HsaINT0084450 @ hg19
Intron Retention
Gene
ENSG00000151704 | KCNJ1
Description
potassium inwardly-rectifying channel, subfamily J, member 1 [Source:HGNC Symbol;Acc:6255]
Coordinates
chr11:128707915-128720785:-
Coord C1 exon
chr11:128720616-128720785
Coord A exon
chr11:128710160-128720615
Coord C2 exon
chr11:128707915-128710159
Length
10456 bp
Sequences
Splice sites
5' ss Seq
GAGGTGAGT
5' ss Score
10.03
3' ss Seq
TTTCTTTGATGTGTTTTCAGATC
3' ss Score
9.97
Exon sequences
Seq C1 exon
GTTTCTTCTCTACTGTGCCTTCATCCCCATCCTGGGCCCTGACAAAGACAGTGTGACAAGTTCTGAGCCCCACAGGTGGAATCCCAAACCAAGCAGCTCTTGCTGGTCACCCCAAGATCTACTTATACATGAAGTTTTGAAAATCATCTCCTGAACCTCTTCTGACAGAG
Seq A exon
GTGAGTGGCTTGATTTTCAATAAGCAACTATTGGACACCCCAGGCTACAAGAAAGCTAGGTAAGCATTTGGTTATGCAGAGCCTCTTAAGCAAAGGCTGTGGGACCTAGTCATTTGCCCTTGCAGGTTCTGCAAGTACTGAGTCCCACCACCAGCATCAGAGAGTGGTGTTAGGCTGGCATTGCTCTCTCCACAGCCCCTTTCAAAAATCAAGCACTTTGAGTCATTTACACCTTCCTATATCTGTTTATTTCCTTGACAGATACCTGTTGAGCCTCTGTTCTCTGCCTGGTGCTGGGGTAGGCAGGGACTGGGGACATGGCAGTGGAGGAGACAGCACAAAAGTAAATGTATCAGTTAAAATTACTGTTCATACCACAAATGAAAGGAAAGCATACAGTCAAATTTTGCAAGGAGAGGAAACTTGATTTAAATGGGGAGGGGGATCTTCTTCCTTCTTTGAGAAACTGACATTTAAATGTCTTTCTGAGAAATGACATTTAACTTGAGGTCAAGAAGTTGGCAAGGGGGTGGGTGTGGCGTGGGGGAGAGTAGAGCTCCAAGGGTTTCCAGCCGAGGAAATAGCAGGTGATGTAGGCCCAGAGAGGTTAAACGACCTGCTCCAGCCTCTATGGTTGGAGGCGGGGGGGCCCTCCGATGTGTCCTTTTTTGCCTTTGTATTCCCAGTCTGCTTCCTGGACATGACCTCAGTACTGACTCCAAGGTCAAGAGCTTTGCCCTCTGCTAGAGCAGTGAGTGTATGGGGCTGGCTCATCGTCACTGGCAGGTTTGCCTTATCCACCAGGTGGTGGGTTGGCGGGCGGGCAGGAGGGGTTGGAGGTGTTGCCTCCTCTTCCCACAGGAGCCATTGTCATCACACCAAACTTCTGCCTATAGAAGAAGTAACAACACCCTGTAGAGGCCTACAGATGTCCCTAAGTGTAAAATGTCACTCCCACAACCTCAGGCCGTTTGCTTATGCCAGGACAATCCACAGAAGCTTCCAAAAAAAAGTATGATGCTGGACAGTGTATCTTCAGCTGCTCTCATGGCTGCTTCTTAATTCTGTTGATATCATAACCATTTCTAAACTCTGCCTGGCTCTGCCAGGCCCCTCTCATGACATCAGGGCCTATGGTCTTCTCCTCCAACACACACCCTCAGATCCAACCCAGGGTACCTGCTGCCCTCTCCATCGAGCTCTCTCCTTCCTCCTCTTGTAGTGCTTTTGTAGATGCTGCAAAACCCCAGAAAACTGTCCCCTCCTGATCCTTTTATGCTCACTATCTAAAAAGGTTTGGACCCTTGCTAGCTCTCACCCTCTCATGTGATCACTCACACAAAGCAAGGAAATGTATAGAAAACCATTCCTGGCGCAGAGTAAGTTGATGCTGAATAAATATTTACTTTCCCTCTACATTGTTTACCAACTGTGTTACATATGCTTTAGGGCTTAAAAGCAAAGACTTGTCAGTTGGGAAGATCTAGATTCTTCTAATCTTTGCTCTTTGGGCTTTCTGCTTTGTGACCTTGGATAAGTTGCTTAACTTCTCTGAGCCTCAGTTCCCAGCCTCCTAGAGTTACCATGAGTTTAAATCCAACAACACCTTTAAGAGATTTTGTATCCGTGCCTCGGATGACACTACAGGCCTTTGGGGGCCCAGAATGCCACTACTCCAGAGGGGCACCGCTGGCATCGTGCTCCAGGGGGCGCTGTTCACTGAGACTGCCGCAGCGTGTGTCTCCAGCAACGGGCAGCAGACTACAGAAGCCCATTCTGGCCGCCTTAATGGCCATTCCACACTCTCTGGAGACTGTTATCAGCCCCAGCCTTTTTCTTCATTCATCTGTGCCTTGCACTTCCATTTTTACCTTGGTTTACCTTCTCAACCCTGGCTCAATCCACTTATATCCAATAAAGCAACACTTTCCCTTAAAGTGCAGTACTCTGAATTTTAGAAGAGAAAAATTCTTAGAAAATCTCTAGTATAGCCAAGTAGCTCCCATTGTGTGGCAGTGAGTTTCTCCTGTCCCCTAGGGTGCTCCAGCTCCTTGTCACTGTTCCTCACAGCCCCTGAGGATGTGCTGCTCTCTCTTTAAAACTCTGAACAGGGCAGGGATCAAGTGCTTCTTTTGGTCTTTCTTCATACAGCTGAGACATGCTAGCATTTCTGAAATATCTTAAGAAACTATTATGAAGAACAACAGGAAACAATATTGGAAATACAGAGGCCAGGCATGGTGGCTCACACCCGTAATCTCAGCACTTTGGGAGGCTGAGGGAGGAGGATTGCTTGAGGCCAGGAGTTCAAGACCAGCCTGGGAAACATAGTAAGACTCCATCTCTGCAAAAACAATAATAACAACAAAATCAGCTGGGCATGGTGGTGCACACCCGTGGTCTCAGGTACTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGAACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGAGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGGGCCCAGCTGGTCTCAGGTACTTTGAGGCTGAGGCAGGAGGATCTCTTGAGCCCAGGAGGTCGAGGATGCAGTGAGCCGTGATTGCACCACTGCACTCCAATCTGGATGACAGAGTGAGACCCTGTCTCAAAAATAAATAAACAAATAAGAAACAAAAGAAAAGAAATGAAAAAGAAAATACATACAGGATAAGCATTCACCTTCCAAAGCATTGATTTCTGACTACAGCAAATGTGGGCTGCCACCAAAGACTGGTAAGACCTCACAAACACCCTGCCCGGGTTCAGGCTTCACTAGCTCCCAGTGGTGGGGACATCACAGCTTCCAGCGCTTCCCACTGGGACCCAATCAAGGTGCCAAGAAGAGGTATAGGTTTTTGTGGTCAGAGTATAGTTATCTTAGGATAACCAATGGCTTTGGGAAACAAGTTAGCTAGATAGAATTCAAAAGCCGAACTTGAAATTTTTAACTCATTTTAATGGCTTTTTCTATTTAACTTGGCTATATCCTTGATTCTTCACTTCTTCATACAGAAACAAACATATGTACCAATTGCACATAGGCATGTAAGACTTGTGGAAGCCACGGAATGGAATTGGTTCTCACCAGTGGGCTTGTAAAGTGGTTTTGTTGTGTTATAGTTACACTTATTTCCTGTGCTCTTAGGGTCTTCAGTGGTCAGTGCCCTCCAGTCAGAAAGCACCAGTAGTACCCTGTATTTGAGCAAGTTGGACTTTTTGCAGCTATGGAGAACTGCACCATAAACAATCATGGGGCGTCTCACTGAGAGGGTTTTGGAAAGGACTTGCATAGGATCTGGGCATGTTTCAGGTGATGCGGCGGGGGAGGCTTAAGGAAGCAATGCTTTGCTCTGGATTAGGGGCTGTTAGGGAGTAGTGATGATTCTATGATCAAATATGTTGATAATTCTTATTATCTAGGTGAGAAGACTGACATGAGACTAAAGCTGTTCTGGGGAAAGAAACAGCAGACACTCATCAGGATGGGGGGATATTCGGCCATTTTGTGGCTTGGACAATGTTTGTGTTTTGTTGGTGTTCAGACATGATTACAGAGTGGCCTTGTTTTATCCCAATCCATCATGATCTGAGTGGCCTGGTCTGAGGCTGATGATTTGTGAGATTGCTTGTGTTTAACAGGAGCAAGACCCAGCCTCATGTGCCAGGAGAACCAAGACCTCGCCGGTAGTACGAGGTCACCTTCCAGTGGCCTGCTTTTCCACAGATCCAATCCTAGTTAATCCTAATCCTAGGGTGAGAGAAGAACAGCATCAAGCCTCGGTACCGTCGCTCTGTTCAGCCTTGCCAAGGATAATTCTCTCCCTCTATCCTGTTCCCACCTCTCCAAGACAAGTCTTTTGCCCTGATTATAGAGAAAACCTTTATAAAACATGTTTGTATTTTCCAGATCTTCTGTTGCGCACTGGGAGGATGGGCTCTGAAGCTAGCATAGTTGATAGACCAGATATGTTGTCAGAACCTTCATCACTCTCACGGAAGCCTTTTCCTCCATTGGCTGTAGTCTCCAATATGGCCCATTTCGCTCCAGGAGGTAGACCCCGATTGGCCTGGACCAGTGACCCCTGATTAAACTGCCATGCTAGTTTGAAATTTGGGAACCAGTTATAATAATTGTAGCTATTTATTGCATAATTACTATTTTCTAGGAACTTTACCTATGCTATTGCATTTAAATCATACAACAATGTTTGAGAGTATATTATAGCCATTTCACAGGTGAGGAAACTCACCTGTATCAGCAAAGGTCAGTGGTTTGCTTAGCTCACCTGACTCTTGGGTGGCAGAGATAGGGTTCAAATCAATGTCTGTGCTAACCCGAGCTAGAAGCCCGTCGACTCTGCCATGCTGCCCCTAGCTGTTACCTCTTCTGGGAACATTACTGGCCAGGATCTCCTATCTTCTCCTGATCCCCTGTGCACAAAAGGACAAGTTATTCAGAAAGTGATACTCTGGATGGCTGGCCCAGAGACGCCTACAGAACACAGTGTGCCTCCTGAGAGTACCAACACCATCAGACCTTGTGATGCTTCAGCCCTTTTTCCCCAAGCTCTCTTCTCTGGAAGGAGGGAGGCACCTAGGAAGGCCCTTGCTGTACACACACCCTGGATACAGACACACTCTGGTTCATAGCAGTGGGGACCCAGGAGTATGCTCACCCTACAAAAAAGTAGGGTATTCCTGAAGTGCATTCCCAAGTCTAGCCTGGAAGAGTCCTGAAGCTCAGATGCCCTCTTCTATGCCCATGAGGCCAGGAAAGATGGTTTCTACCAGCCTTGCCAAGTTCTATCTAAAAAGAGCCCATGCTGTTCCCATGTGAGCTGCCTGATAGTGGTAAAGACATCAGAGATAACTTCTCTGGCATTACCGAACAGAAGGGAAATGCCACTCTCTGTCTACTACAGGTTCTGGATGTGATAAGTGTAGTCTGTGGAGCTAGATGGTTTACTGCTTCTCGGGGCTCTGAACCTTTGCAGATCCAGCAGGGTGGTGATCCTCCAATAGCTTGAGATGATTTTCATAGAAAACAGGAAGTCCTCCACAGCAGCAGTTAGATGCACTTGTTTTCCTTCCTTAGCAAAGCTGAGTAAGAATACAAGCCCAACACCCACCCAACCTTCTGGGTCTCCTCTTTGGGACTGCCTTAACATCGTGTCCTCAATCATTTCAAGGCAGCAAACCTGCCACATTACAATTCTTGAATTACTTATTCGTGAACAACTTGAGAGCAGGGACTGTTACCTTGCATTGTTTCCTAGCATAGCACCTGGTATATAGTAGATGCTCAATAAATAATGTGTTTGTTTAATTATATTGATTAAGAAGGAAGGGGCTCTGCCCCATAATCCCATTCAATCATTGCAATGGAAAATCCTCAAGAAATGTTTCCAGATTCAATCGACTGTTGACAAAGCAGTAATTTTTTCATAGAAACGAATTTCTTCTCCATCACGGTTAGAAAGGGACTAGAGAAAATCATCTGACTTCTCCTCTCAGGCCACATAGCTCATATTTCCTACCTCTAATCTGAAATCCTGACTCTCAGAAATGTCCTAAAGTTACCTAAGGATGTGCATGAGCTATGAGAGGTTTGGCTGAAAGGCAGACTGCAATAAGTGTTTTTTTTTTTTCCATTTCTATAGAGGAACAATAGACTTTTAATTCTAAATCAGAAGCGGTAACAGCCATGCCTATTTTCCCTTTCCCCTCTTTGACATAGTGGCTGTTTGACTGCTGAGCAGGCTGGGGTGGTAAGTGCTGTAAGAAATCCCAAATTCTGAATGAATTGTTCTCAAGTGGATGTCTGTGGAAGAAGAGCTTCTGCACCTGGGTTCATCAGATTCAGTAAGGACCACAAACTGTTGGTCCCTCCCTTAAAATGAGCACATGCTGATTAAAGTAGATGTTGCATAAAAATGAAGCACATATTTTTATGGAGAAAAGGAAATTCAGGAAGAAAATATGTTTGCTTTCAAGAATTTGAAGGGCTGTTAAATGGAGGAGACTTCAGACTTATTTAGAATTTTAATGAGATTTCTCTGAAGCACAACTAGAACAATGTTCTTTATAACAGTTTCTCCTTTCGTTCTATGAAAAAAACCTGTCAAATGGTACACCAAGTGCAGAGTCCGTTGGCCCTAGCTTGCCTTTGCAGCCCAGTGTCTCACTGAGGCTTTCTATGCTCCATTATTTGCTTACTTGGAACTTCTTTCAGCTCCCCCATGTTTTCTTTCCTTGGTTGCCCCTGCCTGGGTCACACAGAAGACTACCCTGTAGTGTGGTTAGTAGTGCACACACAAGACATCTCCATTAGAGTGGGAGCCACCAGATACTATGTGATATAAGTGACAGTAAGCTCATTGATTTTATATTCTCATTGATTAATGTATTTATCATCATTCAGCAAATATTTATAGAGTTTCTACTATATGTGACTCTAACTCATCTTCAGGGCTTGGCCTCAGGGTTACAGTTCTGCTCATCAAAATAGGTGCTCCCCAGAGTGCTCCCACTGTTTCATATCCTGGCATTCATCACTGGTCATTTCATAGATTATTGACACATTTGCACCACCCTCTCTGCTGAAATGGGAGTTGCATGATAACAAGGACTGAGTCCATTACTTCTCTGATGTCTAGCACAATGGTCAGCACACACAGTCAACATTGGGTATCAACATATCATCATTGAATAGTGATTGATAAATAAATTAATGTATACATAAATGCAATGAGTTTTCTGCCAGTTGAAGTATGTTTGCAAAGAAAGGGTGGATCCCCAGCTGATGGGGATCTTTTTAAAAAGTTATTCTTTTTGGCATTATACCAACCATGCTCGGTTGTGGTTGATTTCCTTAGTTCACTTCCCCATTAGACTATGAACTCCTTGAGAACAGGAAGAGTTCTATTTGTCTTTGAAATCCTACAGAACAAGCATACAATCAGTGTTTGGGAAGTGCACAAAATGTCTATTTTCTGAGAATGGATTGTTTATAGAACAAGAATGCTGAGGCACTAAAGAAAAAGTGGCAGTAATGTAATCCGCTTGTTTTGCCAAGCCACTAAAAATACCTTGGTAAATATTAGCTAATGTGCAGCCCTTTGCTTGCTATTAAGATTTACTGATTTCAATAGAAAGGAACCTAAAAACTGAGCATATTATATAACCCAGACACCAGGGACAATCTCTAATCACCTAAGAGTTCATAAAATACATATTGGCTCTGTCTGTGGTTAGATTAAATGCCATTATCTAAAAAAAGTAGGATCTGTGCAATAATAGGTCTGCCATGTGAATGACAGTTTTGGTTAGTGGATGAATTTATCCTGTATCATTGCATTCTCTAAGAATAATCCCTCTCACTCTGAACAAATAAATCAATAGCATTGGCTAACCCAGTGCATGTAAAAAACACCTTCAGTAAATGCCAGGTTTTCCCGAATAATAAAGACTTCCAACAATAAAGACTTCTTTTAAGTCTGTTTCTTACATAACTGTTGTATGGAGAGATTAACATGGTATCTTGTTTCTTCCTGGTGTGATCTTACTTTTGTCTTGTAAATATGTACTTATGTCTGTATGTTCACCTGCATCTTTGTGAACCCTTGGAAAACTCAGTATTTCAGTGGGTTTCAGAGAATAGGCCGGGAGATTGATGATAAGTAAGTGTTTCCGGCCAGTTGTTATTAGGCACAACTTTTAGGAGAAACAAGTGAGCGATAGAGCGTGGCCAAGGAGAGGAAGGCAATGCTGGAACCCAATCCATGCCTGCTGCCCAGAGACCTTAGCTGATGGCTTGTCATGTCTTAGCATGTTGGTATTCAAGCCATGTGATGTTGGAAAGAAAAAATACCTATTCAGCTTGGGGCTTGGTCTGAGAACAACCAATTGCCTTGGTTTAAATCACACGACTCCACTATCAAATTAAGTGTTTCCAAGTTTACACAAATTAGCGTCAGTCCACTGACTGTCGCCTACAATAAATTAGGCTGAGTCTAAAAGAAATCAGTCTGCATAGAAAGACCAACAACCAGCACCACTTCCTTGCTTTTTCCAGCCATGAATGCTTCCAGTCGGAATGTGTTTGACACGTTGGTAAGTGGAGGCTGGGGAAATCACCTCTCTGGAAAGCCAGGCAGATAATGTTTCATCATTAATGCAGTCATGGAAACTCAACGTTATTCAAGTGATCAATCAGGGGGTACTTCTTCACTCTACAGAAATCTTCTTTACCTTTAAAAGTAAAATGAAATTAAGGGAGGCTAGAGGAGCAGGGTGCTGGGAAAAAAACTCAGAAGTTGGTGTGTTAGGAGCCATCTCTGGAATTATAATGTATGACAAAGAGAATGTGGATTCAATTGATAAATGTTGGTTTTAGAATTTACTATTTGAGCTGAGAGTCACTCTCTGGAGAGCTGGGTAAACAGTGTGACCCTGAATGCACCTGGGAGAGAGGTCAGTCCACATGGGTGTAGACCAGGGTAAAGGATGTGTGTACAAGGAAAGGAGAAGACCATTTCCTTCTCTGTACCTCACATGCACCATCCCCTAATCCTCACTGGGGACTTGAGGTCAGTGAGGGCAGTGTGGGATGAGAGGAGGGCCCTCTTGACTATGTGCATTGCTGTTTATTCTCTTGGCAGCATTTTCTTTTTTTATGTCTTTAGAACCTGCCCTCAACATTTCAAATCACCACAGCTGTGGTTTTCTCATCACCGCTTCGACTTGGCGTTGGCTTCTTGTGTTTTCAGCTGGGTTAAGGCCTTGAACAAGACACTGTGGGATATCACTATTATTTAAAATGTATCACTCAGTTGGTTTCGCTTCCTAGTTCTTACGAATAAACACATTTTTCAAGGGGGATTTTGAAATCTATTTTAAAAACATATTTGCATTTAATGAAAAATACCCTGAAGACATTGCGGACCAGGGTGGGCACACCTTGATATTCTTGGGCATGGGGGAGGAGGTAATCTAGCGTTTATGACTTTGGGTTTCACCACTGTCAGGTGTTTATGGGACAGGCCCTTCACCATTTTGCTGTACAATGGAAGTCACAGTAATGTCATCTATAAAAAATCAATTGAGCAAATAGGATTTTGAAAAATGTAATTCATTCACTGAATTATTTCATTTACGTTTACTGAATAAACAGTAGGCACTCATCAACTGTGCTAGCAATTGTGATATAGGAATGAATAAAGTATGGTCTGTCTTTATGGAGTATTACTTAAATCAGTGCTCCCCAGTCCTCCAGCTTTGGAGTAGGGAAGGAAGTGTTAGATGTGTTGATGGTGGCTCTCATACTATTCCTTTTGGGAATCTTGGGAAACCGTGGGGAGAGAGTAGGAACAGGCTTGTAGATTTATGGAGAAGCCCTATGAGACCATCTGGTTGGATCTGAGCTCTGTTCTAAATAGTGTTCAGCATTTAACAAAAAGAAATATGACCAATACTTGTCTGAAAATATTTTAGGGAAGTGTGACTTTAGAATATAACATTTGATAACTGAGACACGGAGTGGTAGAAGCTCCCCTAGACTAGAGGCAGGGAGCCCTATATTCTAGTTGTCATCCTGCCACTGGCTAGGTACATGCATTTGGACAAGTTATTTAAATTTTCTAAATCTCAGTTTTCTCATTTGATAAATGAGAGAACAGAATTGAATTAGGATTTTTCTTGATATATGAGTATCAATAGAAGTACATAGATGATTTAGGTAGTATATTGATGAGTGTTTTATTGGTCAGTTATTCATTTTTCTATATCTCAAAAACATACATAATGCTTCAAGTTTGTGATTTCTCAGAAATTATTGCTTAACATAAGGCTAAACTTATGAGAAGGTGATTTAAGTAATATTCAATAAATAAAAATACAGGTCATAATTGGTTATTACAAACATATTTAAGGTTGTGTGAGACTAATTGAGGTCAGGAAACACTTGAATATATAATCACTTAGTTTGTCTTCATTTCTAGCTCTCTGTAATTATTTTGCCTCTTTATGTTTGAGTAACATGGTCTTCCAGTGGAAAGTTTCTATCAGAAATAGCATTGTGGTATCCAGAATAAACTTGTCAGCTTGCCAAATGATTAGTAACCCAGATAATTTTGAATGATCTTTTCGTAGTTAGGTCTTTCATGTGGGTCACCTAGTTCACTATTGCTATAAACATAATCCTTTTTTGTTTTTCTTTGATGTGTTTTCAG
Seq C2 exon
ATCAGGGTGTTGACAGAAAGTATGTTCAAACATCTTCGGAAATGGGTCGTCACTCGCTTTTTTGGGCATTCTCGGCAAAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCAACATAGAATTTGGCAATGTGGAGGCACAGTCAAGGTTTATATTCTTTGTGGACATCTGGACAACGGTACTTGACCTCAAGTGGAGATACAAAATGACCATTTTCATCACAGCCTTCTTGGGGAGTTGGTTTTTCTTTGGTCTCCTGTGGTATGCAGTAGCGTACATTCACAAAGACCTCCCGGAATTCCATCCTTCTGCCAATCACACTCCCTGTGTGGAGAATATTAATGGCTTGACCTCAGCTTTTCTGTTTTCTCTGGAGACTCAAGTGACCATTGGATATGGATTCAGGTGTGTGACAGAACAGTGTGCCACTGCCATTTTTCTGCTTATCTTTCAGTCTATACTTGGAGTTATAATCAATTCTTTCATGTGTGGGGCCATCTTAGCCAAGATCTCCAGGCCCAAAAAACGTGCCAAGACCATTACGTTCAGCAAGAACGCAGTGATCAGCAAACGGGGAGGGAAGCTTTGCCTCCTAATCCGAGTGGCTAATCTCAGGAAGAGCCTTCTTATTGGCAGTCACATTTATGGAAAGCTTCTGAAGACCACAGTCACTCCTGAAGGAGAGACCATTATTTTGGACCAGATCAATATCAACTTTGTAGTTGACGCTGGGAATGAAAATTTATTCTTCATCTCCCCATTGACAATTTACCATGTCATTGATCACAACAGCCCTTTCTTCCACATGGCAGCGGAGACCCTTCTCCAGCAGGACTTTGAATTAGTGGTGTTTTTAGATGGCACAGTGGAGTCCACCAGTGCTACCTGCCAAGTCCGGACATCCTATGTCCCAGAGGAGGTGCTTTGGGGCTACCGTTTTGCTCCCATAGTATCCAAGACAAAGGAAGGGAAATACCGAGTGGATTTCCATAACTTTAGCAAGACAGTGGAAGTGGAGACCCCTCACTGTGCCATGTGCCTTTATAATGAGAAAGATGTTAGAGCCAGGATGAAGAGAGGCTATGACAACCCCAACTTCATCTTGTCAGAAGTCAATGAAACAGATGACACCAAAATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAAAGTCTCTAAAGCTCCTAGTACCTAGAAGCATTATGAAGCAGTCAACAATTTAGGGGTACGAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTGAAATCTTAAATATGATTATTTGAGCTCATATAAGGTGGATTGGAGCAGATAAAATTATCAAAAGTTTCATGAACAGGCCAAACAAAATATTTTTTAAAGTTTCCTTAAAGAAGTTATGAACTTTAGAAAGGATCAGGGGACAATAATAATCTCATTTTGATTCTACTGATAAGAATGACTCCACTTTTAATGTGGACTTTTACTCATGGAAAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATGCTTTAGTTAAAAGTGGTGATGATATTTCTTTCAATCTGTATTGGATGGCTTAAAGGGCTATAAATCTGTTTATAAAGAGCATTTCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCTATTTCTAAAGAAGAAGTGGGAAAGAGAGAGGAATGGGATGGAGCCCCACAGTCAGAATGTTACTATGTCTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTCGACCTTGAGGGGAAAGTTTTACTGTGAAAGTCTTCTTCAGATCCCCACCTGCATCATTCCGAATGTGTCCTGGAAAAAAACTGGTACTCAAAGCTGCTTAGGAATCAAAATGTTTTCAGTGTGTTGATTAATATAGTAAATTTCTGAAACTGTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000151704-KCNJ1:NM_153766:2
Average complexity
IR-C
Mappability confidence:
NA
Protein Impact
No protein impact description available
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.005
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF0100715=IRK=WD(100=90.6)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Conservation
Rat
(rn6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)