HsaINT0186329 @ hg19
Intron Retention
Gene
ENSG00000167384 | ZNF180
Description
zinc finger protein 180 [Source:HGNC Symbol;Acc:12970]
Coordinates
chr19:44988572-45001424:-
Coord C1 exon
chr19:45001336-45001424
Coord A exon
chr19:44988647-45001335
Coord C2 exon
chr19:44988572-44988646
Length
12689 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGT
5' ss Score
10.67
3' ss Seq
CATCTGTTTTGCCTTTTCAGGAT
3' ss Score
12.14
Exon sequences
Seq C1 exon
CTCAGGACCTCAGCACCCTGCTGTGCCTGGAGGAGAGCATGGAAGAGCAGGATGAGAAGCCCCCAGAGCCCCCGAAGGCCTGTGCACAG
Seq A exon
GTGAGTGGAGACCCAGAGCTTGGGTCTGTCTGCAGCCTGACCCTCTCAGCTTGGGAGGCTGTGGCTCCTCCCTGACTCTCTTTGCAGCCTTTTAGGGGGTTTGGGGCCCTCATGGCCATCAGGCTTCTAACACTTACTATATATTTTATGAATCTCCCTGCTAGTTGCCTCACCTTTTTAGCCCAGATAACTCTTTCTGGAAGGAATTTGGCATCCTGAATCAAAAGCCCTTAAAATGCTGATTCCCTTTTGGCCAGCAATTCACAGCTTTGAGAATGAACAATTGGAAATATACTAAATGTGCAATGTAAGAGGATAGCTGAATGAATTACGATAAGACCATGAAATAGAATACACTGTAGCCATTGAAACTGATGATAATGCAAATTTAATGACAGAAAAAGTTATTTATTACCTATGTTAAGTAAATTGCACTTAGAAATCATCACTTTTTAAAAAGGGATATAGTTTTTGGGTATATAGAAAATATGTTAGAAGACTATAAATATAGCAATCAGTTAACAAACATTATCTGTAGTTGTTTTATCATTTATTTATCTGTATTTTCTTTTTCTTTTCTTTCTTCTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTCATCCAGGTTGGAGTGCAGTGACACAATCCTAGCTCACTGCCGCCTCAAACTTCTGGGCTCAAGCCATCCTCCTGCCTCAGCCGCCTGAATAGGTGGGACTACAGGTGGGCACCACCAAGCCTGGCTTATATGTTTTGTGTGTGTGTATTTTAAAAATTTTTTGTAGAAACGATATCTCACTATGTTTTCCAGGCTGGTCTCGAACTCCTGGCTTCAAGCCATCCTCCCACCTCAACTTCCCAAAGTGCTAGGATTACAGATATAAGCTACCACACCTGGCTTGTATTTTCATATTTTTGTACAGTACACTTTAAGGTAAAAATATTAACAATTGGCCAAGCACAGTAGTTCACACCTATAATCCCAGTACTTTGGGAGGCCGAGGTGGGAGGAATGCTTGAGGCCAGGAGTACAGGACCAGCCTGGGCAACATAGTGAGACCCTGTCTCTATAAAAAATTTTAAAAATTAGCCAGGATAGTGGTGTCCACCTATAGTCCCAGATACTTGAGTGGGTGAGGTGGGAGGATCGCCTGAGCCCAGGAGGTCTAGGATGTAGTAAGCTATGATTGTGTCACTGCACTGCAGCCTGGACAACAGAGTGAGACTCTGTCTCTAAAAAACAAGTTAACAATTTAGAACATTTCCCACCGCGAATATTCTTTGAAAACTCTTAATTTCTTAAAACTGTTAAATTAGAGCTTCTCCTTTCTCTTCCTGAACAAGTCAGCCTTGAAGCCGTGAGGTGGGGCAGTGTTAGGGGGCACCTACAGTTGTCAGGACTGCCTGCTGTGAAGAGAGTGTCCATGTGCAGGGTGTCAGTGACCAAGCAGGGTGAGGAGTGCATCTGCACAGGATGACATCCCAGCATAGTCAGAGCCCAAGTAGAATGAAGAAGTTGCTTGTGCACGCGGTGCAGCCCAATGTGGGTGTCAGAGCCCAAGTGGCTGAGGCCAGTGTCCATATATGGAGATCTGGTGTGGGATGATGGGGTCAGAGCAGGTGAGCAAGGCATCCAGAGAGGGGGTGCTTCATTGTGGGTAGTTGGAGCCCAAGTGCAGTGAGCAGGTGTCCATGGTAGATGGGGTGTTGGAGCCAGAGTGGGGTGAGATGTGCACCTGTGTTGGGGGTCAGGTGCAGCCTGGTGTGGCATGTCAGAGCATGAGCATGTTGAGGGCATCATGCGTGAGGGTGGCCTGCAGGGGTGTCAGAGCCCAGCAGCATGTGGAGGGTACTGACACAGTGGGGTGGCCTGACGTGGGCTGTCCAAGTCCAAGTGGCAGAGGAGTGAGTCTGAGAGATGGGGCAGCCTAGCCCGGGGAGTCAAAGCCTAAGCAGGGTGAGGAGCTCCCCTGGGCAGAGGGTGGCCGAGTGTGGGGTGGCAGAGCCCAGGGAGTCTGGGAAAGCATCCATAGGGAGAGGGCGTCATTGTGGAAATGGGAGAGGAACTACCTACAGGGGGCTAGATCAGATAAGTAAGTGTATATATAAGGGACTGGAGCCAGGCGCCTTGCCATCAAATCAGGGAGGTACAGATACGGCAAGAAAGAACATTTGAGTGGACTCTGGTGTGCAGTGGGAATTGGAGGTTTTATTGTGGGCTCATGGTTTTCAGTACACATTAATCTAGAAATATATAGAGATGTGTGCTTGTATCGGTGTGCGTATGTGTGCACACAGATTCCCTGTCTGTCCGCGGAGGGCTGGGAGCAGTGACATCCTAATACCACTACGCATACCTAGTGCCCACATTTCACCTTCTAAATATGTTACAGGTTTTATGGGTTTATTGTTAATGGCTCTTTAGTGTTACATTTTTTTGCTGTTACAAATAGCATTGATATAAATGTTTTGTATGGGATTCCATGTATACATGTGCAATTGTTTTAGAAAGAGTTAAGCAAATATAAGTTTACATTTATATCTTTATCAAAACTACAAGTAAAATGTGTGGGGTTTTGTTATTTTGTTGTTTTTTAAGAGACAGGGTCTCACTCTGTCACCCAGTCTGGAGTACATGGCACACCAGCATAGATCACTGCAGCCTGGAATTTCTGCGCTCAAGTGATCCTCCCACCTCAACCTCCTGAGTATTTGGGACTACAGGTGCACACCACCACGCCCAGCTAATTTTTTTATTTTTTATTTTTTGTAGAGACAGGGTCTCGCTGTGTTGCTCAGGCTGGTCTCGAACTCCTGGGATCATGCCATCCTCCCACCTTGGCCTCCCAAAGTGCCGGGATTACGGGGTGAGCCGCAGTGCCTGGCTGGTAGAATGTGTTTTGATGTGGTCATTGGTGTTCTAATTTAAGCGAGGCACTAGGTGTTTTCTGGGACTCTTAATGGTCCTTTTACCATTTTCTTTTTTGTGAGCTGAATTAGAAGTCTGTTCATTATATGACTTTTGTCACATATTTATTGACTGCCTAACCAGTGTAAGGCCCTGTGCAAAGCACTGTGGGGAAAGATGAGACAGACAGCACTGCCCTGCACGACTTAGTTCTCACAACCAGAAACGCGCTTCTTATACTTTCCAAGGCTACATAGGGAAAGCAAAAACATCCTGTTTGTTGTATTAGTTATCTGTTATTACATACCCCAAAATTTTGCAGCTTAAAATAGCCAATGTTTATTTCGTCACACAATTTCTGAGGGTCAGGAATCCAGGTCAGCTTAACTGGTTGTTTCTGGTGCTCAGGGTCCCTGATGAGGTTGCAGGCAAGTTGTTGTCTGGGCTGCTGACTTCTGAAGGCTTGACTAGGTGGGAGGATATTGTTGCAAACTCACTCAGATGGCTGTTGGCAAGAGGTGCTGTACACCAGAGAGGCCTCTTTCCAGGGCGTTCACAGCATAGCAGTGGATTTCTGCCAGAGCAGGTGATCCCAGTGAGAGAGAGAGAGAGAGCAAGAGAGAGCAAGAGCACTTAGTTGCACACAATCAAGATGAAGCCACAATGTCTTTTATCATCTGATTTCAGAAGTGACACACCATCACTTCTTCCATATTCTGTTGGTCACACAGACCCACCTTGGTACCATTGGTCAAGGACTACACAAAGGCATGAATACTAGGTAGTAAGGGTCTTTGGGAGCCATCTCAGAGTCTGGCTACCACACTTCTCAACTCTGAATGTCTTCTAGTTAATTTTAATTATTATCAGAAGATGAACAAGTACTTGATTTGGACCTGAAGGATATTAGAACCCTGGAAGGGAGAGAAAAATCAAGGGAGCCAAAGTCTTTGCTTTGAACGAAGGCCACGAGTCCAGTGAGCTGATCTAGGAAGAAACCATCTGGGTATTGGGGCATCACCTTAGAGATTTTAGTGGCTCATACACAGGAAGTAGCAGCTGGTCCAGCGAAGGCCTTGAGCCAACTCTGAGCCCTACCTGCCTTCAGGGACTGAGACCAAAACTGCTGCCAAGTAGGTGGTAGAATCTCACCCATCCACTGTCATTCTCAACATTCGAAGTTGTGCAGGTTGTTGGTGGCCCTATGTGGATGGTCTATTCTGTGTATTTCAGGACAGTGAGAATTATTCATGGATGATAAGGTGGGGCAGGAGAGGGAATTTTCTTGTGCGTGAGGACTAAAGGGATCCTCTTGTCAGGATGATTTCTGAGAAAATCAGGGAAGGGAACCTTCTTTCCAGTGCTGTAGTTTGTGAAGATTGGTTTTACGCCTTCTAGATTTGGTGATTAAGAAACCTCAGGGCCTCCCACATGGGCCCTGTGGACGCCATATCCCTTGAGCTGAAATGTGAGCTCCACCTTCCAGCTCCCAGGGCAGGAAGAGATGGAAACACACCAAGAAGTCTGCCTGTGTGACGCCTGTGTTTTCTAAATGTTCTCACAGATATAGAGGGTTTCCTGCCAGTAGACCCCCAAAGCAAAGCTCTGAGAATTGAGTCCAGTAATATTTCTGTGATTTGATTAGAAACTTCATTTTATTGCCCCAAGAATACCTCAGATTGGGAAAGGAATATTTGGTCATCTCTATTTATAGGTGAGCAAATAGCCCTAGCCCTAGGTCTGATTTGACCACTGTCTTACTATGAAGCGGACAGGTCACTCCATGATAGCTCTGCTTGTCTCTTTCCCCCTGCTTTGGTTCCCATGGGGTCCCACATACATTACAGAAGGAACAATTATTATCTCCTGCCCACAACCCTTTTCTCTGTGCAAGTCAACAGTCTAATTCCTGTTCCCATTTCGTAAAGTCTGCAAAGAAAAAGGGAAATGCTCCTTTATGACCTAGAGAGGTGACTGTTGAACAAGAGGGTAATTTAAAGATGCTCCAGAGCATACAGAAAGTAGAGTAAAAGTTTTTAATTCTATTCCTATGTCCCAAACTCTGCACGTGTCTCTAGTCTTGTCAAATGCAGAGAACTTTTATTGTGCTCCTACTCAATACTGAGGAGAATACAAAGATAAAAAATACACAGTGCTTTCTAATATAGAACCCAGGACCCAGGGGAGAGGTATATAGAAATGGTAGTAATATGAAGAGAATAATTTTACTGGTATAGTAAAGGGCCACCAAAGCTAAGAAGTCCTGAGAGAAGAAGAGATGAAGCTTTCTGCTATCTGGGAACGCTTCATGGAGGAGGTGGCATTTGATCTGGGCCTTGGGTGATTAGACAGACTTTGGTAAGACAGTGGGAAGCAGAAGAGTTTGTGTCAGGCAATCAGTGGACTTAAATGAGCTTACTAAACCTTATTACCGTTAATTTCTGCATTGGTGAAATAGAATAGACATATTACTCTTTTCTTCAAAAAAAAGTTTAGGCCAGGTAAAGTGGCTCACACCTGTAATCCCAGCACTTTGGGGGACCAGCATGGGAGGATCACTTGAGGCCAGGAGTTCAAGACCAGCCTGAGCAACATAGTGAAACTCCCACCTCTACAAAAAATAAAAACAAAAAAATTAGCCAGCTGTGGTGGCGTGCCTCTGTAGTCCCAGCTTCTTGGGAGGCTGAGACAGTAGGATAGCTTGAGCCCAGGAGTTCAAGACTATAGTAGGCTATGATGGTGCCACTGCACTCCAGCTTAGGCAACAAAATGAGACCCTAGCTCTTAAAAAAAAAGTTTAGATGATTTTGTGAGATGGAAATTCTGTGTTGAAGTACTCTATGTATTACTAAAAATACTAGGCAAATGATAGATTACATTGACATTATCTGAAGGAAACTGAGGGAGCTAAGATGTAAATTCAGGAGATATTCCTAAAATGGTCAGTAATCCAAAGTGAGTAGAACCCGGGGAAAAATTCAGGGTGTGTGGGTGTGCATGCATGCACGGGCTCACATGCATTTGTTGCAAGCTTGTTTCTGAGCATTTAGTTTGTAAGAGTAAGTTGGGAGCAGGTTCTGGATACTGACACTTTGAATTTTCTGCAAAGAAAAGGCACCCAACAAAGGTTTCCTCTAACCAAGGGAGGGGCTTGAGCTCAGCTTTGCTTTAGTGCCTCCAGGGACCCCAGGGACAAATGCAAAGTTACAGGTAGCACATTCCATGTCCCTTCTCCTAGTGGCTGTTTATAGTCAGCATACATTTATGAAGAGCCTGCTATGTGTCAGTAGTGATCTAAGCATGGTGGAGTCACGGTAAACAGGACAGACAAGATCTCAGCTCTTATGAAACTCACTCTAGTGGAAGAGTTAAATAAAAAGCCAAAGCTAGAAGAATATATGTGATGTGAAGATATGAAAGCAGGGTAAAGTGATAGAGTTGACTGCTGGGGTCAGGGCAAGGAAGGACATTTCATCCAGAGTCTACCTTGAGGAAAGATGAGCTTTCTTTTGTTTTCTTGTGAAAACTTTTAAACAAAAAGGTGCTAAAAACAGTTTGCATTCAAGAGGAGGTGCAACCATATTCTGCAAGTATAATAGTTTTAGCAGTTATGGCAGATAGTGACATTTTGGAATTTTGTTTCTGCCAAGTACCTGCTGAGAAAAACATTAAGTTGTCCAATTCTTGGTATTATTTCTTAACTGATATTAGCTTTTTTTTTTTAATTAACAGAGTGTGATATTATCTGAAGGAGTTTGTAATAACTTAAAATACAGGTTAGCATTTACAAATTTTCCTTTCTTGAGTAACTTTTCTCATTTCCCAGGCATTTTTTTAAGAAAAGATGTATTTGTCACGGGTGTATATCAGGAATGTAATTTTTCTTTCAGGCCAGATAAGATTGAATCCATTAACAGTTTGGGGTCAAAACTTGTGGCTCCCTTGTACCATCTGTAGTTTGGTTGTGGCTATTTTTTGGCATTGTGAGTTTTATTTTTGTTTTCTGGCATTTTGGGCTATTTTGTAATGTTCATGCAGCAATTTCAAGGCAGTTTAGGCCAGTTGTGGTGACTCACGCCTGTAATCCCACTTTGGGAGGCTGAGGCAAGAGGACTGCTTAAGAACAGTAGTTTTTTTTGTATTGTCTTTTCTCTTTGTTTTCTCTTTTTCCTTCCATCCTCCCTCCCTCCCTCCCTTCCATCCTCCCTCCCTTCTCCTATTTCCTTTTTCCCTTTCTTTCCCTTCCCTTCCCTTCCCTCTTTCTTTCCCTTCCTTTCGCTCTTTCCCTTCCCTTCCCTCTTTCTTTCCTGTCTTTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTGCTTTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTTCCCTCTTTCTTTCCTGTCTTTCTCTCTCTCTTTCTTTTTCTTTTCTCTCTTTCTTTCTCTCTCTCTCTCTTTCTCTCTCTTTCTTTCTTGTTCTTCTCATCTCATCTCTTCTTTTCTTTCTTTTCTTTCGGTCAAGTTTATTTATTTATTTATTTATTTTTTCCCATTTCTAAATTTTTCTTTTTTTTTTCTTTTTTTCTTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGAAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCATTCCGCAGTGTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAATGAACATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACTGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGATCATAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCCCTTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCGTTCTCAATGAGCTGTTGGGTACACCTCCCAGACGGGGCGGCTGGCTGGGCGGGGGGCTGGCCCCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCGGGAGGCTGGCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACAGGGTGGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGCGGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGATGGGGCGACCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTTGCGGCCGGGCAGAGGTGCTCCTCACTTCCTAGATGGGATGGCCGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACAATGGGCGGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCTGGGCAGAGGCTGCAATCTTGGCACTTTGGGAGGCCAAGGCAGGCAGCTGGGAGGTGGAGGTTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGACACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTTGGGAGGCCGAGGCTGGCGGATCACTCAGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAAAAAATACGAAAACCAGTCAGGCGTGGCGGCGCACGCCTGCAATCGCGGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACAGTCCAGCTTCGGCTCGGCATCAGAGGGAGACCGTGGAAAGAGAGGGAGAGGGAGACCGTGGAAAGAGAGGGAGAGGGAGACCGTGGAAAGAGAGGGAGAGGGAGACCGTGGAAAGAGAAGGAGAGGGAGACCGTGGAAAGAGAGGGAGAGGGAGACCGTGGAAAGAGAGGGAGAGGGAGAGGGCAAGGGCGAGGGCGAGGGCGTCAAGTTTATTTTTAAAAGTAGTCTGGGCACAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAGTGTGGGCAGATCACAAGGTCAAGAGGTCAAGACCATCCTGGCCAACATGGTGAAACCCCATCTCTACAAAAAATACAAAAATTAGCTGGGCGTGGTGATGTGCGCCTGTAGTCCCAGCTACTTAGGAGGCTGAGGCAGGAGAGTCACTTGAACCCCGGAGGTGGAGGTTGCAGTGAGTTGAGATCATGCCACCGCACTCCAGCCTGGGGACAGCGCGAGACTCTGTCTCAAAACCAAAACCAAAACAAACAAACAAACAAAAAAGTAAAAGAATAAGGAATGGCTACTCCATAAGCAGAGCAGCCCCAGGGGCTTCTGGTTGCCCATTTTTATGGTTATTTCTTGATTTTCTGCTAAACAAGGGGTGGATTATTCATGAGTTTTCCAGGACTGGGGTGGGCAATTCCCAGAACTGAGGGTTCCTCTCCTTTTTAGACCATAGAGGGTAACTTCCTGACAAAACTGTCATGGCGCTGAGACCAGCAGTTTGAGACCAGTCTGGGCAACATGACGAGACCCTGTCTTCTACAAAAAATAAAAAGGCAGTTTAACTGTTGTAGTATGTGTGGTAGTAATGCAAGCAACACAAACTCTTGGCTTTCACATTGGGCCTTCTTTACATTGCAGCAGCTCTGGCTCTTTGATACTTATTGTGAACCTCACAACCTACCCAGTAAATATACAGTGGTGTTTTTAGGTTTGGAGAATCCTTTCCTACCTTTAAATACATTAATGCTAGCCATTTTTAATAACCATTCCTACTGTAATAGTAAAATATTTTCTAGATAGATAAGGAGAAAAAATTGACACACTTATACCTTGACCTCTCCACATCAAGTGATCCTCCCATCTTTGCCTCCCAAGTAGCTGGGACTGTAGGCACATACCACCGTGCCTGGCTTATTTATTTATTTATTTATTTATTATTTTTTGAGATGGAGTCTCACTCTCTTGACCAGGCTGGAGTGAAGTGGCATGGTCTCAGCTTGCTGCAAACTCCAACTTGCGGTTCAGGTGATTCTCATGCCTTAGCCTCCCAAGTAGCTGGGACTACAGGTATACCACACCTAGCTAATTTGTATTTTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTTGACCAGGCTGGTCTCGAACTCCTGAGTTCAGGCAATCTGCCCACCTCGGCCTCCCAAAGTGCTAGAATTACAGGTGTGAGCCACCATGCCCGGCCTATTTTATATATTTTGTATAGACAGGGGAGCCTCACTGTGTTGCTGAGGCTGGGCTCGAACTCCTGGGCTCAAGTGATCCTTCCACCTCAGCCTCCCAAAGCACTGTGATTACAGGTATGAACTGCTGCACCTGGCCACTTTTATTTTCTTTTAGTTTTTGATCCAATGGCTTCTAAAGAAATGAGTTATCAAAAATTAGCAGTAGTTGCTTTTCAGTGTTTGATTTGAGGAGGAGCAAAGTATCCTTGAATGGGCTATCATTTAACAGACTGAATTATTGTATCCTGTAGGAAAAAACCTGAGGACACTACAAAGGAATTGCGTTGTTTCAAGGTGATTTTTAAAGAGGGAAGCACCTTTCCTGGTTTCCAAATATTTAATTAAAATAAGTGGTTTTGAAAAACATGGATGCAGCATTAAAAGAGAGACAGTGAACCTGCTCCTCAGTTCTACCCCTTCAAAGAATAACTCCTTTTAATGCTTTTGAGAACATCTTTCCAGATTTTTCCGTGCATATTTATATTTTATAGAAATCTATTCATCTTCTGTAAATGTTCTTCATTTTTTCACTCAGCAATATATTATAGACATCTTTCTATTATTTATATGTATCGGTACAGGCAAATTTATTTCTTCTCTTGGCTGCTAAATAATATTCAGTCATCTGAATAAAGCATAATTTATTTAACCAGGCACTTCCTAGTGGACATTTAATCTCCCTTCCCATCTTGCTATGATAATGTAACTTGCTAATGAGGTTTCTTGTATATGCATCCTGATGTACTTTATGTTATTTCCTAAGGATAAGTACTTACAAGTAGACTTAATGGATGTTACATTACACTTTTAAAAATATTGCCTTTAAAAAAACAAAAATAAAAGAATGTACATAAAAATGGAATAAACTCTGTACATGAATTAATAATATTGTACCAAAATTTCAATTTCCTGGTTTTGACAATGTACTGTCATTATATATGATATTACCAGGGAAAGCTGAGTGTGGCTCTATTTTTGCTACTTCTTGTGAATCTTTAAGGATTTCAAAATAAAGCAGTATTTGTAAATACAGATATTTAATATATAGCCAATACAGGAGGGTTGTATCAATTTATACTTCTTCTAAGAATATATGAAGCTCTTGGCCAGTGGGCTGCCAGAGCTGGAGTCATTAGCAACAGACTAATGACTGTGACTGTCACAAAAACACCCGACATGGTCAGGATGTTGGTTATGTACAGGGCTTGAGCAAATAAGTAAATATAAAGAGGAAAATGGAAGCCAGAGAAAGAAAGTATACATAAAGAAAGGAGAAAAGCTAGACAGAATAAAATGTGTTATTGAATTGTAATTGGAGGTATCCATGTGAACTTATGGTCTCTAATATATACAGATAAAGAAACAGATGTTTGATTTTGACGTAAAGAGGCGAGCATCTGTTTGTATATTCACAGCAGTTTCTTCATAGTTGCATGTGCATTTTTCTTTGTCAGTTGAGGCTACCTTTTACTGATTTGGAAGAAGTCTTAATAGTATAGATTCTTATTGATCATGTGGCACCTTTTGCTAAACTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGCCTAGGCTGGAGTACAGTGGCATGATCTTGGATCACTGCAACCTCCACCTCCTGTGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCGTGTCACCATGCCCGGCCAGTTTTTGTATATTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGAACTGCCTGCCTCAGCCTTCCAAAGTATTGGGATTACAGGTGTAAGCCACCGCACCCGGCCTGCTAAACATCTTATGAAATTAATTTGTTGATCTTTTTCTTTATGATTCTGGCATTGGTCATGCTGTATTCCATTTTATTTGCTTATAATTTTGTGACCCAGGAATTTTGGCAGGTCCCGCTGGACAGTTCTTAGCGTCTTAGTGCTCCTTAGTGTCTTGGATCACTCAGTCAGCTGCATTTAGCTGCAATGGGCTGGCCCAGAAGACCCAAAAAGACCTCATGTCCAGGTATCTGTGGGCCTTGGTGCTCCTCCATGTATCTCCTCTCTCTCTCCACATGGTTAGCGGAGCTTACCACTAGGAGGAGGGAGGAGAAATATGGTGGGAGGGATGCGTTAAAATAGGTGGTATGTCAAATCTTAGCCCACTGACCGGAGGAGATTTGAGCTGCCACTTAGCTCCCTGATTATTTTCCTTTTTCTCATCTGTTTTGCCTTTTCAG
Seq C2 exon
GATTCTTTCCTTCCTCAAGAGATTATCATCAAAGTCGAGGGAGAAGACACTGGGTCTCTGACCATCCCATCTCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000167384-ZNF180:NM_013256:2
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.885 A=NA C2=0.360
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)