HsaEX1045440 @ hg38
Exon Skipping
Gene
ENSG00000182903 | ZNF721
Description
zinc finger protein 721 [Source:HGNC Symbol;Acc:HGNC:29425]
Coordinates
chr4:472575-499102:-
Coord C1 exon
chr4:499056-499102
Coord A exon
chr4:497127-497286
Coord C2 exon
chr4:472575-472701
Length
160 bp
Sequences
Splice sites
3' ss Seq
CTGGGACCTTGTTCCTCCAGGGA
3' ss Score
8.38
5' ss Seq
TAGGTAAGA
5' ss Score
9.14
Exon sequences
Seq C1 exon
GGGGCCGTCTTCCCGGCGAGTCCGCGACGGTCGCCGCCCACGGCGAG
Seq A exon
GGATCCCTGATCTTCCAACGTTTTTCGGTGGGGGGTCTGAGGTTTATTTGCTGTTAAAAAACTCCTTTTTTGGGAGTTCCCACTCGCTTCATCAAGGAAGGCAAGCCTGCCTGCTTCTGCATCGACAGATAGCCGTCTTCAGCTTGAGCCCCATCACTAG
Seq C2 exon
GAACCCTTAACATTCAGGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGCCTGGACCCTGCCCAGCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGAAACCTGGTCTCCCTAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000182903_MULTIEX1-1/14=C1-6
Average complexity
C2*
Mappability confidence:
100%=100=100%
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.008
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF0135222=KRAB=WD(100=95.3)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm10)
No conservation detected
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
CGTCTTCCCGGCGAGTCC
R:
AGACCAGGTTTCTGTAGTTCTCCA
Band lengths:
163-323
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains