HsaINT0115673 @ hg38
Intron Retention
Gene
ENSG00000116833 | NR5A2
Description
nuclear receptor subfamily 5 group A member 2 [Source:HGNC Symbol;Acc:HGNC:7984]
Coordinates
chr1:200027602-200039795:+
Coord C1 exon
chr1:200027602-200027911
Coord A exon
chr1:200027912-200039657
Coord C2 exon
chr1:200039658-200039795
Length
11746 bp
Sequences
Splice sites
5' ss Seq
TTGGTAAGT
5' ss Score
10.47
3' ss Seq
TCTGTGCTGCCCGTGTCCAGGTG
3' ss Score
10.19
Exon sequences
Seq C1 exon
GAAACTGGATACATGGTTTACAGCAGGTCACTAATGTTGGAAAAAGTACAGAGTCCAGGGAAAGACTTGCTTGTAACTTTATGAATTCTGGATTTTTTTTTTTCCTTTGCTTTTTCTTAACTTTCACTAAGGGTTACTGTAGTCTGATGTGTCCTTCCCAAGGCCACGAAATTTGACAAGCTGCACTTTTCTTTTGCTCAATGATTTCTGCTTTAAGCCAAAGAACTGCCTATAATTTCACTAAGAATGTCTTCTAATTCAGATACTGGGGATTTACAAGAGTCTTTAAAGCACGGACTTACACCTATTG
Seq A exon
GTAAGTAGGAGTTTCTCTATTGATCATCTATTTATTCTGCTACTACATACATATAATTTAATCTTGTTGATGGATTTTGCATTTTAAGTCATGGCTTTTCCTATTATGTTTATTAAAAGCACACAATAAGCCTATGTATATATATCACACATTTATCTTTCTTGCAGTTCAAAAAAAGCAAATGGATATTTCAACATATGAATATTATTCATTATATCTAGTGTTTACTGGTGTCATTCTAATACCCTAATCAGCCAGAAAATATAATTTATACTTTATCAATTTCAACTTTAATATTTTCTGATAATTTTTAATCAGAAATAATAAGCTAAAATTTGAACAATTTGAAACAAGTTAATCATATTGAGTGATCATTGATCAAACTTTAACAGATAGCTGTCAAGTATTTGTTACTTTTCAACCCACACAAAAGTATGGTGTCTTATTCTCTGCTTATACCGTAAAAAATTTTCATTTTATTTTCCTGGGGAATGAAAGTCATGCCCCCACCTCCAAAAAAAAAAAAAAAAAACCAAAAAAACTAGACCATCATTAGTAAAGGATTTGAAGAGCTACTGTTTCTCGCAACAATTAGTATATTTTGTTTTTACAAACAGAAATAAGTAAATAAAGCTACTATTCATTTAAAAAATAGAGTTACAAACTTATGAATTTTATAGCAAGACTACATTCAATTAATTCTAAAAGTAAAGGACTGAAGGGAAGTGATTCCCAGTGATCTGTAATTATTTGTCTGTTGGAAGTCAGGCCCTTCTGCCTTTCCCCAGTTTTTGAAGGACCTGTGCCTTTTCTGGCAGCATTTGCCTAGGCTTTCAGACTGGAATTTCCCTCCGAATTTGCAGGGGCCTGTCATGAGCTCTCTGAGTCTCAGCTCCATTATAACAAGAAAGAAAATCAAGGCTTGAGTTTTTCCTCTTTTTTCCTTCCTAGTCAGCTGACTCCACAGAATGCAGTGGAGTCACAGATTGCTTTTTTTATGGGCCAACTACACCCTAAAGTATATCACTTGAGGAAATGTTTACCAAAAATGTTCTATACTTACGAAAAAGAAAACATGGGGAAGGTAAGCAGGGTGTAACACACAATCAATTGTTCTGCAGATAACACAGAAAATACAGGCACAAGAAAGATGAGAGAGCAGCACACAACCATTTCGCATCTTTTTCGTCGGGCAGAACCGCCGCGGTGCGCAGGCAAGGAGTCCTTCCCGGCAGCTCCGCGCAGCTCCGGTTCCGCGTCCGGGGCCGCAGCTAGAGCGCGCTCGGGCCGGAGACGCGGACTGCGCGCGCACGGGGGACGCGCGCTCGGGGGCTCGCGCCCGCGCGGGCGGTCTTGGGCTCCTGCTGCGCGCAGCCCCAGCTGGCCGCTGCCAAAATAGAGTTGAGCTGGGTCGGGAGACCACGCACGCCGATCCCTCACAGTCTCCCCCACACCCCATGGGTGAATTAAAGAGGGTAAGGTAGGGGAAAGAGACGCTGTTGCACTTTTCTCTGCAACCCTGGAAGAACTGTGTTTCCAGCTACCGCACGCGCAACTCACATCGCAAGGGACCGAGGCGGTACACTCTGAGCGTAAACAGAGAACACCTGCAGCTCTGGAATCGGTCCCACCGCAGAGGGCTGGGAACCGGAGGACTGTCGGTCCAGCCCATAAGGGGCTGCTGGGGACTAAACCTCAAGAAAAGTACCGAAGAAGGCTCTCCCCTGGCCTCAGCGAGACTACCCCAACATCCTAAACCTGTGCAGGCACTTCCGGGCGCCGGATTCCGGGATAACAAAATTCCAGTCAATTTGCCGGTAAAAGAGACCTCTTTCAGGATCTTGTTCGCAGCCACCCGCCCCTTCCCAACCCAAGCACATCCCCTCCGCCTCCTGGTATTGCAGCCCCGCAGGTGGTTGTGAGGTGTCCGCACCTGCAACATCTTAGTGACCCTGAGGCGGCTGTGGCACCGGGAGACAATCTGTTTACCTCGTAGCCTCCACGAGGGTGCTAACGGTCGTTCCCAGGGTGAATGGCTGGACGGAGCCATCCAAAGGGCTGAGGGAGAGGAACAGAGGGCGGTGAGGAGCCTTCGGACTGAACTATTGGATTGAAGGGCCTGACCCGATTCCTGAGGGAGAGATGCCCCTTGAATGGGTCTTTCTGATTGCCCAGGGTAGCCCCACTGGGAAGAACCCACGGGTGCAGCTGTAGAGAGTGTCTGAGGGTCTCGAGGGTAGCTTTCAGATGGCAAATTGCAAGTTGGGCTGTGTTGAGTGGTTCACAAAACCGAGCCCGGTGTATGTAGACATCAGTCAGGGTTTACAATTCTATATTTAATTCAGTTGTGTTGTACTAGGAAATGAGCCTCCTTTTGTTTAAAAAGCTGTCTCCATGGTTTTTAACTAGGGGCTACATCTTGTATGCACACTGATGGTTACATGAAAGTTTTGTATAGATGTCTGTGCTTGTATAGAAAAGCAGAATTAAGATAAAGTTGTTCCTTCTGCCTACCTGCAAGATAATCATTCATTGTAGTGTAAAAGCAGCACACTCAGGTTATAACTAGATTGTTCCCTTAAAGTTAACTAACTCTGGGACACTGGCCAGACTCTTGGTTTCTGGTCTTGGTTTACTTCTTTCTCCCAAGTGGGATGATTCTATTGAATAATATGCAGTACTAACTTTAGAAGCTTTTTATACTTACCTATATCAAGAAAAGAGCCATATCTGTGTGGTAGGAAATGTTATACATAAAACAAATATTTATTGACCACTCCCACAGTGCCCAATATTATGCTTTGATTCATATTAAATTTCCATAATTCTTCAAATTAACTGCATTTGCAGAATATTTTATGCACTCAGTATAATATTGCATATTATCCACAGAAGGTTATGTCTGCATACTTAGGGGTACATGATACACAGTGCAAACACTGTATTGAGTCTGTAATGTGAGTCTTGCTATCTGGTCCCCTGAACACTCTGAGTCTGATTTTATTTCAGTGATAACCTCCAGCAAGCTCTGTGCTCATAAGGATCTCTGAAAGTAGACGTTTCATCAGCGGAAAGTGTGATAGCCATTATGTCACCCTAACCTCCAGCGAGCTTTATTTAGAATGCCAGCCACACAAGCCCATGTTCTGATTCTCATAGTTGGGGCTTAGGCTGCCAGTTTCTTCTATGAAGCTAAACTCTAGAGCCTCCCTTCTTTCCATGCCCGAGTCCATCTCCAAAACAGTGCTTCTCAGATTCCTCTTTTCTGGCCTGGATCCACAGGTAGTGACCAGAGTTAACAGAGTTCTTGGGCCAGGCACAGTGTCTCAAACTGGTAATCCCAATACTTTGGGAGACTGAGGATGGAGGATCACTTGGGCCCAGGAGATCCAGACCAGCCTAGGCAACATAGTGAGACCCAGTCTCTACAAAAAATAAAAAAATAAATAATTAGCTGGGTGTGGGTGTGGTGGCATGTGCCTGTAGTCCTAGTGACTAGGGCTTGGGGGTTGAGGTAGGAAGATCACTTGAGCCAGGGAGGTTGAGGATGCTGTGATTGTGCCATTGAACTCCAGCCTGGGCAACAAAGTGAGACCCTATCTCAAAAAAACAAAACAAAACAAAACAAAACAAAAAAAGGATTTCTTTTTCTTTAACACCTTTTTTTTTTTTTTTTTTTTTTTTGAGGCAGAGTTTCACTCTTGTTGCCCAAGCTGGAGTGCAATGGCATGATCTTGGCTCACTGCAGCCTCAGCCTTCTGGGTTCAAGAGATTCTCCTGCTTCAGCCTCCCAGGCAGCTGGGATTACAGGTGCACGCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAAATGGGGTTTCACCATGTTAGCCAGGCTGGTCCCGAAATCCTGACCTCAGGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAAATGTGAGCCACCACACCTGGCATCTTTAACACCTCTTCTAACAAACCAAGAGAGATTTATAGAGGAAGGGAGAACAGAGGCTTGTTAATGCTTCTCTCCTTTACTTGACCCCTCTACCAGACACAATGTCTAGGATTATCTTGGATTCAGCCTTGAGCATAAGTTGAGCTAGAGAAGGGCACATTGTCAGACTTCCACCTACAGGCCCAACCCAATCCCCACCCCCAGGGATGCACTAGGCAGGCAAGACAACTTCACTCCGCAGCTCTAGAGTCTACCTTAGGATAGAACTAGTTCTTTGAGTTGCACTTCCTCACGCTTCACCTTATTGGAACAGACTTCTTGGAAAAATCCAGTTGGCTTCAAGGAACTTCAGGAGGGCATTGTGCTCTGGGGAGGCCCTGGGGAAGTGTTGAAATGTGACCAATATGATCTTGAGAGATCAAGCTTGAGAAAACCATGTGAACTGGAACTGACCAGGCAAGCTGATAAAGGTTGTCTCTTCTTTAGTCTTTTGGGAAGCTGTTATGTATGTTTTTGTGTGGTTGATAAGTAAGAAAAGATATTTGGAGTGTAACTTTTAAACACCAAATAACCTGAATGCAGATGACCATGAGCACTTATATGAGCAGTTTTATCTGGTGATAATGTAATTGTCCCCAAGGACTTTGTCAAGCCCTGCAAGACAATCAAGTTAGCAAGCACATCCCACTGGAAGGTGATCCTAGAATGGTTAGTGATTCCCTTTTTACTTTCCTTACAGAATGATGAGTTTGAGTGAAGCTAAGGGGAAAGACAAAGGGGAACTGATATATATATATATATCCAGCGTAATATATTTCTTTCCTGGCACTGTCTCATTTAACTATAAAGTTTACTTTGTTAACCCAATTTTACTGATTAAAAAATGGAATCAGAGGTCAAGCAATTTACTCAGCTTGTCAAGAGAATGAACTGTAAATAGAACCCAAGAAATATTCTGAAATACATACTCTTTCTCCAAAGTGGTAACCACTTGTTCTTGTTGATATAAAGGAATTATGATTTAATACAATGTTGGTCTATGCAGACTTTCCTCCAATGGACATTTCGAGCTTAAGAAACATATTTGTAAGTGGCTTTTTAATCTTCATTTCCATTCCACGGTAGAAACCATATTTGGATCCTTCTAGAATTCAGAAGGGTGGCACAGGGAGTGGTGTATGGAAAGCAGAGTGGAAATCACATCTGGGAGGACTGAGGTCTGAGTGGGGTGGGACAAAGGCACTTCTGGTCCCCTACTCTGGAGTTTCCTGGAAAGGATCTCTGGAGTTTGGATGAAGTTTAGCTTGTGAATTTGTGGTGTATGGTAACAACTCGCAGGGTTACCAACAGATGGTGAGAAGGAACTGAGAGGAAATTCAGAGCATGTACTTGTTATAGAGTCAGTGAGTATGAGGAGGGCAGGGAAATCACTCAAACTGAGTGACTGAATTAGATAGCATAAACAAACATACTGTTGTACCATGAGAGGAGGGGATAGGGAAAGACAATTTAGGTGTCAATTAAAAAAAAAAGCACTTTTGACAAACCCAGCTGTGCCTCTTGCAGTGAGATATGCTAGTCCCACACCCATGCTAGCATTTTTCACGGTAAGTGCTGGATTCCTTGCTCAGGGTTTGGATGCCTGCAGCCTCTGCTTCCCGGCCTTCTGCAAGCTCCACCTGCTCCAGCGGCCTCTACAGGAATGGAAAGAAAATTGGTCGGAATCCACTGCTGGGTCCTGGAATCAACTTCCCAGTTTCCAGACAAGAAACTCTGGAGAAAACAAGTGAATCTCTCTCAAGCCTTGGCACACACTGTACACCATCTCGTAATCGCGAAAGTTATCACCATGTTGGAAAAGCCCACGCCCTTCTAATTGTGCAACCTCTGTAACTGCCCAGACCATAACACTTTCCCTAGTTCCACGCCCCATGCTTGAGTGTGACGGTACCACTGTTAAGTCTTGCCTTTCCAAGCTCCCACTTTCTTTGCTGACCAAGTGAGACCCAAATTGCTGGACTCCGCACCTCTGCGGTCCCGGCACTCTTTGACCTTAAGAATCAGAAGCTCAGGCAGGGGCTTTTCTGAAGGAAGAAGTTTGGTTGGATCCATCCCCTCGCTGCAAAAGCCGAGGAATTCTGAAGCAATGCAGGATGTTTCCCCTTCCATCAAGAAGTTTCCAGTATCGCCGGATACATTTAAATGGCAGCCTAGAATAATCTCGTGCTAAGGATTTTGTTCCTGACCCAGGTTGAAGCGGAGGAGAGGGTGTAAAGGATGCAACTGCAAGTGTTCAGCTAGTTTCACAAGGTGCTTTGTGGCCTACTAGCGCCGGGATCGTCGTTCTGTTGGCCCCGAGGCTGGACAGAATTGATTCCAATGGATGGAGTCCCAATAGTTTTGAACTGGAACTGGCTCAAATTTCCATTTCAATTACAGAGAGGAAGAGATAGATTAGACCACCTACCCGAGATTATTTCCCCTGCCCCACTCCTTTCTTAAGACCGGATCTCCCTGTTACATTCTTCTAAGGGCACCGACTATACCCTGGCGGGGCACTCCAGGACCCCTGGGTTGGGACAACGTGCTGTAAAGAAAATAAGTGAAAAGGTTCTTCAGTGAACTCTTTTTATACAAAGAGCCGTAGATTCCGATATCCAGGCCAAACTCTCCAAAAAGCCCTCCTTTCCTCTGGGGCAAGGGTGGGAGGTTGCCCGGGGGGGTGGGTGGGGGGTAGGTTGGATTACCCAGATAATTGCTTCGGCTTTCGTTTTCCTCCGCGATAAAAACCGCGCCACGCCAGATCGAGATACTCTCATAGTGATTGTGAATCAATCGCCATCCTGCTCTAGGGGCTGATGTTGATGTCTTAAGTAGTTATTCACACGTGCAGCAGAAAGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAACAAGGCACGACTGCTCACCTATTCAGGTTTGCTTTTTTAAAGCTTCGATCAACACGACGCTCCCTGGTAATTCCTATGGCTGTACTGAAATTTAACCCGTCTGTTTCTAATACAAAGCGCTCGGGATGAGGGCGGGTGGAGCCTACGGGCGTGGGCGGGTAGCCCAGCCCTCTGAGCCAGGGAATGAAACTGGAGTTCTGGCTAAACTTTTCAGAGAAAGGCAAAAGCAGCTTCTGATGGGTTTTTCGGCTGGGAGGGGCGGAAAAATTAGGCAGACCCGGAGCTCCCGTAGGCTGAAAAACTTGCTCCTCTTCCCCCTCGGGCTATCCTGGCCTAGTAATGGAGATCTGAAAAAAATCTAGACTTCTTTCGGGGTCTAAAAGGTAGATATGTGGGACGAAAAAAGTAATTGTCCTGGTTTCTTAAAAAGCACCAAAAAGTGGGAATGGAAGAGAAGACGGGAGAAATTGTTTCGAAGGAGGAAGGTATTGCAAGTTTTGTGCAAGTTTGGGTGGGTCATCTACCCAGGCGCGCGGGGAAAGATGTGTCTGCCACACCTTTTGCGAGCCCAGGAAACTTGAACCGCTCCTGAAAATCCTGATATTTTTTCCCGCTGCAGCCCGCACGGGTCAAGCGCGCGGGGGCTGACCAACACTTTCCAGGTCAGGTCGAGTTGATTGCTCCCAGCTCACGCTCCGAAATGCGGTGCTGAACCACGGGAAGGAGGGGGTGGGGAGGAAGGCAGGCAGTTGCATCCTCGCGAGTGGGGAGTGCGAGGCCTCCTCAGCTCCAGCCAGCTGGGTGAATGGGGCGCGCACGGCCCCGTAACGCCGAGCGTGGATAAAATATGCTAGGACTGCGCTTCTCCGGCTCATCAAGGCTGCGGGAGCCTCCCCGAGCCATCATCCTTCGTAATTGCAACCGTCAATCAACACTTTAAGACAAAGTCAGAACCGGGAAGGGCGAGCCCTGGAGACCTGTCTCGTCGGAAAGAAGGAGGTGGAGGGGAGGTGGGGGAAAAGGAGAGAAGTTTGCCAGAAGTTGGCAGAGGGAGTGCAAAGAAATTGAGAACGCGCAAGGTAGTTGAGCAGAGCTGTCCCCCGGTCTCACCACAGACTCCCAGGCCTCCCGGGTTCTAGTCTCTGGTCTCCGCCACCAGTTACAATTCCCGCAGCGGTAAGTACGGGGTGGGTTCCTAAGTGTGCTTACACTAAGAGGTACAGTGGCAGTTGCTAAGATGTCCCCGGCGGAGGATGAGATGCGTCTGTCCACCCGCGGTAGGTGTATTTATGGGTCAGTGCAGACCACCGCTGGCGCCGGCGTTTAGACCACACAGACCCGGTTCCACCTACTTACATCTCAACTGCTTTCCCTTCCCGCAGCCACTTGGCTGTCTTCATATTGTGGCCTCGGGAACCCAGAACCATTCTCAAATAACCCATCTTAGACACCGCAAACTCGGGTTCCTCCTCCCACAGCTTCCTTTCGGAGAGGGCTTTCTGGGGGACGCCCAGACCCGTCCAAGGTCACTGAGCTAGCGGGTCCCCGGCTTCAACAGGGGTCCCTTGCCCAGCAGAATTGAAGGGTCAAAGGACCAGAGTGAGTGCTCAGAGGGAGGAGGGAGTTCTGAGGGAGAAGAAAGGGTGCACTTGGAGGGCAGTAATGAGCTTGACGCTGGAAGCCTGGTGCCGCCGCCCCTGCCTCTGCCTCTTGGATGGAGACCCAGCTGCTTCCTTAAATCCCTTGCAGAGCTACCTGAGGAAGGTTTGTGTGCCCTCGGGTCTCTGGCAAGAATCAATTCCAGTGGAAGATTCCTTGCCTTGTCCACTGCTGGCGGGGATCTTGACATCCTTCCAGGGGATCTGAAATAGGGCTGCCCCCAGGGAGCGTTTCCCATCGTCGAGTTAAAGGCCTGGAGCGCCGAGGGCTTAGGCTTCTGAGCTAGGAGTTCCCTTGGTTCTTAGGAAAGGTCGTTTTCTCTCGCTCGAGACTTTCTGCTCTTTCAGTCCCCCTCCATTTCGCTGCTACGCTTAGGTTTTGGCCTGGACTAGACTTTCAAAGCAAAGGAAAGGGCTTCCCTCCGTGATACAAGCTCCTGCGTTAATTTTTTAAAGCATGGATTTTTAAAACCCAGTCCCCAGCCACCGTTCCCTCCCGCACCCCTCCCATTTTGTGAGGATTTTTCTTTCCTGGAAAGTCCACCTGTGGAGAGATAAATGAGTGCCAGCTGGCCTTTTGCCACCACCACTCTCCATCTTTCGGGGATGTGGTGGGAGGGTAGACTGGCATGGACCAAGAAGTCGCTAGTGTGGCCTAAGCAAGTCCCTTCTGGCCCTGGCAGCTGGCGTTATGAGCATGGTCACAAAGCTTGTCTCACTAGGTCAGCCTCAGCCTCAGGTTCAGCCTCAAGCCAAGGCAGGGTTTCTTGATACACTACAATTTCAAGGTCCTGTCAGACCCTCTTTCAACTTCTTTCAACTCTCCTAACTTCCCCCGGCTTCACCAAGCAGAGGTGAAATCACCACCACACACTAGGGGTTGGAGGTTTCCTCTTAGGACCAAGCGTTTGGAGTCCTGCATCCTTGCCATGCTAGGGTCTGGGAAAGGTGCTGTATCATAAGTGCACCCATAAATTCTTCGCATTGCTGTGGGAGGAGGTTCTTCTTAATTAAGGCTTTGAAATAAACTGATTTTCAAAGTTCACGAGCAAAGCAGGGCAACCACTGCAGTGAGCCCTGAAACTGACTCCCTTTCTTTATTTTCTTAGTTCTCAGTGATACTTAAAACAACTAGGAATACTGAAATGTAGTGACAGTGATACTTGATACTATCACAAAAATTGGAGCTTTTGGCAACTTCAGCCCACTTCTCCATACAAACTAATGGACAGGCCTTCATAAGTTTAAATGTTTCCACGAAACCTGAAGTTGCTACTAAAGCTGAAGTCTAAATAACTTTGATCCTGAATATATATTGAAGAGCAAAATGACAAATCAATTAAGAGTCAGTAGTACCTGAATTGCCAGGTGTGGGTGGGTGATGAACAACCCATTTTATGTACATTATGCACTGCAAAGATTGGAATAATTTCCAAGTCACCAAATACCGGATTGGGCAGTTTCAATGTGTAATCTCTATACCATTCAAATAGAATAAACTTAGATCTTTTGAGATTCAAATTCACCCCCTTGTGGGTGGACTCTGATAATTACTTCGTTGCACAGCAGATTCTAAATATGAGGCATTTCGCATGCAGTCAGGAGGCTGGAAAGAATGTTTTTCATCTTGTTGGGAGGAGATCTGAAAACTTTGAAGATGCGGCTGGGCTGGTGGTCGAAGAGCTTGCGTAACAGATGGTTCTTTAAAACATTTTTTAAATGCTGGGCCTCGGCCTCAAGTGGATGGTCCCATCAGACAACAGAATGAAAAAGTACAGCCTGGACTGATCCTTGTATTCCGTGTGGAAACACAGGTCACTAAAACTGGAAAGTCTGTCGCTTAGATGATCTTGGGCTCCAGTCGAGGGTCTTTTAAAAGTGAACGAAGGGACTAGGGAGCAGACTGGGGAAAGAGGAGTCGCTGCCCCTTCCTCTAATTCTATGAGTGAGCTCTTGGCTTGTGGCCCGCCTCTCATTGAGCTGACCCTCGGCCCCTTCAGGGCGCCGGGGCCCACGTGTCGCCTCTTCAGGGTCTCAGTGCCCTGGGGAGTTGAAGCTGGAGGACCCTTGACCGCAGACCAACTCTGCATGTAAGAACGGTCAGCTAAATTTTCTCCTTTCAATGGTTTAAGTGGGTGTTTAACTCCCTTCATCTCCTCATCCGACACACTAGCAAGGGCACACGCCCACCCGCGCCCCCATCCCTTCTTCTTGCTTCCCCTCAGATCGAGGAAATTGCCGCTCTGGCTGCTTCTCCTTCGCCGCCACGCTCAGACAGAGGTCGCTTCTGACTAGCTGTAAGACCCGGCTGCATTTACATCCCCCCGCCCCGGGCCAGGGTGGGGTGGGAGGGGGTGAGGCGGGGTGAAGAGGTTGGGGCAGGCCGGGGGACTGGAGCCTGAGCCTCATCCTTATTGGCTGGCGGCTAGTGTCCGACCTGAGTCCGGAACCCGCGTCCGCATTCACTGTCTTCACCCCTCAATCCAGCCTTCCCCCAACCCCTGGCCCTACTTACCTCCTTCTCCCCCTCGTCTTCCCCCCTGTCCTTCCCAGCACCGTCACCCTCGGGGCTGGGAAGGGCCGTTCTCGGTCCCGCGCGGGGAGTGGACCAGGCAGGAGAGGGAGGTTGGAACTTCACAACTCCACACTTGCGATAGTGAGCAAGAGAGAGGCAGAGAGAGATAGGGGGAAGGGGCGGAGAGGAGGGGAGAGAGAAGGGAGGCGAGAGAAAGAGGAGAGAGACCCCTGCCGATCCTGAGCCAGAGGGCGGTGGAGGGAGGGGAAGGAGTCGCCCGAGCCGTCCGGGAGCAGTGGCAGCGGCACAGCCGGGGCGGCAATAGCAGCCCCGCGGTCGCCTCCGCTGCCCGCCGGGAGCTCGGCGGTTCACGGCTCCGCGCCCCGGGCAGCTGCGTCCTCGCCACCGCCGCCGCCTGCGCCCTTGCGGAGCCGAACCAGAGGGCCGGGACGCTGTCTTCCTCGCCTCCTTTTTTAACCCTGACCTCCTCCTCGCAGCTTGGGGGCGGCTCCGGAGCTGCGAGACCGGACAGGGCTCAGAGGTCCTGCCCGGCAGCCCCGAGGAGGCGGAGGCACGCTCCGGCGAGGCGAGAGGGTTGGGTTAGCAGGCATCCCGGTCGCCCCTTCCTTCTTTTCGCCGGAGTTGAATCTGTGCTGCCCGTGTCCAG
Seq C2 exon
GTGCTGGGCTTCCGGACCGACACGGATCCCCCATCCCCGCCCGCGGTCGCCTTGTCATGCTGCCCAAAGTGGAGACGGAAGCCCTGGGACTGGCTCGATCGCATGGGGAACAGGGCCAGATGCCGGAAAACATGCAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000116833:ENST00000367362:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.935 A=NA C2=0.674
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Rat
(rn6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
- Pre-implantation embryo development