HsaINT0187007 @ hg19
Intron Retention
Gene
ENSG00000177932 | ZNF354C
Description
zinc finger protein 354C [Source:HGNC Symbol;Acc:16736]
Coordinates
chr5:178489016-178503572:+
Coord C1 exon
chr5:178489016-178489096
Coord A exon
chr5:178489097-178503445
Coord C2 exon
chr5:178503446-178503572
Length
14349 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGA
5' ss Score
9.22
3' ss Seq
GTATGGGTTTGCCATTACAGGAG
3' ss Score
5.8
Exon sequences
Seq C1 exon
ACCCACCGTGTCCACACTCTGCTCTCCCTGGGCAGGAAGACTGAGGAGGAAGGGATGGCTGTGGATCTGCTGTCTGCTCAG
Seq A exon
GTGAGAGTGAGTGAAGGTTGTCTTTTTCATCAGTTGGCTTCTGGATTCAGAGATGGTAGACATGTTTCCAGACTTTGTCCAGGTACTTTTTGGTCCAACCAAAACGATGAAGAATCCGGAACCTCAAAAGTTTTTCCCAGTGTCTTGGGCTTAGCAAGGGGCTGCTGAGGAATGTGCCTCTTTTGTCCCGAGACTACTCTTAATTCACCCCGCTCACTCTGTGATCCACATTTGAGGCAGTTCTGAGCATATGCTTCCCACTACACTGGTGCTGGGTGGGGAGAATGGGGCATGAAGCAGTCTCTGTCTTCATAGAGGATATAGTCACACTTGGGGCTAAGATGTGGAAGGGCCGGAAGACAGCCTCCACAAGCATTTATTGAGCCCTATGTACAGGATCCTGTGCAGCACACGGGATGGAAAGAGGAAAGCTGTCATTTCCATCTTCTGGGAGTTCGTGGTATCGATCTTAGGAAACATGATTAAATGTTCAGGGGAAATATCCCAGAAGTGGGGGCATTCTGAGTTTATACTGGAGGCCAGGACTGATATTGGTGCTTAGAGAAGACTAAGGGCATCCCAGAAGGAGTTCAGCGTGGTTTGGGCTTTGAAGCCCAGAAGGAGGCAGGCCTGGGGCCTTCCCCTCCCAGTGCAGCGGGGATGTTAAGCTGTCCAAATGTCCATCTCACCTGTCTGATTGATTCCTCTATTTCCTTCTCTGATTCTTTTCTTTTTTCTCTGCTAGTTTAGCCTCTCTACCTGGGCTCTTTTTTCTTGTTCTTTCCCCATTTAAGATCCATTTTCATTACTTTAACCCTCAGCGTTCTGAGTATCTTCCCCAAATCTGTCCTCAGGCCTGACCTTTTTCCTAGCATTCCTGTCTGTCATTCCGACGTGGAAGTCCCATCTTTCCTTCAACACCAGCTCCCTTTCCTCTAGTCCCCTCCCTTCTGTGCATTTTTTCTGCCATACTCCAAAGCCTATTCTTCATTGACTCCTTTTCCAATAGCCCATAGGCTGGAAATGTGGACTCAGGAGCTTGACTTCATGGCTTCAAATCCAAGCTAGGGATGTAGCCCTGAGCAAGTTATTTTATCTCTCTGTACCCCATTTCCTCAATTTTGGTGGGGTTAATAATATACATACATGACTGAGTTGCTATGAGCATTAGTAACAGTAGTAGCTGGGCACAGTAGCTCACGCCTATAATCCCAGCACTTTTGGGAGGCCAAGACAGAAGGATTGCTTGAGCCCAGAAGTTTGAGACCAACCTGAGCAACATAGTGAGGCCTTGTCACTATACAAAATTAAAAATAAAGTAGCTGGGTGCAGCAGCACCTATAGTCCCAGATACTAAGAAGGCTGAGGTAGGAGGATCACTTGAGCCCAGGAATTCGAGGCTGCAAGTGAGCTATGATTGTGCCACTGCACTCCAGCCTGGGCACGAGAGTGAGACCTTGTCTCAAAAAGAACCCCAAAAAGTAGTAATTACAAGCATATTTGCTGTGAGCCAGGTTCTATGTATTACTATGTATAAAAATATCTATTCCTTTCATATAGTAAGTCATTTAATCCTTACAAGAGGACTGTTAATATCTGGATTGTACAGATGAGGAGACAGGCACAGAGAAGCAAGTAACTTGATCAAGGTCACACAGCTGGCTTTTGATCCCAACAAGACAGTCTATACTGTTAGCATCATGCTCTGAAAAAGTACATTTAAAATGCTGAGAGAAGTGCATGGCACGTATTAAGACCTCCATAAATTCCAGCTGTTACTATGATCAGTATCAGTAACAGCAGCAGCAGCACTATTTTAGGACCTGCCAGATTTGGTGTGCTTCGCCTCACTAGGCCTGATTCCTTAATTAGAAGCAGATGGATATTTCAGGAAACCAAGACGTAAAGACCAGCAAAATGCAGTGCACAGGAATATCCAGCTATTACCTGGGCTATCTGCTGCCCAAAGGTAGGGTTGTTCGCTATCTGAGCTCGCCTACATCCACAGCAGGAGAGACTTACTTCATTTTAGCCAAGGGCAGAGGTAGGTTTGTTTGCAACTCAGAGCCAGTTTTTGTTGTTGTTGTTTTTGGAAGGGGTGACAGCTGATTCAATATCTAATCCTTTTGTGGGTTTTTGTTGTTGTTGTTGTTGCTTTTTTTTAGAGACAGAGTTTTGCTCTGTCGCCCAGGCTGGAGTACAGTGGTGCGATCTCGGCTCACTGCAGGCTGGAAGGAACTCTTGGGCTCCTGCGATCCTCCTGCCTTGGCTTCCCAAAGTGCTGGATTATAGGTGTGAGCAACTGTGCCCGGCCAATATGTAACCCCCCTTTTTTTTTGGAGACAGAGTCTTGCTCAGTCGCCCAGGCTGGAGTGCAGTGGCGCCATCTCGGTTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACCACACTGGCTAATTTTTTTTTTTTTTGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCCATCTCCTGACCTCGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCCTATGTAACCCTTTTGATTAAGTCTCCTGGGGACCCAGAGTGTCCCAATCACAGGTCTCATTACCCCATTTAAGTCAGTGCAATGGTGATATCCAATATCACATTCTGTCCTCATTAAGGGTACCGAGGGAGAAATTTCTCTCTACTTGTTAGGAAAACTGCAAACAAGCATATTTTTTGGAAAAAAATAGGTTCTTTGCAATATTACATATTTCCATGTAATATATAATTTATTGTCTGGGGAAAAGGCACATGGAATTTGGTATTGATTGCTTAATAGTCATAATTTGTTAATTACATATTTTTCTGCAGTAAATAAGTACTTTTTTGATATTGTCAGTATTTTTAAAAAGAATAATCTTTATTTTTTTTACAACAATTTTAGACGAGAGAATAATTACACAGTTATCATACCCTGCACCCAGCTTCCCGTTATTCCCTACATTAATTTGGTATATTTGTTACAATTAACGAGCCACCATTGGTATGTTATTATTAACTGAAGTCCATGCTTTATTCACATTTCCTTAGTTTTTACCTGCTGTCCTTTTTGTGTGCCAGGGCCCCCCAGGATTCCACATGACATTCAGTTTCACATCTTCTTAGGCTGCTGTGGCTTTGGGGCTTTCTCAGACTTTCCTTGTATGTAATGATCATAATAGTTTTGAGGAGTACTGGGTTAGGTTGTTTTTTGTTTTTGTTTTTGTTTTTTTGTTTTTTTTGAGGTGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAATGATGCGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCAAGTAGCTGGGATTACAGACATGTGCCATCACGCCCTGCTAATTTTTGAATTTTTGATAAAAACGGGGTTTCACCATGTTGGCTGGGCTGGTCTCGAACTCTTGGCCTCAAGTGATCCGCCTGCCTGGCCTCCCTAAATGTTGGGATTACAGGCAGGAGCCCCCATGCCCGGCCCTGATTAGGTATTCTGTAGAATGCCCCTCCATTGTGATTTGCGTGATGTTTTTTCTCATTATTAGCCTGGGGTTGGGTTTTGGGGAGGAAGGTCACAGAGATGAAGCGTCAGTCTGATCACAGCATACTACAATTGCATACTAATAACATGACATCCCTGTTGCTGTTCACCTTCATCACCTGACTGAGGCACTGTTTGTCAAGTCTCTCCACTCTACAGTTACTTTCTTTTTCTGCCTTCCCATACTGTATTCCTTCGAAAGACGACACTGTGTAGCCCACACTTACGGCCTGGCAAGACAGGCACCACTCCTAGAGGTGAAGAATCAACATACATTATTTGGAAATCTGTATGGAGGATTGTTGCTTCTCTCCATTTATTTATTTATTCAAACATTCATTTATATCAGTATGGCAACCATGGATCTTTCTGCTGTCTGTACATATCAATTATGCTTTAAAAACTTTTTTTTAGTGGTTACCCTATAGTTTTCAATATAAATTTACAACTAATCGAAGTCCACCTTCAAATAACATACTGCACCATGGGTAGTGGAGGTGTCTTATAACAGAGTATTCCCCTCTTCCTTACGGCATTGCTGCCATTCATTTCACTCATCCATATGCTATCACCACCCAATACACTGTTACTATTATTAATTTAAGCAAATAGTTATCTTCTAAATCAAGAGTAAGAAAAATGTTATCATCATTTGTTCCTTCTCTATCTTCCCTCCTGTCTTCAGGTAGATTCAAGTTTCTGACCTATTTTATTTTCCTTCCCCATGAAGAACTTCTTTTACTATTACTTGCAAGGCAGGACTGCTGGTAATGAATTCCCTCAGTTTTTGTTTGTCTGAGAGAGCTTTACTTCTCATCCTTTTTGAAGGATAATTTCCCTGGATATTGAATTCTACATTGGTGATTTTTTCCCTCAACAATTTAAATATTTTGTTTCACTCTCTTCTTGTTTACATGTTGCTAATGGGAAAATCCACTGTCATTCTTATCCTTGTTCTCTATAGGTAAGATCTTTTTCCCTGTCTTCTTTCAAGATTTTCCCTTTGACTTTGGTGTTCTGCAGTTTTCATATAATATGCCTAGGTGTAGATATTTTGGTAGTCATCCTGCTTGGCCTTCTCTGACTTTTCTGGATTTGAGGTTTGAGATGTGCTGCTAATTTTGGAAAATTCTCAGCCATTATTACTTTGGATATTCACTCTGCTCTGTTCTCTCTTTCTTCTCCTTATGGCATCCCAATTACATTGTAATTTTAAATGATCAAGTAGAATTGTATTTTTAACATGGAAGGATATACATGCTATATAGTAAGAAGATTTGGAATATGAAATGACAGTAATCATTTATCATTTCTCACAGTTTCTCTGGGTTAGGAATGCAGGTGTGTGAGAGAAACAGCTTACCACACAAAGTCGGGTGTCTCAGCTGAGAGATTTAAAGACTAAAGGCTATAGAATCGTTTGAAGCCTCAGTCGTTCACATGTCAGGTAGTTGATGCTTGCTGTTGGCTCATTGCTGTGATCACAGATAGGGCTATTGGATGGAGCATCTACCCATAATCTCTCCTTGTGACTTGGGCTTACAACATGGCGACTAGGCTCCAAAAGTGAGCATCCAGTGAGCCAGGTGAAAGGTGTATTATTTTACTACTTTTTCTTGGAAGTTACATGCATCATTTCCATTGAATTCCACTGGACAGCTTCAAAGGAAGGAAACATAGAACTCACTTCTTGGTGGGAGAAATGTCAGTGTCACATTATACAAAGAGCACGTAAGATGAGAGAGAAATTGATGTGGTCATCTTGGGAAAGTATAATCTTCCACATTTGTCAGAATTAAAATATGTATAGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCGGATCACCCTGAGGTCAGGAATTCAAGACCAGCCTGGCCAACATGGCAAAACTCCGTCTCTACTAAAAATACAAAAATTAGCTGGGTGTGGTGGCGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCTGTGAGCCAAGATGGCGCCACTGCACTCCAGCTGGCGACAGAGTGAGACTCTGTCTCAAAAAAAAAAGAAGAAGAAGAATGAGGTTTGAGGCTGGACATAGTGGCTCACGCCTGTAATTTCAGCTCTTTGGGAAGCTAAGGTGGAGGAATGGCTTAAGGCCAGGAGTTCAAGACCAGCCTGGGCAACATAGCAAGACCCTGGCTCTACAGAAAAACAAGAGAATTATCTGGGCATGATGGTGCACATCTATAGTCCCAGCTACTCGGGAGGCTCAGGTGGGAAGATCACTTGAGCCCAGGAGTTCAAGGCTGTAGTGAGCTATGATTTATTGCACTACTGCACTCCAGCCTAGGCAACAGAGTGAGACCCTGTCTGTTTAAAAAAAAAGATTTCTCTATGTGGATGTGATAAAGATCCATGAAATGCTAGTAAAGCAGGATTGAGAATTTTCCCATTAAAAAAGGATACATGTGTAAAGCACTGCTAGTTACCTGTAGAATGGGGCCGCTAATTGGAGTTAGGAGAGAATCCCTAACATTGCACTGCGTGTTCTTTTGCATCCTTTCTATTTTTTAGCACGCGTCTGTTTTCATATTGTTTAACGAATAGTCAAAAGAACACGGTGTGTGTAATTGGATCTAAAGTCTGGAATACATTTCTAAAAGAGGAACAAAAGTTGTCTTGAGTAATAGGATTTAGTATGATTTACATTGTGTTTTTGTTTTCAATTTAGACATTTTTTTCTGAAGTTTAATTTGTTTAATTTTAGTCTCTGATTATGCTTAATTTGTATACTTTTTAAAAAGCGAATGAAATTTTAAAAGAAAAAGAATGCTTTTTTTTTTTTTTTCCTGGAAGTATTCTAAGGCCTAGGGGAACGGGATTGGTGGTAAAGACGGAAGTTGGGTTTGCTGTGAGTGTCCTGTTAACAGCAACACGGAGCCTGTATTAGTGTGCCAGGGCACCATAGCAAAATACCAGAGACGAGGTGGCCTCAACCATGGAAATGTGTGTTCTTGCAGTTCTGGTGGCCAAAAGTCCAAGATCAAGGTGTGGGCAAGTCTGGCTTCTCCTGAGGCCTCCTTGGCTGCTTGATGGCTGCCTTCTCGCTGCCTCCTGCCACATGGCCTCTCCTGCGCATGAGCGTGTCCGTGTCCTGATCTCCCCTTCTTAGAAGCACATGCCGGTATTAGATTAGGATCCAGCCTAAAGGCCTCATTTTAACTTAATTACCTCTTTAAAGATCTTGTTTCCAAATATTATTACATTCTGAGGCATAGGGGTGGAAGCCAAAAATAAAATTAGAAGGCCCCCTGCAGCTGTCTGAATGGACTTCCTCCTTGGCCCTTGAAATTTAACCTGAAAGACTGGTTCAGGCCGTGACAGGAAGTAGGGGTTGGACAAGCCTCATTGTACCCTCCAGCATTAATATCTACACAAACCTTAAATCTGATAAGAAACATTTACAGTCTATTCTCTCTAAAGCCTGCTACTTGGAGGTTTCATCTGCCTGACAAAACCTAGGTCTCCACAACCCGTTATCATGACCCAGACATTCCTTTCTACTGATGATAATTCTTTCAACCAACTGCCAGGCAGAATATGTTTACCAAAAATACAGAAAGTAGCAGGGCATTGTGGCACGTGCCTATAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCCAGACTGGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAGAAAGGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGCTCACGAGATCAGGAGATCGAGACCATCCTGGCTAACATGGCGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCCCTGCACTCCAGCCTGGGCGACAGAGCAAGACTCTGTCTCAAAAACAAACAAACAAAAAAAACCAGATATTTACTTTTCTAGCTTTAATTATAGATAAGGTACAGGCTTGTGACCCAAGCTTGACCTACTTCAGACTTTCAGTCAGGAGCTAGAGCTACGAGGAAACAGGAAGAGAACAAAGGTCTCCAACCCCCAGTTTTGCAGACCGGTACCAGCTCCTGGTCTATTAGGAACCAGGCGGTACAGCAGGAAGTGAACAGCAGGTGAGCGAGCATTACCACCTGAGCTCTGCCGCCTGTCAGATCGGCAGCGGCATTAGATTTCATAGGAACATGAACCCTATTGTGAACTGCGCACGTGAGGGGCCCAGGTTGTGTGCTCCTTATGAGAATCTAATGCCTGTGATCTGAGATGGAACAGTTTTATCCTGAGACCATTCCCCCAACCCTCCTGTCTGTGGAAGAACTGTCTTCCACGAAACCTGTCCCTGGTGCCAAAAGGCTTGGGGGCCTCTGATATCGAGTACAGTCTGGTAATTTGTGGCAACATCAGTAACATTGAGTTTGTAGGGGAAGGAGGAGTGGCACAGCAAAAGCAGTAGCTGTCTTGTGCTGGTGAGGCTGTACCATCTACTTTTCCATGACAACAGTATTCTCACAAGTCTGGTTTCCTAGTGTGATCCTGGCTGTGGTCCGGAATGTTGCTGCCCTAGTTTCTGTTTTATTTTCCAAGCCTACTTCTGTGACTATCAGTTTCCCTGGAGCTACCTGGTCTCTTGTGTAAATGAGCCAAAGTCAGTTTCTATTGCTGGAAACCTAAAACAAACTTCACATTTCTTATAATCTTCTTATAAAGCCACCTGCCACAACCCAGATTCTCATCTTGCATTTTAAAAATACAGCTTAGACAACAAGTGTTTCTAAGTGAGAACATTATAAGCATTTTGAGTGGAGTTGTCTTTCCTTATGCAGCACTCTCTCATCCATTTCCAGATGATTAGCAGCCTTGATCGCTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTTGCCCAAGCTGGAGTGTAGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCCTCTCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCTGCCACCAAGCCTGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGCATTTCACTGTGTTACCCAGGATGGTCTTGATCTCCTGACCTCGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCTGACCCTGATCTCTTTTTTTAAATGCCGGCAGGACTCCCTTAGTCACTGTGAAAAATGAAACACCCTCACACATTGCTACTCACTCTAGGGAGGTGGGAGGAGATACCACACGCTAACGAGAACAACTGGATGAGATGATTGATAAGATGTGTTTCAGGTCTGGAGTTCTAGTAGTCGGTCATTTTATCATTTCTTAATATTTAATGACTTTGCCAGGCTCATTTTTTTTTTTTTTTTTTTTACTTTTTAAAATATACTTTCAAAAAGATACATGTGCTTCCAGCTTCTGGTAATAGAGAAATAGCTCCTTTCAGACTAATTCATCTGTGGATAACTACTACACTCTGGATAAAATATAAGAAACCTTAAGGTACTGGAGAGAAATCAAAAGCAGACAGATATTAGACACCTGTGTATATTTGGAAGAAGGAATTGTCACCAGATAAATTTTCTGTTTTTTACAGCTTTTTGCCTGGGAGTAGGCCACAGTCAGCACCAACAGAATAATCAAAACTTAGTCACAAACTTGCAGTCTTACTGGTGTGAATAACCACAAGATAGAGTTTGAGGCAAACTTAGCAGTTGGAAAGTGAGAGGAGGAATCTTGGAAAGGAGAGAGGCAGAGAAGGGAAGCCCCAGATTCTGTGCACAAACTCTGCCCAAATCTCTAGCTGACCCCTGAACCATACATGCACAGGACAGACTCAAAGTAGCCCAAATAAGAACTGAACAAAGATATTTGATGCTGCCCACTAGAGAGGTGGCAGAGTTCGGAATTTGACTCCAACTAAATTAACTACCTGCTTAAAAAAGTCAGTACTCTTCAAAGGAACATAACAAAATCCAGAGTTTCTACACATTGTGTACTGTACAATTTCCAGGATAAGGTAGGCATATGAAGAAATGGGGAAGTGTAACCAAAACTCAAGAGGAAGACAATCAATAGAGACAATGACCCAGATGACCCAGATATTAGAATTCACAAAGATTTTAAAGCAACTACTATAACTGTGCTCAAGGACTTAAAGGAAAATATACATGTAAAGAATGAACTAATAGGAAATGCAAGCAGAGAAATAGAGATTGTGAAAAAAGTAATTCTAGACTATGAAGTTTTAGAACTGAAAAATAAGATACCTGAAATTGTAAAAAAAAAAAATTACTGAATAGGCTTAACTTTTGGAAATGAACATAAGGAGAAGTCAGTGACAGTTGAAGGTAGATTGACAGAAATTATCCTATCTGAAAAACAGGGAGAAAAAAGGCCCTCAGTTACCAATTAAATGATATTAAAAGGTCTAATATACATGAAATTAGAGTTCTAGAAGGAGAGGGGACAAAGAATGGACAAACTATATTAAAAGGAAATAATGGCCTAAAATTTATCAAATTTGGTAAAAAACATAAATTTACTGATTTATAACATTTGATGAATCTCAAGCAGGATAAATACAAAGGAAGTCACAGCTACACACATCATTGATCAGTGACATGCAATAGAAATATAGTGTGAACCAAGAATGCAAGCCACATACCTAATATAAAATTTTCCACCAGCTACATTAAAAAAGTAAACAGAAGCAAATAAATTAACTTTAATAATATATTTTCTTTGACCCAGTAGATCCAAATATTATTTCCACATGAAATCAATATAAAATTATTGAGATAACTTGCATATATGTTTGTGTATGTATGTATGTATATGTTGTATGTGTGTGTATGTATGTTTTTAAGTAAATAATCTGGTATGTATTTTATACAGATAACATATCGCAATTCAGAAGAGCCACATTTCATGTACTTAGTAGCCACATATAGCTAGCTGGTTTCTACCATATTGGGGAAAGTCATAGAGAAATCACAAAAAACAAAGATTTGAAAGGAGGCTGAAAAAAATTGTACTACATACAGAGAATCAATATTTGAATGACCGCTGGCTTCTCATCAGAAACAACAAAGACCAGGAAGCAATAGAATGACATTTTACATGCTGAAAGAGAGAGACAAAAAAAATCAACCCAGAATTCTATATCCAATGAAAATACTCTTCAAGAATCAAGATGAAATAAAGCCATTTTCAGGTAAAATAAAATTAAGCTAATTCATTGCCAGCAGGCCTGTACTATAAGATACACTAAAAAGGAAGTTATGTAAGTTAAAAGAAAAATATACCAGAGGGGAACTCTGATTTTAGGAAGAATGAAGAGCATTAGAAATGGTAGCTATCTGGATAAATATAAAATACTTTTTTTCCTTTCGATTTCTTTAAAGTGCAGCTGATTGCTTAAAGCAAAATAATACTATTGTATTATAGGAGGGGGTTTACAATGTAGGCAGCTATAATACAAATAACCACCATGAAGATAGAATTTATTTACATCTGGACTGGAAAAGCTCTATCTTTTTCTCTAGAAAAGCTCTATTTTTATCTCTGGGAATTCTTGGTGGTCTATTTTTTTGACTCTTGGCCAAAACAAGATAAAGGCAGCATGGTTTTTTGTTGTTGTTGTTTTTTGTTTTTTGTTTTGTTTTTGTTTCTGTTTTTTGAGACAGAGGGCTGGAGTGAAGTGGTGTGATCTTGGCTCACTGCAGCTTCCCTGGGTTCAAACAATTCTCATGTCTCAGCCTCCTGAGTAGCTGGGACAACAGGTGCATGCAACCAAGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGCCCAGGCTGGTCTTGAACTGCTGAGCTCAGGCAGTCCACCCACCTTGGCCTACCAAAGTGCTAGGGTTACAGGTGTGAGCCACTGAACCCAGCCATCAGCTTGTGTAAGTTTTTGTTGTTGTTGTTTTGTTTGTTTTTTCAGAAAGAGTCTCGCTCTGTCTCCCAGGCTGGAGTGCAGTGGTGTGATCTTGGGTCACTGCAACCTCTACCTCCCGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGATGGTCTCCATCTCTTGACCTCGTGATCCGCCCGCGTCAGCCTCCCAAAGTGCTGAGATTACAGGTGTGAGCCACCGCGCCTGGCTAATTTTTGTACTTTTTTTTTTTTTTTTAGTAGAGACAGGGTTTCACTGTGTTGGCCAGGAAGTTCTCGCACTCCTGACCTCAGGTGATCCGCCCACCTCTGCCTCCCAAGGGGCTGGGATTACAGGCGTGAGCCACCACACCCGGCCTGGCTTGTGTATTTTTAAGATCTCAATGCCACTGGCTACTCCTGGTAAGCTTCCTTACTGATGGCTTGCAACTGGCCTAAATGATTTGACAGGACTTGCTTGATTACATAAAAAGGCCCCTGCTGAGAGTTCCTCCTTTGAGCTCTCCCACACCAAGATTCTTCACACAGACCCAGAGTCATGGCGTGGTCTGTGCAAATAAGGGAGACAGCACATGGAGTGTCTCTTGGCTTTCTAGTGCTTCCCTGAACTCTCTTTCTCTTGCTGTGCTGTACCCTTTGCCTTTCAATAAAAACCTTGACATGAATACGCTCAGTGAAGTTTGGTAAGTGCTGTCAACTCTCTGAACTGGGAAAATCTTTGTAAAACTATAGCATAAAGAAGGGTGGTGATGTCCTATATACTTGCAAGATTCTTGCATTCTATGTGAAACGATATATTAGCTCTAAATAGGTGATGAGTAACCAAAAATGTACATTATAATTATTCGAGTAACCACTAAAAATACAAAGAGGTCTAACTACAAAGTCAACATATAAGTTAAAATAGGCCAAGTGTAGTGGTTCACACCTGTAAGTCCAGCATTTTGGGAGGCTGAGGCAGGAGGTGGATCATGAGGTCAAGAGATCAGACCATCCTGGCCAACATGGTGAAACCCCGTCTCTACAAATATACAAAAAAATTAGCCGGGTGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCTGAGATCGCGCCACTGCACTCTAGCCTGGGCGACAGAGTGAGACTCTGTCTCAGAAAAAGAAAAAAAAAAAATAAGCTGGTGGTATGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAATGAGCTGAGATTGCACCACTGCACTCCAGCCTGGCAACAGAGCAAGACTCCATCTCAAAAAAAAAATTATAAATAAAATAAAATAAAATAAAATGGAATTTAAGAAAATTCAAAGCAAAGGAACACACATACATACACACAATCTCCCTAACTGTAAAAAACTGTAAGCCTAATGATAGGGCATAAAGTAATAAGTGAAAGATTGCTTTTCTGCCCCTCTCCACAAATATCAAAGAATAACGAGGGTGACAGCTTGTATCCTTCCAGATAGTTGTGCATGTGTCATATATATGTATATACAGATGTAGAGTTTTTCAACAAATATAGATTCTTTTGTGGCTGGCTTTTTCATATGAATCAATAATATATGAAGGTCAAATTCCAGTGTCATAGAGATCTACCTCATTCTATTTAGCGGCTGCATGACGTTTCATGGAATAAATGTACTGAAATTTGCTTATCCATTCCCTTATTGATAGATATGTAGGTTGTCTTCAATTGTTCACATTGTATTTCTTTCTTATTGCTGCTGTAACAAATTACTACAAATGCAGCATCTTGAAACAGCATAAATGTATTCTTTTACAGTTCTGGAAGTCAGAAGTCTGAATTCAGTTTTACTGGCTTGAGGTCAGGCTGTCGGCAGGGCTGGGTCCTTCTAGGGCTCTCAGGGGAAAATCTGTTTCCTTGCCCTTTTCACCGTCTAGTGGTTCCCTGCAGCCCTTGGCTTGTGGCCCTCTCATCCATCTTCCGAGCCTAGCACTCCAGTCTCTGCTTCTGTCATCACATCGCCTTCTCTTGAGAAAGATCCCAGGCTGGTATTTAAATTGCCTGTTGGCAGGAACTTTGCCTGTTTTCCCCTACTCCCACTGCACGTGGCATGTGTCATTGTTCTCAATGAGTACTCCATAAATACTTTTTTAATTAAATAGCTAATGGGTGGTTCCAAAAATTACGTAAACAGTTGACGTGAATTATTAGAATCCTGAGATTTTCTGTACATCCCACTGTCACTTTCTTCCTGCATTTTCCGTTGAAGAAGATGGTCCTGGGTGAGCAGGTATGGGTTTGCCATTACAG
Seq C2 exon
GAGCCTGTGACATTCAGGGATGTGGCCGTGTTCTTCAGCCAGGACGAGTGGTTGCACCTGGACTCTGCCCAGAGGGCCTTGTACCGGGAGGTGATGCTGGAGAACTACAGCAGCCTGGTCTCACTGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000177932-ZNF354C:NM_014594:2
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0135222=KRAB=WD(100=95.3)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm9)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)