HsaEX6096928 @ hg38

Exon Skipping

Gene

ENSG00000196263 | ZNF471

Description

zinc finger protein 471 [Source:HGNC Symbol;Acc:HGNC:23226]

Coordinates

chr19:56516275-56530221:+

Coord C1 exon

chr19:56516275-56516401

Coord A exon

chr19:56518482-56518577

Coord C2 exon

chr19:56524324-56530221

Length

96 bp

Sequences

Splice sites

3' ss Seq

TGTCTTTTTTTTATATGTAGGTC

3' ss Score

9.98

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

GACTTAGTGACATTCAAGGATGTGGCAATAGATTTTTCCCAGGAAGAATGGCAATGGATGAACCCTGCTCAGAAGCGTTTATACAGGAGTATGATGTTGGAGAACTATCAGAGCCTGGTATCACTTG

Seq A exon

GTCTTTGCATTTCTAAGCCATATGTGATCTCCTTATTGGAGCAAGGGAGAGAGCCTTGGGAGATGACGAGTGAGATGACAAGAAGCCCATTCTCAG

Seq C2 exon

ATTGGGAATCTATATATGTGACACAGGAATTACCTCTGAAGCAGTTCATGTATGATGATGCATGCATGGAGGGAATTACTAGCTATGGACTTGAGTGTTCCACTTTTGAAGAAAATTGGAAATGGGAAGACCTTTTTGAGAAGCAGATGGGAAGTCATGAGATGTTTAGCAAGAAAGAAATAATCACTCATAAAGAAACCATCACTAAGGAAACAGAATTCAAATATACTAAATTTGGGAAATGTATCCATCTGGAAAACATAGAAGAGAGTATTTATAATCACACATCAGATAAAAAAAGCTTCTCCAAAAATTCTATGGTAATAAAACACAAGAAAGTCTATGTAGGAAAGAAGCTTTTTAAATGTAATGAATGTGACAAAACCTTCACCCATAGCTCATCCCTTACTGTTCATTTTAGAATTCATACTGGTGAAAAACCATATGCATGTGAGGAATGTGGAAAAGCCTTCAAGCAAAGGCAACACCTTGCTCAACAT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000196263-'8-9,'8-6,10-9=AN

Average complexity

A_C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.009 C2=0.048

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.6)

Main Inclusion Isoform:

ENSP00000309161