HsaINT0188447 @ hg38
Intron Retention
Gene
ENSG00000204524 | ZNF805
Description
zinc finger protein 805 [Source:HGNC Symbol;Acc:HGNC:23272]
Coordinates
chr19:57240685-57248700:+
Coord C1 exon
chr19:57240685-57240921
Coord A exon
chr19:57240922-57248604
Coord C2 exon
chr19:57248605-57248700
Length
7683 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGT
5' ss Score
10.67
3' ss Seq
CTTGCTTTCTCCATAAACAGGGT
3' ss Score
9.37
Exon sequences
Seq C1 exon
TGGCGGCGCTGGGGAAATGAGCAGGTAGGAGGCCGACAGCGACCTCCGCGTCTCGGAGCGAACCGTGAGCCTCCCCGTAACGAGAGAGTTTGACTGTCAGCCAAGGTCACCGGGCCCGGCGCAGGGAAGGGGTGGGGCTCGGCTGAGCCCGCGAGACCCGCCCTGCTCGCCGCAGCCCCCGCCCCGCTAGGGCCACAGGGTCCCGGTATGGCGATGGCTTTGACGGACCCGGCGCAG
Seq A exon
GTGAGTGGACAAGGTTTCGGCCTTGCTGCTTTTCTGCTAGTTCGGGGAAGCCTCCTGGGCAGGCCGGAAGCCAAGACAGCCACAGGATTCCTCTTTGTAGTTTTGTTTGTTTACGAAACGTGGAGCAGGCTCGTCACTTAGTTTATCTCCTGTCGTGGTAGTACCTGAGAGACTGAATATTGAAGCGGACAGTAGGCAGACTATACATCGATTATAGGGCTGTGACGTACAATTTTTTTGTAGCAACCTGCCCAGGAAACCAGCCTCCTGTTCTGCAATAAACTACTCTGGAAGCCAGTCTGCCTTAAGTTAGTCTTGCAAGGAGCTAGATTACTCTCTGGTGACATTTCAGGAGGCTAAACGGTAACTCCTGGAACAGTAGGCCCCAAATAGGACTTGATTTGTAACTGACTGTTCTAATTTTTGCCTCCGCCTCCAAAAGAGGACCAAGCAGAGAAAGCCATACGTGCTCAGCCTAACCAATCACATACGATGCCCCACTTCTAGTTAGCCCTTCTGCAGCTTTCCACTGCTAAAGTGTCAGGCCTCTGAAAGCTGCTTAATAATTGCTTGAAGGATGGATGAAGTTCCACTCCAGGGACTCCCGTCACACACATCATCCGAACTCAGCCTTGGCCTGCAAGTCCCTACCCGGTCCACTATGGCTGACCACCTCTGTCCTTGTTTCCTTCCTTTCCTCCCTGGCTCAGCGCTTCAGACACAGGTCCACTATGGCTGACCACCTCTGTCCTTGTTTCCTTCCTTTCCTCCCTGGCTCAGCCCTTCAGACATATCAATCTGATCACGCAGAGTTCTTTCCTACCCCTCAGCCTTCACCTTTACAGTTCATTCAGCCTCAGACACTATCCTCAGATCTCTGCAAGACCCTTTCACATCTTGTTGGCTCTGCTCAAATGTCACTTCTTTAAAGCGGCCTTTCATGGCAGTTCAGACTAAAGTAGTCCCCTTCTCACCTGCCCTTGGTCTAGCGTTTTTGTATAGAGAATCTGGCAAAGTTTTAGACACCTACTGAGTTGAGGTCTTAAAGGATTTTGTGGGGACAAAGAGCATAAATAATAACACAAGAACTGTAACGGTTGGCCTTCATTGAGTCCTTGATGTGAACTGAGAAATGGGCATTATTTATCATCTCATTTAATCCTGATCTCCTTAAAGTGACATTCTATTATAAACACTGCTGTACACAAGAGGAGGTCAAGACTCCGACCTGTTTAGTTACCTGCTGAAAGTCACATAGCACTTAAGTAACAAACTCATATTTAGCGTGTGGACCACCAGAGCCTTTGTTTTTACAGACAGTTGGCTGAGAAGCCCTGAGGTGAACTTTGCAGTCTTTCCAGCAAGTCACAGTGGCCATTGGAAGCGAAAGGCAGACATTCCACTAGAGAGGACTGTGTAGACAAAGGCAAAGTGTGTTGGTTGTTTAAGGAGGTCCAAGAGGACTTATGAGGTTACCATGGTTCCCCCCATCCCCACCTGCTGAGACATGGCCTGGAAGGGCAAAATCCTGTGGTCTTTTGTTGGATGTTCGTCCTGCCTTCAGCCTATAGGGCATTTTGGCCAGTCATAAGCCTGGGTTCTCATGACCACAGCCTGCATTATCTTCAGCCACTTGAGTTTTCTGGTCCTGAAGCACACTGGCCTTAGGGATACCTGCTGGCAGGACTCAGGGAAGGAAAAGGCTAATGGTTCATTATGCAATCTCCCTGGGGTCCAGGGGAGAGGATGAGCTGGTCCAGGCACTGCCCCTCGTCAGGCATTTGGTACTTGTGAATTTGGTGATGAGGGTTTTGCCCACATCTTGGGGATATTTTCAGGAGCTGCTAAAATAGATTAAATAGCAAAAATATGTAGAAATGCTTCACAACTGTATTATAGTAGATTCACGTGGGTGGTGGAGGATTATTGGGGTCACAGTATTAAACCCTGAAGCAGAGGGACCTGGGTTAAAATCCTGTCTCTTATATATAAATCATGCTTATAACATGTAAAACTCTGGCTGAACTTGGTGCTCACACCTGTAGCCCCAGTGCTGTGGGAGGCTGAGGTGAGAGGATCACTTGAGGCTAGGAGTTCGAGACCAGCCTGGGCAACATAGCAAGATCCCAGCTCTACCAAAAAGAAATAGTTGGGCGCAGTGGTGCGTTCCTGTAGTCCCAGCTACTTGGGCGGCTAAGGCAGAAGGATTGCTTGAGCCCAGGAGTTCAAGGTTACAGTGAACTCTGAGCATGCCATTACACTCCAGTCTGGGTAATAGAGTGAGACCCTGTCTCTGAAACAAACAAACAGAAAACACAAAAGACTAGGAGAATCTGTGGAGCTCCCTTAGCCTCAGGTCAGTGACTGTGACATGGAGGTGATTGGCGGTGGTGTTTAGTAATACTTCAGGGGCTGTGGGAGGATTAATAAAATCCCAAAGTCCAGTAAGCTCTGAATAACTCATGTCTGTTATTGGGAAAATGGGAATTCTGTATTCATCTGAAAATTGAGGCAGAGATAAATGAGGTCCCTGAGGTCACAAAACTGGCAAGTGTCAGTTTCAGGAGTTTGGATTCAAACTTGAGAAGTCTGACTTCAGAGTTTGGGACTTGTAGTTGCTTTAAAACAGAACATGAAGCTTCAGCATGAGCTGGACCAGTGAGGCTCAGGCACTGTGGTTGTCAACATTATTGCTATTATTATTGTCACTATTTCCTCATTTCTTTGAGGTCCTCGAACTCTAATTGTCTACATCTCGCCATCCACGAGTTATTGCCATTGTCTTCTGTTATTCTTTGATGGCTCCTATATAGGAGGCTTTTCTCTTTTACATTACAGTAATCTGTCCAAAGCAATGTCTGCCTTCCTCCTTCAGCCTGGTACAAAGTTAGGCCCTCAGGAGGCCCTCAGTGACTTGGGCCTTGATCTTGTTGCACCTTTTCCAGCAAAGCACATGCAATAGTCCCACAGCAAACTCTACTACCTCTATTTGACATTTCAGGTGTCTGTGACCTTTGATGATGTGGCTGTGACTTTCACCCAGGAGGAGTGGGGCCAGCTGGACCTAGCTCAGCGGACCCTGTACCAGGAGGTGATGCTGGAAAACTGTGGGCTCCTGGTATCTCTGGGTAAGGCCTTCCCCCTCCACCATGCAGGGGATCTGCCACCTCCTTCGTTCCACCCTCTGACTCCAGGCCTGATGGGTCAAGAAGTCCTCTCTTACTGGCCTTGCCTCCTTCCCACAAATTCAGTCATTTTCTACAACACTCACCTCTTCCTTTTTTTTTTTTTTTTTTTTTTGAGAGGGAGTCTTACTCTGTCACCCAGGCTGGATGCATTAGCACGAACTCGGGTCACTGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCCAAGTAGCTGGGAAGCTGGGATTACAGGTGCCCACCACCATGCCTGGCTAATTTTTGTATTTTCAGTAGAGATGGGGTTTCACCATGCTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGCCCGCCTCGGTCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACGCCTGGCCTACACTCACCTCTTCCTATACAGTCTCCATGCATCGCTTTGGACAAGAAATAAGAGTACTCTTTGGCTCTCAGCCAAAGGAGAGAAGCTGGTGGAAGGAAATGGGGTGTTTTGCAGACCTCAAAGGTAGGATTGCCAGCTGTATGTTATGAGGGGTTGAAGTAGGAACTGAGAACCGCCACGATGGGGTCCTGGTTTCTCTGTCTGGGTCTGCTCATGTCACTGTCTACTCTGTATGGTTTTTTCTGCCTCAGCGAGTTCAGGGGAAGAGTAACCACCCCAGGTTTTACTGTTTGTGACCCCTCCTTCCCCTCCAGATTTCTTGTCTGTTTCTCTGGCCTCTGTGGGGCGTGTTTGAGGCAGCAAATGCTGCTCCACCTCCAGCTCATACTTGCCTCCATCTCTCACCCACTGCCCAGCATAGACTGGCCTCTGTCTGCAGTTTTTTTTTTGAGTTCCAGAGCGGGATCTGCCTGGGTGGGCCTGGTTGCTCATGTATCTGCTCCACAGCCCAGTCTGTGGTGTAAGGGTTGGTGGGATGTTCACTAAGAAGGGTTGAGTCAGGCAGGCCCCAAGGAGACATTGACCTTCCGTCCCACCAGGTGTTATTCTAAACAACCTTCACGTCCTTCAATCACCTTCACATCCTCTGATTCTAAAGTCACTCTGCTGCAGCCTTGCTGGGCTTCTTGCTATTTCCCCAAGTGCCCACCCACCTCAGGCCATTGCATTTGCTGTTCTCTTTGATGAGTGTTCTCAGGGTAATTCAGCATTTCACATGGCCGCCCCTTCTCAGCACCACTTGCCTCCTCACCCAGCCCTTCCCTGACCACCGAATCTTGGGGAGGCCCCTTTCTCACCATAGCCTCCTCCCTTTACCTTTTTAATGTCTTTCTAAGCTAGTGTTTCTCAAACAGGGACGATGTTGAGCTTCAGTGGACACTGGGCAATGTGTGGAGACATTTTGGTTGTTAAAACTAAGATGATGGGCCAGGTGCGATAGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGATGGGCGGATCACAAGGTCAGGAGATAGAGACCATCCTGGCTAACACGGTGCAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCTGAGATTGCACCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAACCTAAGATGATAACATTGACAGCTAGTGGGTGGAGATGCTGCTAAACATCCTTATAATGCACAGGACAGATCCTTTCTCCTCCTCTTCCCCCGATCTCACAAACAAAGAATTACCTGGACCTAAATGTCAATTGTGCTAAGGCGAGAAGCTCTTTTTCAGAGAGTGCTTGGACAGACACTACATCAGCTGGTGCTGAGAGACACTTGAGGAAGTTGTTCTTTTATTTCTTCTCGTCTTGTCTCCTTAGCATTTGAGGAAAACTCTGGTTTAGTGCTGAGACTTAACGTCCTGCAAACTGTTGGTAATTTCCCCTTTTCTACAGAGGGAGCAGCCTTAGGCTCACAGCCCTGAACAAGCAGCATGAGCTCACAGGGACCAAAGAGCACTGTTTGTTTGTCTTGAGACAGAGTCTCGCTGTTGCCTCGGCTGGAGTGCAGTGGTTTGATCTTGGCTCACTGCAACCTGTGCCTCCTGGATTCAAGCATTTCTCATGCCTCAGCCTCCTGAGTAGCTAGGATTACAGGCAGGTGCCACCACGCCCAGCTAATTTTTGTATACGTTGTTTTGATTTATTGCTACATTTTCATGGTTACCTGCCATCAAGACAAGTGACTCTGGATTTTCCATTTACCAGAGTGATAAGGATTCCATTTTTGAAGAAATCTAAGAAAAATAAAAAGTGGATCACTTTTAAGAAAAGCAGCCCGGGCATGGTGGCTCATGCCTGCAATCTCAGCACTTTGGGAGGGCAAGGCAGGCAGATCACGAGGTCAGTTGATAGCGACCATCCTGGCCAACATGGTGAAACCCCGTCTGTACTAAATATACAAAAATTAGCTGGGTGTGGTAGCGCATGCCTGTAATCCCAGCTACTCAGGAGGTGGAGGCAGGAGAATCACTTGAACCAGGGAGTTGGAGGTTGCAGTGAGCTGAGATCGCGCTACTGCACTCCAGCCTGATGACAGAGCGAGACTTCGTCTCAAAAAAAAAAAAAAAAAAAGAAAAGCAGTTAACAGTCCAGATCCCCAGAGCACTGATTGGGTGTCTCAGGCCTGTTCCAGGCAGTGTTCATGCTCCATTTATTCTCACAGGATCCCTGTCCTCAGCAAAGTAAGGAAAATTTAGCCACTCCTGTGAGTCCCTCATCCAGTTTAACTTACTCAGCACAGATGAAACACCTTCATTTTATGAAGCTATCACTGAATGTTTTTGTGTAGAAAAAATTCTTCTCTTGTGAACTTTTTTTTTTTTTTTTGAGATGGAGTTTCACTCTTGTCTCCCAGACTGGAGTGCAGTGGTGCAAGATCATAGCTCACTGCGATCCTCACACCTTACCGTCTCCAGTAGCTGGGACTACAGATGCGAGCCACTGCGCTGCTATATGAAGTTTCTGTAAATATCCTTATGTCACCATATCACAGTAGGATGTTCAGTCTTTAAATATTTTAATGGTTCGTGAAATGCTGGGGTCTGGAGTCACTGACCTGCCCCTCATCCTGGCCGCTGGTCCCTGAGGATGAATCCTCCAGCTCACATCTCTGCCTCGTCACCACCCTCTGCCACCCACTCTGGTGCTCGTGGTTTCCTCCTTACTGTATTTCTTGGGAGAGTAGGGTTTGAAGCCAGAACGCTGGTGTCCAGCCCCAGCTCTGCTCTTTAAAAACTCCATGGCCTTGGGCAAGTTACTGAACTTGCCTGTGCCTCAGTGTTCTCATTGTTCAAATGAGGACTTAACCATATTCGCATCCCAGGGCTGTTGCCAGGGTCAAGGGTTATTTTATGAAAAGGCTCAGAACAGCACCTGGGAGACCAGGCTGCGTGCAGGGAGCCATTACAATCTCTGTTTCCACCAGTACTATTACCGTCGTCCTCATCATGATTATTGTCGTTGGCATGCCTTGACCTGGCACTTTCTGGGCAGCGTTGTGGAGCTTTGTGGTTAAACAGCACAGACAGAGATGGCAGGACCTGGGTTTCCTTATTGACTCAGCCATTCTCCAGTTCTGTGCTCTTCAGCAAATCACTTTACCTCCCCGAGCCTGGGTTTCTTTGTCAACAAAATGGTGTTGATTATGATATGGACTTCCTGGGTATACCGTGAGGAAATCCTCAACTGGAATCCTCATTTAATGGCTAGGCATGGTGGCTCACGCCTGTAATCCTAGCACTCTGGGAGGCCTAGGCGGGTGGATCACCTGAGGTCAGGAATTCAGGACTAGCCTGGCCATCATAGTGAAACCTCATTTTTACTAAAAATACAAAAAAATTAGCCAGGCATGATGGCACGCGCCTTTAGTCCCAGCTACTCAGGAGGCTGAGTGAGCGGAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGACGCATTTAGTCTTTGGTTTAGAGGAAGAGCATTATAAAACATTGCTTAGGATGTTAAAAAAAAAAAAAAAAGACTTAGATAAGTGAAGATACATACCTTGTTCTGAATGAAAATAATCAATGTTTAATATTTAAAGTGTATCACTTTTTCTCTAAGATATTCCATAAATATTGTTCACTTTTTAATGCATTTAAATGCTTGGCATAGTCCCCTGGACATGGTTATAGCCTATAAATACTAGTTTTTGACTTACTATTAGGAGTAGAGATTCTGTGGCAGCATGACATGCCCTGCCCTTGGTTTCTAGATCACGTGCTAACTTTTTGTTCCCATGGATGGGTGTAGCTTCATTCCAAGGTCTGGTCCCCATCCTGAAGTCCCAGACTAGATTGAAGGTCTTTATTTCTTTTCACCCACATCCATGTGTCCACTTGCTTTCTCCATAAACAG
Seq C2 exon
GGTGTCCTGTTCCCAGACCTGAGCTGATCTACCACCTAGAGCATGGGCAGGAGCCATGGACCAGGAAGGAAGACCTCTCCCAAGGCACCTGTCCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000204524:ENST00000354309:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.455
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0135222=KRAB=PD(0.1=0.0)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains