG00000075292 | ZNF638
Description
zinc finger protein 638 [Source:HGNC Symbol;Acc:HGNC:17894]
Coordinates
chr2:71380513-71396191:+
Coord C1 exon
chr2:71380513-71380565
Coord A exon
chr2:71395247-71395500
Coord C2 exon
chr2:71396141-71396191
Length
254 bp
Sequences
Splice sites
3' ss Seq
ATGTTATTTACTAATTCTAGGAT
3' ss Score
7.6
5' ss Seq
GAAGTAGGT
5' ss Score
6.22
Exon sequences
Seq C1 exon
AAGAGATGCAGATGCTTCAAAAGCTGTTGAAATTGTTACTTCAACTTCTGCTG
Seq A exon
GATGCAAAGCCGGAATACGAGCAGTAATCGCTACGCCTGACAAACCTGCTGCTGTGCACATCTGTACTCTTCAATCAACAAAACCTGATGCAAAAAACAAAAGGGGGAGATGTAGGAGATCAGTCAGGGTGGTGGGAAAAGTTATAAGGAGAGACGCAAACCTTCTTGGAAGTCCAGGAGGTTTTGCAAAGCTTCGGGAGAGAATAAAGGCTGAAGGCAGCTAAATTCTCTTACCCTGACGCTAAGGGCAAGAA
Seq C2 exon
CCAAAACTGGACAAGCCAAGGCATCTGTAGCCAAAGTAAACAAATCTACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000075292_MULTIEX3-5/5=C1-C2
Average complexity
C2
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.053 A=0.291 C2=0.540
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Inclusion Isoform:
ENST00000264447fB30866
Associated events
Conservation
Mouse
(mm10)
No conservation detected
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains