RnoEX0101150 @ rn6

Exon Skipping

Gene

ENSRNOG00000030308 | Zfp251

Description

zinc finger protein 251 [Source:RGD Symbol;Acc:1311138]

Coordinates

chr7:117909961-117939014:-

Coord C1 exon

chr7:117938882-117939014

Coord A exon

chr7:117938438-117938551

Coord C2 exon

chr7:117909961-117912929

Length

114 bp

Sequences

Splice sites

3' ss Seq

AGGGTCCTCACCCTTAACAGGAT

3' ss Score

7.19

5' ss Seq

CAGGTGAGC

5' ss Score

9.6

Exon sequences

Seq C1 exon

GGTGAGATGCCTCTGACCTTCCAGGATGTGGCTGTGTACTTCTCCAGGGCGGAAGGGCAGCAGCTTAGCCCCCAGGAGCGGGCGCTGTACCGGGATGTGATGTTGGAGAACTATGGGAACGTGGCCTCACTGG

Seq A exon

GATTCCCAGGCCCTAAGCCAGAGCTGATCTCCCAGCTGGAGCAAGAGGAGGAGCTGTGGGTCCTGGATCTTCTCGGGGCTGAGGAACCAGAAGTCTTGAGAAGCTGCGGGACAG

Seq C2 exon

ATTCTGAGATCAAGTCTGAGAAGGAGCGATCCATTTTAAACCAGAAATGTTCCGAAGAAGTAAAAACCCCAGAATTATCACAAAAGTTCCCAAGGGCTAATTCACAGGCATCTGAATCCAAGGAAGCTTGTGCCCATGAAAGTCAGGGAGATGGGAGCCAAGGAAGCTCTGCGACTCAGGGTTTGAAGGGTGTTGCTAAAAAGGACTCCACAGTCTGTAGGGAGCACCTGCCAGAGAACACCCAGGCTTCTTCTGCATTTGACAAACACTTGAATCCCAGCCAAAGTGGTGTTACAATTCAAAGAAATAAAACGGGACAGAGAATCTTTAAATGTGACATATGCAATAAAATGTTTAAATATAACTCAGACCTAAGTCGGCATCGCAGGAGTCACACGGGGGAAAAGCCTTACGAATGCGGTCCGTGTGGGCGGGCTTTTACTCACAGCTCAAATCTTATTCTTCACCAGCGAATTCACACTGGGAATAAACCATTTAAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSRNOG00000030308-'2-10,'2-2,3-10

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.089 A=0.385 C2=0.285

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=91.1)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=6.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8)

Main Inclusion Isoform:

ENSRNOP00000028184