HsaINT0082844 @ hg19
Intron Retention
Gene
ENSG00000160255 | ITGB2
Description
integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) [Source:HGNC Symbol;Acc:6155]
Coordinates
chr21:46330640-46348753:-
Coord C1 exon
chr21:46348569-46348753
Coord A exon
chr21:46330701-46348568
Coord C2 exon
chr21:46330640-46330700
Length
17868 bp
Sequences
Splice sites
5' ss Seq
AGGGTAAGA
5' ss Score
9.21
3' ss Seq
AAGACCCCTTCCCTCCACAGGAC
3' ss Score
10.64
Exon sequences
Seq C1 exon
ATCCAGGGTGAGGAAGGCAGCCCACACTTTTCTTGGAGACACATCCCCAAAGAAGTCCTCACGTGGCTCCGTTTGGGCAGAAACCATGAATTGAACGGGAAAAGAAATATGTCAAGTATCAGAAAGAAGAGTGGCATGCTTTGACAGCAAGTGGACTCCGAGTCCAGGGCAGAGCCTCAGTTAGG
Seq A exon
GTAAGAGGCACCCACCCGACCCAACCCGACCCGACCCGACCCGACCCTCGGGAGCCCTGCTCTCTGGTCAGTTGGCCTTCATGGGGGTGGGGAGGTGGGTGGAGGAATGAGGTTTAGTGGTCTGCGAAGGTGGCAGATCTTGTTTTGGTAGATGAGGGCATTATCTCCCACTGCCCCACCACATTCGAGCTGCTTTCAGTCGGCGTGGTGCTTTTGCTCTCTCTGACCATGCAATTGTCGTTCACTGCTGGGCCATGTGGACGGACTGGAATTACAGTTTCTTCTTCTCCGGTTTTCCCCCTGGAGTCCATCGTTGCTTAACTGTTTTCCTCGTTCCATCTCCTTTGAACATTGAGCATCTTCCCACCCCCAGGGGGCCTGGAAGACTTCCCAGCATAACTCCCCACCCAGCCAAGGCTACCGGTCAGTCTGTCCCTGGACAGGGGGTGACAGGTGAGCCTGTCTGGCAGCCCTTGCCAGGGGCTGTGAAATCTTCCTTTGGGTGAGTCAGGGAAGCAAGAATGCCACCTCCTCAGCTCTCTCCCTCAAGGAGGAGCCACACCACGCAGAGGAAGGCAGAGGAGGGAGGAACTGTGCTCCCAGTGTGGGAAGCTGCGTCGGGGGGTTGGGGGGGCACAGGCCCACCCAGGCCACAGGGGGATGGAGGCTGCCCCCAGCTTCTCGCAGCCCTCCCTCCTTCCTACACTCACCTGCCTTCCCCGGGGCAGATCTCCATTTCTGCATTGCACCCAGCCTGGTGGCCTGGGACCAGCCCTGATGGTCAGCCTGTTTGTATGGATCTGTGGGGGATCCCATGAGAAAGAGCTCGTTGGAGCACCCCACCTGGGGCACCCAACTCCATTTCCTGCCCCGAGCCCTCCCCACTCGCCTCCAGGGAGTGTGTGTCACCTCCTCCCCTCTGCCAGCCCTGCCTGCAGCCCTCTTCTCCGCCCCCGCCCCTGCCCCCAGCCTGCAAAAGGTCTCACCCGCCTTCAAAGGGAGCTGAATCAACACTGCAGAAGGAAGTCACTGGGGGGAAGAAGTGAAAAAGAAAAAAAAAGGCCTACGTGGGGGCAGGGTTGGGAGGAGACCAGAGTTGGGTTGCAGGGGAATTTGCAGGCAGGTTGGAGGGTGGGCGGGAGAGGGAAGTGTGGTGAGTGACTGGGAGGGAGCAGCGGTTCCCGGGTGGCCCCAGGGTCCTCGTGGGGGTGCTCTCCAGGCAGGAAGGGACTTTCTGCCACTTGGACATCTCCCTGTGGGGCCAGACCCCAGGGGTCTCCAGGGCTGGTTAGACTCCTTTCTCATCCCTTATGAACCTCACTGACCTGACTCTTCCCTTGGTGCTGCCAAAATATTGCAGCTCCCCAAGCACCTCTGTGAAGTGAGCCTGGAACCACCCTCTCCCCACTGGCCCTCTCCATCCTTAGCATCTTTCTTGACCTTCAAACCCTGCTCCTATGGGGTCTCCTCCGTGGAAACTTCCAGAATCCCACCTGTCACAGAGAGACCTCCTTCCCAAGCTCTGGGGTTGTGTGTTATGGGGGTGGAAGCTGGGCGAAGGGAAGCTGGGGGGCCCAGGCCAGTGTCCAGGATGGGAGGGCAGGAGAGCAGCCCTCAGGCTCTGAATCTCCTTCCCCATCTATGCTCACCGGCTGCCCCCGCTGCCTCCACGTGTGGACGCTGGGGGTCCCTCTCATCTGCCTTGTGTCATGGCTGACATGCTTGTCTCCTGAACTCGATGGTCTGTTCTGGAGCTCAGGGTCGGGCAGCCTCAGAGCACGCAGGTCTGCCAGGCAAGCACAGGGAAAGGCTCAACCAACCAACCCCTGATGACAGCAGGTAGTTTTCTGGAATACATAAGTGAAAGTGACTGCAAATGGAATTTCTGGGCTGACTGGAGGGAAAAGATTGTTCCCAGAATCCTGCTCCAGTCCTGCTCACTCACGCCTGGCTTCAGAACCTAGCTTGGTGATTCAGCAGATGAGAAACCCTGAGCAGTTGTACCCAGACATGCGGCCAGTTTCGCCCACCTGACTCCCTCGGCTCTTAGGGACGGACTCCTCAGTCCTAGCTTGGGATCAACATCTACTCTTTCCTGTGGCTGCTTGGCTGGAGGGCCCTGGGAAGCAGCCCGGCGTGGCCCCACGGATGCCGGTTGCCGGTGCTGCTACATTTCCTTCTGCGGTCGCCATTTCCTCATCAAAGCAAGAGGGCAGGGCAGCAGGCCTCCCGGCTCCGTGGAGCCTGTGATTTTTCACTCCGTGCAGCCACACCTGATATTTTTACACTAAACGCACCAATTACTCACTTGTCTCCACAAAGAAAAACGTGCACAGCCTCTGACTTCCAGCCTTGTGCAACAGGCACATCAGATGGGGGATAGTAAGATGAGTGCTGAGTGAGTCCCCGGAATGGAGGTCTGGGTCCCCCCATAGCAAGGTCACGGCTCTGGGAAGCCCCACGGTCCCTAGCCCCTCCCCTTCACTCCCTCCACCAGCCTTTATTTAATTAATTAATTAATTTATTTATTTATTGTATATATATTTTTTGAGACGGAGTCTCGCTCTGTTGTCCAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACACCATTTTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCCGCCACCATGCCCAGCTAATTTTATTTTTATTGATTTATTTTTGTTGTTGTTGTATTTTTAGTAGAGACGAGGTTTCACCATGTTAGCCAGGATGGTCTCGAACTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCAAAAGTGCTGGGATTACAGGCGTGAGCCCCCGCGCCCGGCCTCTAACAGCTGTTTTAATGCTCCGTGTGATCATTTCAGCATTGGGATTATCTCGGAGTTGGCATCTATTAGTTATCTTTTCTCTTACAAGTTCTCAAGGTTTTCTTTGTTGCTGTTTGAGTACTTTTGGGTTGTATCATGGACATTTTGAATATTATTTAATAAGACTCTGGATTCTACTAAAATCCTCTGGACAACAATGATCTTTTTGTTTTGCTAGCAGTCAGTCTGGTTAGGGTTAGACCACAAGTCCAGACCTGCCTCTTGTGGGCTGTGGTTCTCATGTGAGTTCAGTTTTTATTTTTTCTTTTCTTTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTCCCTTCCTTCTTCCTTTCTTTCTTTCTGACAGGATCTTACTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGATCTTGGCTCACCATAGCCTTGGCAACGTAGCGAGACCTAGTCTCTATTAAAAAAAGAAAGAAAGAAACAACAGCAACAAAAAGAAAATTTACGGAATTGTGCAATCATCACCACAATCTAATTTCAGAGCATTTCCACCCCCTGAAAGATCCTTCTGCTCATTTGCAGTCACTTCCTCCTAGCTCCTTTAAAAAAAAAAAAAAGATATAAACTATTTTAAGAATACAGAACAGCATGGAGAGCACTAGTACCAATCCCCAAACAGCTACCTCTCATCTTACCAAATCTTAACATGTTGCCTGACTTGCCCAGAACTTTTTCTTCCTTTTTAGTAAAGAAAACTCTACAATAGAACTTTGAAGCCCTCTGCTTCCATCTCCCAGGCCCGTAGCCTTCTCTGTCTTCAGGGGTAACCACTGTCCTGCTCTAGGGGTGTGTGGGTCTGCAGGGACGAGGTGCATGTTATTCTTCAATGCCTCCTTCTACATTTTGCTTTTCAGAAGAATCTCAGTGTTACGGATCTGTGGGTCACGAGGCTTCAGAGCAGCACTTCAAGGGCTCTTATTCATTACCCCGTAGCGTGAGTGTGGCACCATGGATGTATGTGATCTAGGCTATATTTGGGTCCACTTTTCAGGAGTGCTGTTTTTTTTCTTTCATGCCATCCTTTGGACAGCATCTAATTTCATTCAATTGTGTCCGTGAATTTGGCCTCCTTATGGTCTTTGTGCTTTAGAATATGTGGTTATTTCCCTTGTGGTCTAGTAATTATGTGTTTATCATTGTCCCACTTTGTAACATAATTGTGTTTAAGTTGGAGACGAATGGTTACGTTCCTCAAATTCTCTACCTGCCAAATTTGCATTTCTATTTGATTTTTTCTTGTTTGTTTGTTGTTGTTTTTGTTTTTGAGTAAGAGTTTCCTTCTCATCACCCAGGCTGGAATGCAGTGGCACAATCTCGGCTCACTGCAACCTCTGCCTCCTAGGTTTGAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCCTAACCTCAGGTGATCCGCTCACATCAGCCTCCCAAAGTGCTGGGATTGCAGGTGTGAGCCACCGCGACTGGCCTGATGTGTTTATTTCTGAGAGAGATCTGTTAGAGATATTTGCTGTTTGGGGCTGTGTCAGTTTGCTTATATATTTGTCAGTCTTTGTTTTATATATTTTGAAGTTCGGCACACAAAGGATTATGGCTGCTGAACTGTCTGTGGATTCTGACTCTCATTGGCTACATCTTCCTTTGTCCATTTGATGCATTTTGCTTTGATTTCTATCTTTTTGATGTTACACGATATCTTCGTTAGTATTTTCTAGCACATACGTGTATTTTCCGTTTCTTTATTTTCAGCCTTCAGTGTTCTCTTTTAACAGTTTATCTGATAGAGAGCCTTTCTTACACTTTTTACTTTTTAATTGTGATAAAATATACATAACATAAATTCACCATTTTAACCATTTGAAGTTATGCATTTCCGTGGCATTAAGGACACTTAGTACTGTGCAACCATCACCACCAACTTCTCCAAAACCATTTCATCTTGCAAAACGGGAACTTTATACCCGCGAAATAATAACTTTACACTTCCTTGAAATGTTTTTTTAATCTTACTACAAAAAATTTCACACATCTACAGAAGTAGAGAGAATAGATTAGTGAAGCCCCATGTCCCCAACAGTGGCTTCAAAAATAATCAACTCACAGGTGATCTTGTTGTATCAACACCTCTCCCGACTCTCCCCCAACCCAACCCACCCCTCTTTATTGGGAAATAAATCTGAAACATTATACTGCACCATCTGCAAATATTTCAACATGTAACTCTAAAAGATGGGGACTTTTTAACATAACCACAAACCATTGTCACACTTAAAACAATTAACAATGATTTTAAAATATGGTCCATGCATTGCAATTGGTTCTATTAAGAGATTAAATCTCTTAATCTAAAGGGTCTCTCTCCCTTCGTCTCTCCTCTTGTACTGTGCTGTTTGCCTTGTGAGGGTTTCTTCAGCCTGGATTTTGCTAATTGCATCCCTACGATGTCATCTAACACACCCTCCTGATGCTTCTTTGTAGATCTAAAAAGTTCGACCTGATTCAGGCTCAATAGTAACATTTGTTCTTTCTATTTTTCTTGATTTCTATTGTTATTTCATCAAGACTAATTCATTAAAGGTGTGTGCATAACGTCTGCTGCGTCCGTGACGTTCGCAGCGAGGGTCATTGCTTACTTTAAGTCATCAGCGGGTGTAGTAGAATGGTATTCTCTTTCTGTCCTTCTTCATTATTTTCTAGGCTAAGTCTGTAATGAGAAGATACCCTTGACAGAGAACATTTCATTGGAACTTGTTTTGTCTCTTTATTTCTAAAACCCAACGCAAGACCTTGTTGATTTAAAACAAGAAAATGTAACCCATTCACAGGTGCTGTGATTCCTGATGGGTTTGAAATTATTCCCAATGTTTTATTGTTTGGTTTTTATTTACCTTTCTTGTTTGTTCTATTTTCCCTTACTTTTTTCTTTTAAAGGATTTGCCTTTTTTTTTTTTTTTTTTTCTCAGTTACCCAGACTGGAGTGCAGTGGTGTAAGCATGGTTCACCGTAGCCTCAACCTCTTGGGCTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCCTGGACCATATCGCGTGCTACCATGCCTGGCGAATTCTTAGAAAATTTTTTTGTAGAGATGAGGGTCTGGGTCTCCAAATGTTGCCTAGGCTGGTCTCGAACTCCTGGGCTCAAGTGATCCTCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAAGTTTGAGCCACCATGCCCAAAATAAAGATTTGTCATATTTTTTTTCAGGTATATACATGCTATTTTTATTCTTAAGGAGACTCTTGAATTGTTAGCATATATACTTAGATATTTTCTATCAAAATGCCCACTGACAAGCATCTATATTCCTCCCCAGATAGGATGGAACGGCAATGTGCTCCCTGGCCCCTCCCAACCCAGTCCTCTAGGCGTTTTGTTTCACAGCGTTAATATTCTTACCACTATTTTTTAAATCAACAGGTTATGACATCATAATTTTTACTTATTTCTTTGCCCAACTTTGTATCATCTGCTCTTGTATTTCTCATGGATTTCTTCATGTCTATTTCTGCAAGACATCTTTAAAACAGAGTTTAGGAGCCGGGAGCCATGGCTCACGCCAGTAATCCCAGCACTTTGGAAGGCAGAGGTGGATGGATCACTTGAAGCCAGGAGTTCAAGACCAGCCTGGTCAACATAGTGAAACCCTGTCTCTACTAAGAATACAAAAATTACCCAGGCGTGGTGGTACATGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCTGAGATCACGCCACTGCACTCCAGCCTGGGTGACAAAAGCAAAACTCTGTCTCAAAAAAAACTGAAAACATAAAAATAAATAAATAAATAAAACAGAGTTTAGGGTAGTAATGTGTCTGAGTCCTTGCTCTGAAGATGTCTGATTTGGGTTTTTTTTCTAGGTATAATCTCTTTCCCTCCTCTTCCTCCTCCTCCTCCTCTCCCTTCTCTCTCTCTCTGAGCCTGTAGTATTTTCCCTTTCGTGTTCTGTGGTATCCTCCTAATGTCCCTAGTTAACAGGACCTCATCCATCCATCCCTGGGGTGTTCAGTGGCCTCGCAATCCACGTCCCCGCCCAGATCCGCAGCCTTCCTCCTGTGACCTGAGTGTCTCCTCCTCGCTGTCCCTGTTCTGTCCCCTCCCGCCCTCACATGCAGGTGGATGTCAATGCGTGCACGCACCCAGGTTTTCTTGCCTGTTCCCACCTCTTTATCCTCCTTGGCTGGTTCCTCCGCTCCATTCTCTGGCTCAGGAATTTGCTCCCCAGGGTTTTTCATTCCGCTCTGTAGCAGAATGTGCTACTGTTGCTTTCCAGCATCAAACTTTTCACTCCCATGGCCTCTGTGTTCTTCTTCCTAATGGGTGCCCTTTCTGCCTGGCGCTCCTGGAGGCCGGGCCCCTCTCCCAAGTGTGAATCTGATGGAAGCAGGTCCTTCTCGCCGGGACCTCATGTGAGAAATGACATGTCCCACCTGTCTCAAGGGGCCGCTCTCTGACATCAGAGCTGCTGTAGAGCGGAGAGGGGCAGGGGTGAAGGGCCACGGTGGTGCAACCCACCACTTCCTCCAAGGAGGAGCTGAGAGGAACAGGAAGTGTCAGGACTTTACGACCCGCGCCTCCAGCTGAGGTTTCTAGACGTGACCCAGGGCAGACTGGTAGCAAAGCCCCCACGCCCAGCCAGGAGCACCGCCGAGGACTCCAGCACACCGAGGGTGAGTGTGCAGAGGCCCCGCTATGTCCACGGTGATTTTTGGAGGGAAGCACTCTCCTGCCCCAGCCTGGAGTGACCCTGGTGGCCCTGCTTATAGCCCCGGCCCAGGGGTGTCTGGCAGGAAGGGGTCTCCAGACCGTCTGCTCCAGGGTCCCCTTTGAGACCCGGCAAGGGGAAGTGCCTGCCACCAAGAGCAGAGCCACATGGTGTGCTGGGAGCGCTTGCGGCTGAGGATGGGGCCGGCATGGGAGGACAAGGGGCTGTGAGGCCGGCAAGGCCAGGAAGAGGCTGGGCCCACAAGCCCCTAGGGGGACGGCTGGGGGGTCCTGGTGCTCCGGGCTGGGCAGGAGGCAGGTTCCCGGGGCCTCCTCTGTGAACCTGCTGCGCCTGCCTGTGTTAGGCCCTCCTGTCTGCATGCTGCCCCGCCTGGCTACAGCGATTCCATCTCCAGATCGACTCGCAGTGTGTGGTGTGTGATATGGTGTGGTGTGGTTCGTGGTGTGTAGTGTCGTGTGTGTAGTGTGGCATGGTGTGCATGTATGGTGCACGTGTGTGGCATAGCGTAGTGTGGTGTGTGTGTGTGCATGTATGGTGTGCGAGTGTGCGCATGTGATGTGGGGAGTCTGTTGTATGTACATGTATGGTGCACATGTGTAATGTAGTGTGGTGTGGTGTGGCACATGCTCCATGCTCCTCTGGGACCCTCGAGCTTCCCTGCCTCCTCCGTGGGGACCCCTGGGTGACGTCTTGCTGTAGGGGAGCGGGCACCGCTGTGCGATTCTGGTCGAGTTGGTTCAGCTGGTGACCCTGGCCTCCCCACAACAGGCTCCTGGAGGCCATTCCCAAGGTCCTGGTGGGAGGGGGATTGAAGCCACGCCCCTGGGTCCCAGGCCCACCTGGCCCCCTTCCCCCAACACTGCACTCTTGGGGCCAGCCCTCCCCATGCATCCTCCACCCCTGGCACCACCCCTTGCACCACCGTCCCCACACCCAATCCCCCCTCCCCTGGATCTGGGAGCTGGGATTCTGCCCTGCTGTCCCTGTCCATCCGGGGCCCCTCTCCTCTGTCAGTTCCTGGGTGGGGAGAAGGAGGGGTGGCATGGCTGCAATGGGGAAGGGGGGGGATGGCCGGAGAGCTCAGCCTGGGAGCGAGCTGTGGGGGCATAGGGGACACTCGCTGTCACTCGCCTTCCCCGTGACGGTGGCGCAACGCCTGCGGGTTTGGGGGCTGAGGCCGGATTCTGGAGGCTTCACAGAAATGAGCTGCTAGAAGCTCTGGGCTGTCTGCCGTCACCCCAGCGTTTCACCATGAGTGAAGCCCAGCTCACTGCAGAATCCATGCCCAGCTCACTGCAGAATCCCCGGGGGCCAGCACTTTACCAAGAGTGGCCTCCAGACTCCACATTTTAGGAAGGAACTCCTTCCCCATCCAGCTCACAGCAGAATCCCCAGGGTCCCTGCCAGCCTGGCACCCAGCGTGCCCCTCAGTATTCTGGGGATGAGTGGGGGAGTCCCTCTGCTGGGAAGAGGTCCCTGGCTACGTCCCTGCAGGGCGGCGGCTGAGCCCATGCCTCGGCCCCAGGGCCAGTCCCCGCCGGGTGCCATCCTGAGCAGGGCCACAGAACAGATGTCCCACATGGCCAGGACCCCTGTGGCCACCTGACCCCGGGGGGGCTGTGGCCCTCGGTGAAGCAGGTGACCGGGCGGGCTGTGGGGTTTGTCAGCTCCGCAGCGTCACTGCCGCTCAGCGTATGAGTTTCCACTCCCAGCACTCAATGAACAGCTGAGCAACTGCAGGTGCCTCCGAGTGCTGGGAGAGGGGAATGCTCAGCTCCGAGTGCTGGGAGAGGGGACGCTCAGCTCCGAGTGCTGGGAGAGGGGACGCTTAGCCACCCAAGGGCCTTTGCCTCAAGGGAGTAAATAGGGGCATTTCCTGGTGGGCGTGGGCTGGGCTGGAGAAGCAGGGCCTCCTGGCAGGGGCTGGCATGAGATCCAAACACTGCCCAGGCAGCTGGACACTCCTGAGCCTGGAGCTTCTCACCTGAACCACAGGGTGGTAACCCCTGCCCCTCAGGCGGCATCGACGTGACCTGCCTAGTGCACAGTGAGCCTGAGGCAACACGGCCACCACCAGGAGACTCCCTGGGGAAGAGGCCCCCAGACAGCGAGGTGCCCATGAAGGAAGTTCTGCACAGGGGCCGCGGCCATCCAGGAGATGGGAGGGGCCCTATCTGCACCCTGTCTGGAAGGGGCATGGGGTGAGCAGGCTATTTGGTCCCCCGTGACTCAGTTTCCCCATCTGTGAAACAGGAGGGGTGGTCTGGCCAATTGTGCGCACTCCAGCTGTCTCTATAGTCAACCGTGTAACTTGAACTCACTTCCCCAGGGCTCCTGCCAGGCCCAGGTCTGTCCACTCTGGCCCAGGCCGGGCCCCACCAGGTACCAGGGCTGTGGGACATTTGCCTCTGTGGATGGGGCAGCGTGACGCCTGTGGCGATTCCATGGAACAGGTCCTGTGTGGGCCCCCCTTGCTGCACTCGTGTCCTGTGTCAGAGAACCGTGGTCCTGCCTGAGGCCATGTCACCGGAGGCTGGCTCCCGTTCCCGGAGGAGAATGCCAGCTGCCACAGGGGTCAGTGACACAGGCATTTGCCCAGCAGGTACAGGCCAGGTCGCTGGGAAGCCCCAACTCAAGGGGCTCTGCAGTGGGCGCCTAGCAATTATGGAGCTGTGGGTGATACCCACCCCAAGCCGGACCTGGTGCCAGCAATTATCCCTCCCATTCTGCTTGGCACAAACTGGCACTGACACGGGGCATTGATTAGGTGGTTGCATTTGTCGATTCCGAGCCCATGTGTGTGGAGCCCAGGCCCTGAGCAAGCACAGAGGGCCCTGGTGCTGTCCTGAGCTGAGGCCCCTGCCCACCCCGGGCTGCGTGTTCTCTCCGGCCATTCAGGGTCTGAGAGTGCAGAAGAGTTAGCCCCAGGGGAACACCTTCCTGCCCAGCTGATTTGTAAACAGCCTCGCTGGGGACACATGTTGGTGTTGGGAGTGGTGGAGGTTTCTGTGTGTGATGGAAACTTGGGGTAGGTGTTGGGGAAAAGAGGTGCTGAGAGTCTCAGCAGAGGGCAGAGTCCAGGAGTCCTGGAGTGCAGCTCTCAGCCCCTGCGCCGTGCCTAGAGGAGAGGCTGGCAAGCCCCTGTCCCATGGATGGGTGAATGGGTGAGTGACAGTGGCAACAAGCCCATGCCAGCAGGGAGGTCCCACTGCCATGAAGCAGCGTCCTCATCAACGTCACAGTGGGAACAAGAAAGCCAGTAGCTTTGGAATCCGAAGGAGCAATTTCAGCATAATTCGTCGGCCACCATGAAATTCCATTTTTAAAATGTCCTTTATTCATTTATCACAAAAAGGGTGGAAAATACAAACAGGAATAATGAAAATTGAAAATACTCATAGTGCCACCACCCAGAGAAATGCAGAATATTTTGGAACTGTGTCTCTCTTTTTTTCCCCATAAATTCACTTTTACCACGAAGCCAAGCTGCCCTGAGCAGCTGTTTGCATGTTTTCGTTGCTGTGTGGGACTCCATAGCGCAGGCACCGAAACCGCCAAAGCATCTTACACGTTGACGGCTACACAGGGAATCAAGATATTTTGGCTGAAATCCCTGGTTCTTTCCTGGGGTGACTCATATGTTTCTTAGCCAGTTTTCTTCCTTCTTTTGTGAATTACCTGCTCAGGGTGCCACACCCTTGAAACATCCTTGAATGGAGTATTTACCTTTTTGTTATTAATTTCTAAGATCTCTTTAGAGATGAAGATTACCATTTACCTTTTGCACTAGAGAGATAATAGCTATTTCCTCTATGCAATTTGTTAGTACAACATGTGCCATTTTTAGAGTCTGTCTTCTTGCTATTTTCCCCCTTAGCTTTTTTTTTTTTTTTCTTTTGAGACAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAGAGGTGAGATCTCAGCTCACTGCACCCTCTGCCTCCCGGGCTCAAGTGATTCTCCTGCCTCAGCCTCGCGAGTAGCTGGGATTACAGGCGCCCGCCACCAAGCCCAGCTAATTTATGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGCTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCCGGCCTCCCCTTAGCTTTTATGCTGAGGTTTCCTTACTCTTAGATACCTATTCTTCTATTTCCTTTATTGTTTTATTCCCTAAAACTGAAGTCCTACACATTTGTGGCCATTCTTTTATGTCCACAGCAAGAGTGTCCGGGGCCTCGGCCTCACGTCGCCACCCAGGAACAGACAGTCTCCTTCATGTTAGATGGAGGAGTGGTGTCCCCTTGTCTAAAATGCTGTAAATATCATTTGATTTCCCTTTGACTTCAGGTATTTAGCAGAGTACTTTAGCATTCCTTATTAATATGTGTGTGTCGGGGGGGTGGGGTGTCTCATTTTATTTCATTTGGCCAGAAATTGTGGCCTTTAAAATTTGTGCTATCAGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATATGGTGAAACTCCATCTCTACTAAAAATACAAAAATTAGCTGGGCCTAGTGGTGTGCACCTATAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATTTCTTGAACATGGGAGGCGGAGGTTGCAGTGAGCCGAGATCTAGCCATTGCACTCCAGCCTGGATGACAGAGTGAGACTCCATCTCAAAAAAACAAACAAACAAACAAAACTGTGCTATCAAACTTCACAGATAGTCAAACCAACAGTAGGAACACGTCTCCCTGACCCTTGGGAAAATACGCTTTTGCAGGGTCGCAGGTTCAGAGGCGACATGGGCTGGGTTTTCCTGCATCCTCTCTGCTCCGACTTGTTCCTATTTGATCTGACCTGTTTTTGTCCCTGGATTTCCTGGAGCCTCTGTGATCCAAGGACAGTGTTCCAGTCCCCACCTGACGGCACTTCTCTCCAGTTCTTTATCACATTCCTACAAAGCAGAAATGAGTCCATCTTGATGCTCTGGCTTTTGGCTTAAAAGGTGGATGCCTAGTTTATAATCATCCCTTGAGCCTTCAGTTCCCAGCGCAGGGGTTGGCTCCCATGTCCTCTTCCTTCCAACCTTGTCCCCTGGCGGCATCGTCCATCACTTCCCGCGCACCTCCGAGTCACTTTGATGCGAGTGCCTCTCCTCTAGGACAGCGCAAGGTGGGTTTCAGCACAGGCAGGAGGAAGCTCTGATGCAAAGTTCCAATGGGTCTGCGGGGCCTCTGGTTCCTCAAGCAGTCTCGTCTTAGGGTTTTACGGGGTTGCAAAAAGGAAGCCTGAGACTGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGATCAACACGATGAAACCTCGTCTCTACTAAAAACACAAAAAAATTAGCTGGGCGTGGTCGTGGGAGCCTGTAGTCCCAGCTACTCAGGAAGCTGAGGCAGGAGAATGGCATGAACCTGGGAGGCGGAGCTTGCAGTGAGCTGAGATCGCGCCACTGCACTCCAGGCCGGTGACAGCGCAACTCCGTCTCAAAAAAATAAAAAGGAAGCCTGACCCCGCTGGATTCCTCTCCCAGCATAGGCTCTGCCCTCTCTCTGCTGTCTTGCTTAAAGTTTCCTTTCTTTTTCTTTTCTTTTTTTTTTGAGACAGGGCCTCGTTCTGTCAACTAGGCTGGAGTTCAGCAGTGCCATTAGGGTTCACTGCAGTCTCTCCCTCCTGGGCGCGAGTGATCCTCCTGCCTCAGCCTCCTGAGTAACTGGGACTAGAGATGCATGCCACCATGTCTGGCTAATTTATTTTCTATTTTTATTTTTTGTAGAGGTAGGAGTCTCACTGTGTTGCCCAGGCTGCTCTCAAACTCCTGGCCTCAAGTGATTCTCCTGCCTTGGCCTCTCAAAACACTGGGATTGCAGGCGTCAGCCACCAGGCTGGCCTCTTCCTTTCCTGTGTTTGCTCCTGTTCTCCTGTCCTCGACTTCTGTGAAAGGGTGTGTGTGATTTGGCCCGGATCTGCTGCAGGTCTCTTCTGACGCCGCTTTCGTGTCTCAGAGCCTGAATGTTCAGAGCTTTGCTCACCGTGAAGTGTGGTTCTTGTTAGCTGTGTCCATTTGGTGCCCGGGAGGGAAGGGCGCCCGGCCCCTGAGGGGTTCTCCGGGGAAGGATGACCTCGTCCCCCTGGTCCTGCCCCCTCAGCCCCCTGCTTCCCCTGTGCAGGGGACTTGGTGACAGGTACCACTTCCTGCAGCTGGGCTGGGGTTGCACCAGCACTTCCTTCTCGGGCAGGGTTGAGGTCAAGGGCGACTCTGATGCAAGGTTCTGAGAGGCCTGTGGGGCTGTGGATTCCTAAGCAGCCTCAGCTTTGGGTTTTGCACCTTAGGTCTTGGTAAGGGGACCCGCCCGCCCTTAGATGGGGGATGTCCAGAGCTGGAGGATGAGGAGGGCACCCGCCCCTGGTGTGGGGCAGCAGGGAGGGCCTTGGAGAATGAGGAGGGCACCTGCCCCCAGTGTGGGGCAGCAGGGAGGGCCTCAGGGTGATCAGGCTCCAGGCCAGAGCTCTGGGGCCAGCTCAGGGGCTGGGGTGGGGGGTGTCTGTGCTCTTCCTCCCCTCCTGCCCTGCAGCTCTGCCGGCTTAGCCTCAGGGCACCAGAGGTGACAGTGGCCAGGCACCTGTTTGCCCGAATGCTGCCCTACATCTGTGCCTTACCCATTCCCATCCCCCAGGGAGCTGGCACAGGCCCTTCGACCACCTCCAGGCACATGGAGGAAACTGAGGCAGATAGGCCTGATGGGGTCTTGGTCTCTCAGGCCTCAGGTGAGGCCCTGGACCTCCGTGGGCCATCCTGGCTGCTGGGCAGAGGGGCTGCCCTGCCCTGTTCTCCCACAGAAGGGAGGCTGGCTGCCAGGCTCAGTGCACTGCCTTACCTCCTGGAGCGGACCTTCATCCCCAGCTGTTTGTCTGGGCTCAGCCACTGGCATTGGGGGGTGGGGCAGGGCCTGGCTTCTCTTGTGCCCCCAGCTCCAAGCCCCCCAGGGCTGCTCATGGAGGAGCAACAGTGGGGAGAAGGTGGCTCCCCACCAGCCCCCTTCCTGTGGTCAAGGTTGGGGTGCCGTGGTCTCTGAGCCAATCCTGCTGGAATCAAGGTGCACCCCCTCTCCCTGTGGGCAGGTGGGAGTGCCCGGGGTAACTGGGCACCAGGTCCATATCTTGCTGCTGCTGGGGCCCTCAGTTTCCCCATTTGAGGGTATGAAGTGTTTGCATGCCACTGGTCACGACTGTGTTAGGGGCGGAGACCTCATGTCTGCGGCCCCAGGGAGAGCGTGGAGCTGGGGTGTGAGTCCTTACCAGCCTGGCTGGGGCTGCCAGGGGAGGTCTGCACCCCCTCCCCACTTGGCGCAGCTGCGACCTGGGGGAGTCCTGAAGCCGGCTGGACCCTGCACCCTGGGGGAGTCCTGAAGCCGGCTGGACCCTGCACCCTGGGGGAGTCCTGAAGCCGGCTGGACCCTGCACCCTGGGGGAGTCCTGAAGCCGGCTGGACCCTGCACCCTGGGGGAGTCCTGAAGCCGGCTGGACCCTGCACCCTGGGGGAGTCCTGAAGCCGGCTGGACCCTGCACCCTGGGGGAGTCCTGAAGCCGGCTGGACCCTGCACCCTGGGGGAGTCCTGAAGCCGGCTGGACCCTGCACCCTGGGGGAGTCCTGAAGCCGGCTGGACCCTGCACCCTGGGGGAGTCCTGAAGCCGGCTGGACCCTGCACCCTGGGGGAGTCCTGAAGCTGGCTGGACCCTGCACCCTGGGGTAGCTCCAGCACGCACAGGGCCTCCGATCAGCTGAGGGGCTGGTGGGCACTCGTGGCACCGAGGTCAGTCCAGGCGCAGGACTTTGAGGGGGCCCAGATGGAGAGCTGGAACTGGCCTCGGCCTGAACCACAACCCCCAACGATCAGAGATATGGGGGCTTTCAGACACAGGGTGGGCCCAATGTGAACCAAAACCACCTCCTCCAGGAAGTTACAGCAGGGTGCAGGTTCTGTTTTTGACCCCAGGACGGGAAGGATCAAGGGTTCCCTTTTGACATTTTTGTATTCTGATTATAATTTTGCTGGGAACCAGGGAATGAGGTCACTGCCAAAACAACAGGACCTTGGGGCTTGTTGGGGCGTCTAAGCTGTGGGATCCTCAGATGGGCCCCTGGTGGGTGTTCCGTTGGCCTCAGAGCCCCCAGCACAGGTGCAGGGCTTTCGGGGGATGGAGGGGAGCCAGGGCCTGTGGCTGAGGGCACCCGAGCCTCCCGGGCCACAGCACAGCACCCAGCGCTGTCTTCAAAGCCGGCAGGCCCTAGTTTGGGGCTCTGCTGGCTTGGGTCTGCCCACTGAACCTTGGGTGGCCCTGCCAGCACCACCCGAGGGAAGGGTGTGGGGCAGGAACGCCCCAGCAGCCTGGGAGGCCGTGACAGGAACTGGCATTTGCTGGAGGAGGTGTGTTGATCTTTGCTTCTGACAACAGCCCCAGGGTAACGGAAATGTCTTCCTGCCCACCATGACAGGAAGGCTCCTGGGTACCCCTTCTCAGTACCTCTCCACCTTCTTGGTGCCAGATAAAAGGGTCCCAGCCAGCTATAATGTTCTCAGGTCCTGGGAGGTCAGACCCAGGGGCCCACCCCACCTAGGAAGCCCTAAGACCCCCCAAGGAGCCGACCTAGGCCTGGTTTGGGCACCTCCCGGATGGAGGGAAGGGAACCCAGGGGTGGAACGGCCCTGCTGCCCGCTAGGAGGTGCTGCCGGCCTCCAGCACCAGGCTGAGGCCTGCTTCCGTCATTTTGCCTCTGGGGCCGAGGGCCTGTGAGTGACCACTGAGCCGCCCCTGGCTGTGGATGCGTGGGTTAAGGACGGGGTGGGTGTGTATCTGGAAACAAAAGGGCAGGACCCCGGCAACTGGTGGCTTGGGCAAGTCAGGTGACTTTTTTTCCCACCTGGCAGGGACTGCAGGGCTCCTGGGCAGGCCTAGCACACAGCTTGGCACCCGCGGGCATCAAGCCAGCTTTCTCTTCCTGGCACACAGCCTGGCACCCGCGGGCATCCAGCCAGCTTTCTCTTCCTGGCTATGTTTCTGCCACAGAGAGACAGGGCCAAGCCCAGCTCTCCTCCAAGCACAGGCTCTGCTCACGGAGGACCTGGGGCACACTGGGGCAGAGTGCACACACCGGGTGTGTGGGGTTCTGGTGTTTGTGTGCGTGTACATTTGCACGTGTGTATGGTGTGTGCGTGTGGTGTGTGTGTCTGTGTGGTGTGTATGTGTGTGTACGTGTGCATGTGTATATTTGTGTGTGGTGTGTAGTGTCTTGCGGGGAGTATGGTGTGGGTAAGGGGTGTATACATCTCTGTGTGTACATATGTGTGGTGTGATGCATGTATATGTGTGGTGTGTGCATGCACGTGGTGTGTACATGCAGTCAGGCACACATCTGTATGCACGTACACGTGCATGTGTGGTGTGTGTACACGTCTGCATGTGTGTGTGTGCCTGTGTTGTGTGCCTCTGCAGGGGCCCGCTGCAGCTGTCCTGGGTGCCTGGCTGAGCAGGTGTGCTGCCCGCACTGCTGAGCCCGGGATCCCTCCCTCCCTGGCTGTTGGCAGCTGGGCCCAGTGCAGCTGTGCTGGCCTGACCCTAACCCACCCCCTGCAGCAGGGACAGGGCCCCAGCTCCTTGTCCCAGGCCAGCTGGAGGGGAGCTTCATGGGTGGTCAGCCCCAGGGGTTGGGCCTGAGACCGTCACCAAGACCCCTTCCCTCCACAG
Seq C2 exon
GACATGCTGGGCCTGCGCCCCCCACTGCTCGCCCTGGTGGGGCTGCTCTCCCTCGGGTGCG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000160255-ITGB2:NM_001127491:1
Average complexity
IR-C
Mappability confidence:
NA
Protein Impact
No protein impact description available
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.000
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF0143720=PSI=PU(3.2=5.0)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Rat
(rn6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)