HsaEX0074387 @ hg38
Exon Skipping
Gene
ENSG00000204524 | ZNF805
Description
zinc finger protein 805 [Source:HGNC Symbol;Acc:HGNC:23272]
Coordinates
chr19:57240685-57248700:+
Coord C1 exon
chr19:57240685-57240921
Coord A exon
chr19:57243923-57244049
Coord C2 exon
chr19:57248605-57248700
Length
127 bp
Sequences
Splice sites
3' ss Seq
ACCTCTATTTGACATTTCAGGTG
3' ss Score
8.7
5' ss Seq
TGGGTAAGG
5' ss Score
9.08
Exon sequences
Seq C1 exon
TGGCGGCGCTGGGGAAATGAGCAGGTAGGAGGCCGACAGCGACCTCCGCGTCTCGGAGCGAACCGTGAGCCTCCCCGTAACGAGAGAGTTTGACTGTCAGCCAAGGTCACCGGGCCCGGCGCAGGGAAGGGGTGGGGCTCGGCTGAGCCCGCGAGACCCGCCCTGCTCGCCGCAGCCCCCGCCCCGCTAGGGCCACAGGGTCCCGGTATGGCGATGGCTTTGACGGACCCGGCGCAG
Seq A exon
GTGTCTGTGACCTTTGATGATGTGGCTGTGACTTTCACCCAGGAGGAGTGGGGCCAGCTGGACCTAGCTCAGCGGACCCTGTACCAGGAGGTGATGCTGGAAAACTGTGGGCTCCTGGTATCTCTGG
Seq C2 exon
GGTGTCCTGTTCCCAGACCTGAGCTGATCTACCACCTAGAGCATGGGCAGGAGCCATGGACCAGGAAGGAAGACCTCTCCCAAGGCACCTGTCCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000204524_MULTIEX1-1/2=C1-2
Average complexity
S*
Mappability confidence:
100%=100=100%
Protein Impact
In the CDS, with uncertain impact
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.455
Domain overlap (PFAM):
C1:
NO
A:
PF0135222=KRAB=WD(100=95.3)
C2:
PF0135222=KRAB=PD(0.1=0.0)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Cow
(bosTau6)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
CCTCCCCGTAACGAGAGAGTT
R:
GAGGTCTTCCTTCCTGGTCCA
Band lengths:
245-372
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development