HsaEX6083054 @ hg38
Exon Skipping
Gene
ENSG00000198169 | ZNF251
Description
zinc finger protein 251 [Source:HGNC Symbol;Acc:HGNC:13045]
Coordinates
chr8:144720907-144754321:-
Coord C1 exon
chr8:144754192-144754321
Coord A exon
chr8:144753683-144753796
Coord C2 exon
chr8:144720907-144721022
Length
114 bp
Sequences
Splice sites
3' ss Seq
AGTGTCCTCATCCTCAACAGGAT
3' ss Score
8.61
5' ss Seq
AAGGTGAGA
5' ss Score
8.68
Exon sequences
Seq C1 exon
GAGATGCCGCTGACCTTCCAGGATGTGGCCGTGTACTTCTCTCAGGCGGAGGGGCGGCAGCTGGGCCCCCAGCAGCGGGCGCTCTACCGGGATGTGATGCTGGAGAACTATGGGAACGTGGCCTCTCTGG
Seq A exon
GATTCCCTGTCCCTAAGCCGGAGTTGATCTCCCAGCTGGAGCAGGGGAAGGAACTTTGGGTCCTGAATCTTCTGGGAGCTGAGGAACCAGATATCTTGAAAAGCTGCCAGAAAG
Seq C2 exon
GGGCCTACCAAGTATCTCCACTTTTGAAAATTGTAATTACTGATAAAAAATTTTTTAAAGGCAGGTTTATTGAAGCATAATTTATAAACAATAAAATTTACTCTTTTTAGTGTATA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000198169_MULTIEX1-3/6=2-C2
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.105 C2=NA
Domain overlap (PFAM):
C1:
PF0135222=KRAB=PU(95.1=88.6)
A:
PF0135222=KRAB=PD(0.1=0.0)
C2:
NA
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GAGATGCCGCTGACCTTCCA
R:
TTATGCTTCAATAAACCTGCCTTT
Band lengths:
210-324
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains