HsaEX6094201 @ hg19

Exon Skipping

Gene

ENSG00000196350 | ZNF729

Description

zinc finger protein 729 [Source:HGNC Symbol;Acc:32464]

Coordinates

chr19:22486560-22498916:+

Coord C1 exon

chr19:22486560-22486686

Coord A exon

chr19:22487490-22487585

Coord C2 exon

chr19:22496473-22498916

Length

96 bp

Sequences

Splice sites

3' ss Seq

ATTTATTTTTAATAAAACAGGTA

3' ss Score

5.68

5' ss Seq

CAGGTATGT

5' ss Score

9.8

Exon sequences

Seq C1 exon

GGACCATTGACATTTAGAGATGTGACCATAGAATTCTCTCTGGAGGAGTGGCAATGCCTGGACACGGTTCAGCAGAATTTATATAGGGATGTGATGTTAGAGAACTACAGAAACCTGGTCTTCCTGG

Seq A exon

GTATGGCTGTCTTTAAGCCAGACTTGATAACTTGTCTGAAGCAAGGGAAAGAGCCTTGGAATATGAAGAGACATGAGATGGTAACTAAACCCCCAG

Seq C2 exon

TTATGCGTTCTCATTTTACACAAGACCTTTGGCCAGATCAGAGCACAAAAGATTCTTTCCAAGAAGTAATACTGAGAACATATGCAAGATGTGGACATAAGAATTTACGATTAAGAAAAGATTGTAAAAGTGCCAATGAGGGTAAGATGCACAAAGAAGGTTATAATAAACTTAACCAATGCAGGACAGCTACCCAGAGAAAAATATTTCAGTGTAACAAACATATGAAAGTCTTTCATAAATATTCAAATAGAAATAAGGTTAGACACACTAAAAAGAAAACTTTCAAATGTATAAAATGTAGCAAATCATTTTTCATGCTTTCATGCTTAATTCGACATAAGAGAATTCATATTAGACAGAATATCTACAAATGTGAAGAACGTGGCAAAGCCTTTAAATCGTTCTCAACCCTTACTAAACATAAGATAATTCATACTGAAGACAAACCTTACAAATATAAGAAATGTGGCAATGCCTTTAAATTTTCTTCAACGTTC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000196350-'1-2,'1-1,2-2=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.182 C2=0.012

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF0013017=C1_1=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1),PF0013017=C1_1=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF0013017=C1_1=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1)

Main Inclusion Isoform:

ENSP00000469582