HsaINT1008455 @ hg38
Intron Retention
Gene
ENSG00000095713 | CRTAC1
Description
cartilage acidic protein 1 [Source:HGNC Symbol;Acc:HGNC:14882]
Coordinates
chr10:97865000-97880392:-
Coord C1 exon
chr10:97880249-97880392
Coord A exon
chr10:97865715-97880248
Coord C2 exon
chr10:97865000-97865714
Length
14534 bp
Sequences
Splice sites
5' ss Seq
TGGGTGAGT
5' ss Score
8.73
3' ss Seq
GGCCATACACCTCCCTACAGGGA
3' ss Score
6.39
Exon sequences
Seq C1 exon
ACACCAATGAATGCATCCAGTTCCCATTCGTGTGCCCTCGAGACAAGCCCGTATGTGTCAACACCTATGGAAGCTACAGGTGCCGGACCAACAAGAAGTGCAGTCGGGGCTACGAGCCCAACGAGGATGGCACAGCCTGCGTGG
Seq A exon
GTGAGTGGGGCCCCAGCCATAGGCCAGTAGCAAAAGGATGTTGCTTTCCACTGGGGAGCTCTGGGTAGGCCCCAGATCAAGGTCCCCAGCCCCTTCCTTCTCCTGGCTGGATAGAGTCTCCTTTGACCCATATTGGGTCTCCAGGGAAGACCATGACAGAGGCTTGGAGAAGCCCCATCACTTCTACCATCACCTGAAGGGCCAGGGGATGCTGTGTCCTGGCCTGAGGCTATCATTCTTCTTACTTTTCCTAAAACAACTGTTCCTACCTTGAGGTCAGCCCGTATTTTCATAGCTGGGATATAAACTAACTCCTACTACTCATCTTTGGCTGAATTTCTAAACTGGTAATTTCTTCTTCCCAAACTCCTTCCTCCACCCCCACCCCGTCCCCACCCCCTTTCTCTTTTTCCCATTTTCTGTCTCCCCGCCGCATCGTTTTTGCAGCTCAAGTGGCCTTTTTAGGTGGGTATTCTTCAGCCGCCTCTAGAATCTCTGAGCCTCTCTCTCGGGCCTCATATCTTTCTCTAGGCCTTGGACTTTGCCTTCAGTTATATGCACTTTAAATCCCATCAATAAAGGAAAAAACAAAACAAAACTAACAGCCTTTGTGGAAAACTAAATCTCTCTCCTGCTGCTTGTCTCTCTCTCCACGCCCAGTAGGTTCTGCTGTGTGCTCCCTCTGAATGGACAACAGGGGTGGCCATCTTTGAAAAGGGAAGGTTGGGCGATACTGACACAACCTTAGTTGTTTGTGAAGACTTTCTTTGCATGTTTTCTGAGAAAACAGAAAGGAAAGTCTCCAATACCCCATCCAGTCTCCCTCACTCCTTCAGAAGAATCAAGATAGTCTTGTATCCTCCAGTGTCTCGTGAGCTCATTATTTTGCCCTTAACAAAGATGGCTCCCAGGTGGTTGCTTGCCGGTTGATCCGATAATGTACCATGTGCCTGCTGGTTTGGCCTGTGCTGTTTCTGCTTTTTGCCCCTGACTTCCTGTGCTAGAGAAAGCCTTATTGGTGTTGGTGGTGGTGATGGGAGGGAAAAGGGTGGTCCTTTGGGACTCTTGATAAAAATGTTATCATTTGAACTTGCTAAGCCTTCCAGCCTCTTTTCTGAAGAAATTATGCCAATAAACTCTCTACTAGATATTAGTGCCAAACTGATGATAAAAAGGGTCTGGGGCAAGTAGAACTGATTGGAATGCTGAATTAGGAGCAGCCCTTCCACCATGAGATGCTTTGAAAGCAGATCATAACACAAAGCAGGTGTCACCCTCAGGCACCAGCAGTGGTTTGGTTGCGTACAACAATGTTCACATTTGGGGGACCAGGGTTTGGGCCAAGTGAAGGATGTGTGATGAGTGAGGGGCAGAAATGGAGTGTGTACTCTAGGCCTTTTACCTGCAGGAAGTCACTTCTCCATGCTGTGCCTCAGTTTCCCTAATGTAGATGACAAGAGAGTTGGGCTGGTATATCCCTAAGGGCCTTTCCTTTCTAAGACTCCTCAATGTCTGGCTGGACATAGGCCTGGCTCATCTCAGGTTACTCTGATTTCTAGAAAGAACCTTGCTACTTGGTCTCTGCAATCTCCTTGGAAAATAGAATGCTCCTGTAGCCAGAACACTCTTTGGAAATGATGTAACGCCACAGAATATGCTCACGACCAGCCTCAGTAGTGAAGGCTTGTTATAAAACATAGATCTATTCTTCATGGGGAAAAAAAGTCATCCCAGGATATAATAAAATTACACTTAAGAATGCAGCAACCCTTTTAAAAACATATTCAACAAAAAAAAAGCCCCTGCCATTTTCTGATATCATGGTAATACTCCTAATAAATCACAAAATATGAATTCCTTGTAGCTAGTGCTGTTTTTACACTTAGAACAGAAGCATAAATGAAAAGTTTTTAAATTAAAACAGCTACAATTTCCCTGAAAAGCAGACACCAACTTAAAAATCATTCCACTTCTAGAAAGCCCATTCCTGTGTATTGACATAGAACTAAAGATCTGAAAGGGCTCCAGAGATGAGGCTCAGAGAGCTGAAGTGTTCAAGGTCACTGTGCCCAAGGTCATGGAGCCCACTGCTCCCCAGGCCAGGGCTGGAGCCCTTTCCCACCACACCATCTTGTCAGAGGGTAACAGGCAGCTCTGTCACTGTTCAGACTATTCCCTAGTCCTTCTGGAAGCTGCTGCCTTTTAAAAAATGAACAAAGTGGATCTAAGATAGTGAGATAAGTAAAACCCAAAACCCATGGAGGAATGGTTCCAAATGCAGTGGTAAATGACAAGATAACAGAGCCCATTGACTGTCCATACACAACAGCACAAGAAATAAGGGACAAGACAACTACAGAGATGGCCTGCCAAGGACATCAGGGGGTTCAGGGTGACAGCAGACTTCAGATGATGCCTTATAAGTGACAACCATGAATGCCTTCACAATGAGTTTTATATAACAGGGTATATCTGTGTCATGTGATCCTGTTGGGTGAGTGGGGTCCAGTGAGTTGCAAAGAGGAGTTCTAAGTTCCCACAGCTGATAAGAGCACCACTGCAGCACTCAGACTCCAGGATAAGGCTTCCATTTGATTCATTCATGAGTTCAACAGATACTGATTGAGCACCTACAATGTGCCAAATATTTGGTTAGGCTCTAGGCGTACAATGGTAAATGAAGGTAACAATGGTAAGTAAAAGTAATATGTGTTGATCCCCTACTACTATGTGCAGGTACTGAGCTAGGCTCTAGGCATACAATGGTAAGTGAAAGCAATATTTGTTGAGCCCCTACTGTGTGCCCAGTACTGAGCTAGGCTCTAGGCATACAATGGTAAGTGAAAGTAATATTTGTTGAGCACCTATTATGTGCCAGGTACTGAGCTACGCTCTAGGTATGTAATGGTAAGTGAAGGTAACATTGTTGCCACCCCTACGCTGCCTTCCCTCCAGCCAGATAGAGGAGCCAAGTGCATGGGATGGGAGTGGGACACCAAGGGGCTTTCTAAAAAGTTGAGCTGAATTCTCAGGTTGCTATACCAGAAAGCAAGCTCTCTGCATTCATTCATTTACATATTCATTCAGCAAGCATTTATTGAGAATATCCTGTATGACAAGCACTAGGTTCCTCCCATGAGGAATGTGATAGAGACCCTCTAATGAGGTGGACAAGTCCCCTGCCCCCAAGATGCTTGTGTTGCAAGAGATACAAGGCTGAAAGATACAGAGGACAGGTGGATAGTGAACCCACTCAACATTACCTACCCCCTTACCAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAGCCTCCTCATTGAGCTAGCAGTACAGGCTTTTTGAACAGGTGCCTCAAATTCAATGCATCTACTGGTCTGTGCTATACCAGCCACAGATTTGCGGGTGCAAAGCCACCCCCAAGCTACCCAGGCTCAGCATTCCCATTCCCCTCTTTCTTCTAATCCCTTTCTCTGAGACCCGTGGGAGCCCAAACCGTTCCGTCCCCTCCTGCACACAGATAAGTCTGTCTTTTCCCTGTCCCTTAGCCCCACCTAGGCTCCTGACATCTTTGTTGCCTTATGCTACACTTTAATTTGTAACAAAAATAACAAATGCCTTTAGGGGCAGTCAAGTAATGAAATGGACCCGGAAGGGATTATGCAAATGGAGGAGCTGGTGCCCCACCTGCCTGCACCAGGCAGCCACAACTCACTCCAGTGGGAAGGTGGGCCAGTGCTGCCACAAAAATGCTCCCCATTTTTCAACAAAAAAGAAATAATAAGAATAATACCATTTTTATTCTGCTCAAGAATACTCCCTCTTCACAGGCACATACCCCTTAAAATGACAATAATAGCTTACATTTAGTGGGCTTGGCGTGTCTGGGTTGAATCTAAACTCTTTACAATAATCAACTCGTTTAATCCTCATAATAATCTCAAGAGGAAGGTATTGTAATTATCCCACGTTTACAGATAAGCTAAATGGTTTGTGCAGGGTCATACAGCCCAGACAGACGAAGGCAGGACTGGATCCCAGGAGTCTGGCTGTCAGCTGGCACTCTCAACTACCACTCCCTTCTTCATTTGGGATGGTGAATTGGTTTAAGCAAAAGCCACAGTCACTCATGCTGCCCAGGATCAAGAGCAGGATTGGGAGGGGAAAAATGGAGCCCCTGGAGGCCTAGTGATCTGAAATAGTCCTCCCCACGGTCACGTTCAAGTCTGCAAGAAGAGGTGGCAGTGCTTGCTAATGTCGAGAGTCCCCTCGCCAGGCGGGCTCAGCCAACCTTCACTGAGGCAGAATGGTAAACCATCCACTAGGCCTCTTCAAGCATCTACACGGTTGCCAACCCTACTCTGGGAAGGTGCCATTCTGAGGGCCAGGAGTTTGATTATGTGTCACTCTGGCTGCTATGGCCCCCTCCCAGGGTCTGGGTATCACACCCAGGCCAGTGCCACTGGACCTCGGCCGAAGCAGGAACTCCGCTCCAGACTCCAAGAGCCCCGTGTAGACAGGAAGATGAGCACTTCATTTTTGCAGGGAGCCAGCCAAGTTCTTCCAACAGATTCCAGGCTGAACCTCCACCCAGACTTCCAGCCCAGAAGGCAAACCGAGCCCCTCCCTGCCTCCCTGTGCCCAGGGCCAGTCTTCTCTGAGGCCAGAACCCCAGCCACAGGGGCCAGGAACATGCCAGAAGTTGCTGTTGTGTCTGTAGCAACAGGCATATCCTGGAAGGAAGGCAAGAGAACATGGGCTGGTTAACACCACAGATGACGCCAGCCTCTCCCACGGTGGCTTGTCCTCTAAGGAACTACTGTTGACAGTGAAGTGGTCAAAAAATAGGCCACCAGAGGGAAAATGAGACGCAAGAGAGAAGAAAAACATCCTCCAGGAAAGCAGCTAACATTTATGCAATGCCTGCCATATGCCAAGAACTTTACATCCATGTCTCCATGAATACTCACACCCATCCCAGAATATAAATGTTATGAGTCTATTTTATTACCAGAGAAACTGAGACTCAGAAACAGTAAATTACACAAAGTCACATAGCTAGCTAAAGTGGCAAGAGCTGTAATTCAACCTCATGACTAGCTCCAAAGCCTGGGTTCTTAAGCCTTATGCTGTGCGATCTCTAGGTAACTGACACTGGGGAAGTTATTTAACCAGTTGTTCATGTGATGTACAGTGACTGAACGCCTACTGTGTGCTGGATGTTGTTCTAGTGGCTTGGGATATACATCTGTGAACAACACTGGCAAAGGTCCCTGCCCTAGCAAGACGTGGCAGGCACTAAACAATACCCAGAATAAGGAAAGTCTGTAGCATGTTGGAGCATGATACGTGCTATGGAGGGCTGGAGAAGAGTAACATCAAGGCCATCCGGGAAGGCCCGGATGGAGGTGGAATGCCATTTTAAATAGCGGCGGGGGCAGGGGGGCTCCCTGAGAAAGAGGCATTGAGCAAAGACTTAAAGTAGGTAAGGTGTCTTTGAACCTCAGTTTTCCCATCTGCAAGATGGGGATAATACCTCACAGAGTTATTATATTAGACTTGACATGGTGCCTGGCACATAGAAAGCCCCCAACAAATTAGAGATACTATTATTAAGTAGCCACGTTCAGGATGGAGCCCCGGGCCCGTTCAGTGCCAAAGCTCCTGTGCTTCCCGGTACACCCTGCTGCCACCCAGGACACCTGTGGTGGGAGAGATGGGCAGGACGGGGCCACCTCTGGAGAACTGACAGATTCACCAGAAAAAGATGGCAAATGGCCATAAGGTGCAGAGCCAACCTTCCTGGGGCCTGGGCTGTGCTATGTTCTGCTGAATTCTCATGCAGTGCCATTCCCAGAAAGAATAGTCATAAAACAAAGTGAACTGAGCTAGGCGGGCATGGCATGGACTGGGCCATACAGAGCAGAGGTCACCAGGAGCTAGTGAACTGGCCTGGGAATTTGGCCCTCAACAATCACAGAATCCTAGAGCTTTAAATCCAGGAACACCTGAGAAGTCATCTAGTCCTCTTCCCTCCTTTTCAGACGTGGAAACCAAGGCCCAAAAAGGAGCTGCAACTTTCCCAAGGCATCTGCACCCCCGTCTGGTCCTTTTTCCTGCCGGGTTGCCGGCTGCTCCTCAAAAGAGCTCAGCTCCAGGCTGCTCCCAGCACCCTTCTCCAGAAAGCTCCAGGTATTCCAGAAGCCCAAGTGTATGAACAAGATCAGGAATAAGAGAGGCAGGGCTTATCCTTCCCACTTTGCTGACATGGAAACTGAGTCAGGATACGTGCCCATCAAGTAACAGAAGAACCATACTTGGTCCTTAGAACTCAGCTGGGATTAAATACAGATCTGAATGGGGGTCCCGAGTGCAGAGAGGAGCCTGTTCAGCTGTGAGGAGGGAGGCAGGGTCAGGAGAAGGGTGCGGCAGATGGAGAATCTGTATCACCCGTTCCCAGAACGTCCCGCCCAGAACCTCATGCCCTCAGCCTGCCTGCCAGCAGGAAAGCAGTCTGGGGCCAGAATAATTCCCCTAAAGCTAGCTGGTTCTCCTTCTTCATGGCCAGCCCCAGAGCAGCCAGGAAGGATCTCATCCCCTAGAGTCATTTAATGCACCCTCCCCACAAATCTAAGGGCTAACTTCCCTCCCTCCACCCCAGACCTGGCTGTAGAGCTCCTGGAACAGGAAAAAAGCACATCCTCTTTCCCCAACTGCTTATGGAGACCATGGCAGAAGGACAAGTTTAGGCCAAAGGAAGGAAAGTGAGCCAAACATACACCCTCTCTGCAGTTCAGATCCCCAGACTCAAGGTTTAGAGCCCTCGAAGGCTGACACAGAAGAAAGAGGGAGAAGGAAGCCTGGGGCTGCCCTCGTGTCACCCAGTCATTGGAAAGTCTCAGTGCCTCCTCCCACTGCAGAAGGTGTCTCACATGTGCCAAAATGCCATGTTCGTTCTTAGAGCTGTGCACAAATCCTATGGCCCTCCCCTCTCCCTTCCTTTCAACTGTCCTTAAAATTTTCCCTTCACACTGAAACTCTGGGATCAAATGGACTTGAAATCCAGACCCTCCACCCAGGCATTTGGAAGTGGCCTTAAGAAGTTGTTTCATCTCTGAGCCTCAGTTTCTTCATCCACAAAATAGAGGCAGTGATAAAATCCTCATAGAGTTGTTGTGAGGCTTCCTCGAGCCTATAAGGTACTTGCTGCAGTGCCTGACTGATGAAATGCAGATATTGTCATAAAATCTGTGCCAGGACGTTTAACCTCCTGGTTTCACTTCCAGCAATGCCTGACTTTAAAACAATCCATAAGCCATTAGCTGGGGCAATATTAGACCTATAAGGATTCTTCCCAACAAGACACATCCATCACTCAGAGTTACAAATGCGGAGTTCATCTGGGGACTGGGATAGCACGGCATCTTCCCTTTGAAGAGCTCCAGCCCTATATTTAGATCTGCACTGGGGAGCCCAGGGGCGATCGGTACCCATCCATTCACCTGCCTCTCCAGGGTCTGCGAGCATCCATCTCAAGCCAGGCAGGCCTCTCGCTCATCTCTGATCTATCAGTCATCTCTCTATACCCATCTTCTCTGTATCCATCCACTTATCCAGCCAGCCAGCCATCCAGCCAGTGATTCACTCACAGTAATTCACTCTCTAGGGCCTGAGGTCCAGATCTCTCAGGTAAAGAATTCAGCACCAGAAGGATTTTCCCCACCTCAAAATGGTGTTTGGGGAGTGTCAGGCAGGGCCGACTGGGGTGGGACACACGCTTCCTCCCCTCCTCTCCCAGGATAGGTAGAGGTCATGAGCAGAGCCACAATGTCACAGCTAGGGCAACATCACTGAGAGCTGCTGCCCAGCTCAGGGGGTAGCCTGGGGTCACTGCATCCATCCTTTAATTGAGTTATAAGGTGACCACTTGCAGGTGAATTGTATCCTTCAGTGACCACTGCCTATCTGCATGGTACTGAGCTGCTTCTCAGTGGCACCTTGCCCTAGGGGTCTGCAGATGACACATCTGTATAGGCCTGCCTCTTCCTGCCAACCTGAGATGGGCAGCATCTTCCATTCACCTGGCCAGGGCCAGGCCCTGAAACAAGCACTCAGGATAGGGGGAGGTGGGGGTGGGGGTGGGGAGTGAGTAAGACAGGCTCCCTGCCCTTGAGAAGTGTACTGATTAATTGTGGGCAGCAGGGAAAAGGACCCTCGCAATCTCTGAGGTCTTGTAAGCTGTGTGTAAGCTTGTGTGTAACATTGCCCCCTTCTTGGGGCCTCACTCAGCACTGTTCTCAGGTGATAGCTGGTTCCCAATCACTTTTCCATTACAGAAATCGATAACTTGAATTACTCCAAAATAACTAGTACCTTCATGCCCCTGCAAAGCTAATTTTTCTGGGGATGCATTTGCCCACGAGTTTCTCTCTGGTCTGGAATCTGTCTTCTATCTTTATGAGTCAATCCAGGTAGAACACTCTCTCTTCTCCCACGTCTCACTCTTGTGGCAGAGTGAGAGTGGGATCTGGAGTCAGAGACTTAGGTTCAAGTCTTTGCTCTGACACTTACTAGCCCTTGTCAAGCTACCTAACCACCTAGAACGTCAGTTTCCTCATCTGTAAAATAAGATTTCAACACCCCAGTGTTCGAGAATTAAATGGAATAATAATGTACATGAATGTTCCTGGCATTTATTCGGGAATCAGTGAACCCTTGGATAAATATCTGTTTATTCTATGCCAGAATCTGAAGCCTGCTATAAATCTACATCATGAGGCCATCGTATAACGAGGTCCTAGTATCACTTCTGCAATAACAATATCTTACATTGGAGAAACAGATGATTATTTATAAATATACACATTCTCATAATGACAAAGGTGAGACTCAGGAAAGTTAAGTGAATTGCTGGGGGTGGGAAAGGGGGCAGCTGGCACAGCCCTCTGACTCTCTTCACAGTTTCCCACTTCCTCCATTGTCCCTGATTCAAAACCCGACGCAGCTCCAGGATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGAACATCCTCTTGGAGGAAGAGTTGTGAGCTTGGTGCAGGCTGCCCTTGGCACTGCCAGGGGAATAAATCCTCCTAGAAGTCGCCCGAGAAGGCTCATGCGGAAACCTCCGAAGGCTGGGCTCTGAAAGGAAGGAAAGAAACCGACATTACCAAGCATCTCTTTCATGCCAAGCACATTCATGGCCAGTTTCTTACTGACTCCTCAAAACCAATTGTTCTTAACCTTTTTAGGGGGTTGCATACCCCTTTGAGAATCTGCTGAAAGCTGTAGATGCTCTCCTCAGATAACGGCACATAATATGCACCTGAATGCAGTCGGGTCGAGGTTAAGAACTCCTGGTGTGAACCTGGGCTGTTTTCAGATTTTCTTAGGCATCAGGGACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACACACACACACACACACACGTAACATAGAGTTGCAGTTGTCTGTTTGGCATATGTGTTACATTTCCAGATATTTAACAAAACGTTAATTTCAAGTGTGTCCTTTCTTTTCCTATTTTGTAGCCAACAGGCTTTTCTGGTGAATTTTATTGAAATATATCACCAGTACAGACAAATACACAGCTCTTAAGTATACAGCTCAGTGAATTCTCATGAAGTGAGCACCCCGTGTAACTGGCACTCTGATCAAGAAACAGAACATCCTGAGCTCCCAGAAGCCCCCCAGGTCCCCATCCATTCGCTACCCCCGACCCAGGGTAATCTTGATCCTGACTCCCAATCAAAGGCGAGTTTGGCCTGTCTTTCAGTTTCATATAAGGGGAATCACATGGTGCATATGCATTTTTGTGTCTGGCTGCTTCTGTGGAACCATAAACTTCTTATTCAGGTCTCAGGCATTTTCAGAGGTGTATTAAAGGCTTATAGGCTATAGGTACTGTCAAAACCAGGGATTCTCAGCCTTACCTTCACATTAAAATCACCAGGGAAACTCTTTAAAATCCTGATGCCCAAGCTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTGATTTTTCATGCTTCCAGTTGACATCCATTGCCACCAAGGTTGAACGCCTCGGGTCTAAACAACTCTGTGAGATATTAGTCTCCCTATTTAACAACTGGGGAATCTGAGGCTCCAAGAGTCTTCATGTGTCAGTGTCATGAAGCCAGAGCTCAAATTCAGATCTGATGTGGAGTGGTGTTTGCCTTGCCTTATCCCTGGGTGAATGGTAAAGCCCAAACCAGGTGGTGATGCCTCCTGTCTGGGCCCCCCTCATTGTGAGTCCTTCTAGAGGTGTGGAGAGGGATGTGGAGTTTCCCAGGCTCGACAGCCCAGGGGCTGGCCCTAGGGAGAAAGTCACCAGACTCCACCTTTGCCCCACACCTCTGGAAGCCACAGAAAAGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACAACAGCCATAGTTCTTTCTGTCTCCACCTTTGATTCCCCGAGTGCAGTGCATAATCCTGCCACTCAGTGGCACCTCGAGCTTCTGTAAACCCTGTGGTTTCACACACACCCGCCCTGTGGCCAAAGGAAGGAAGCCAGACAGCAGGGTGCTGGCGCAGGGAGAGGAGCATGTGCAGCAGGAGCTTCCTGAGGCATGCCTGAGTGGCTGGGGCCTCACTTGGGACCTCGGGGACAGTCTGGCTGAGGCTGGAGCTGCTCCTGGGTCTTGATGGGGCCTGTCCCTGGCTGGCAAGGTGGGTGCAGGGACATGGCTACAGCCAGACCCCGGAGAGACAGGCCACCACCTGTAACTAAGCCAGCAGAGAGAAACCACACCTCCCCAGGCCCACAGTGAGTCGAGTCCCCCACTACCCTTCACCGGGCTGCCTCTGGGTCCCGCATGCCTGCGAGCACAGCCCATGCACCCTCCCGTGATGCCCTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTTCCCTGGGAATCTGCCTGATCCTAATCCCAGGACGGCTGAGGCCCTCAAGCTGTTAAGCGGCCTCTGAGGCTGGATCTGTCTTCTTCCTTGCAGTTTGGAGTCAGATTGCCTAGATTCAAAGCCAAGATCTGCAATTTCCCAGTTACTTAACGTCCATGAGCCTCAGTTTCCCCATATGTAAAATGGGAAATAAGAATCCATGCCATAGAGGGTTGCTGTGAGAATTGAATGACTAATTATGTAGAGTCTTAGCCTAGTGCCTGGCACATAGGAAGTGCTAAATAAACGTCAGCTACTATTATTATTATGATTACCATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGTTTTACCCGTTTAGTAAATCCTCACCCCCTCCCCAGGACCTCATCTCTAGAAGAGCTGAGTTTGGATTCAAATCTGGCCTCGGGGTAGAACAAACTTCCTATCCCAAAACAGAATGAACCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGTGAGTCCAGGCTGCACACAGCTCACTGCAGCCCTTAGCGGCAGTGACAACAAACATGAGAACCACCCAGAGGGGACTGCCCAGCCCCCACCTAAGAGGCTGGAGCCGTTGTCCCCACAGTCTGATGAGCCCCTCTCTGGGAACAGGCCTGAGTTTGTGATCCCAGCCTCCCTGCAGCCTCAGGCAGCTTCCCATCTGGGTGCCATCCCTGTGGTAACAGAGTGGGCACTGAGTCAGGAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTAGGGCAAGTCACCCACCCTCTCTGGACCTCTGTGACAGGATTCAAGTGATCTTTAAATCCCCTGCCAGCTCTAACATATGGTTTCAGCAAAGTATCTGGCACATAGTAGGTGCTCAATAAATTATAAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTGATCTTGGCCAAAAGGCCGAGAAGTGATCATCCAGCTACTTTCTCATCTTCAGTACTGAGTGACCTGTGTGATCCAGCTCCCAACAGGACCCAACCCAGGGGAAGAGCTCAAGAAATGAGGATTTATTGATATCATTAATTGATTACTTTTGGCCTCGCTTTCAGTCCAACCTGTTCCCCCACCCAAGGCTACAAGTGCCCCAAAGATTCCAGATTAGAGATGCTGAGGTGTCTGCCTCTTCAGTAGACTGCAAGCTCCAAGAAGACAGAGTTCATCCTGCTCCCCATGTCAGGTCCAGTTCAGGCAGCTGAGTATCCCCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAAGCATCACAGAGCTTCACGCTGGGCAAGTTCTTTTATTGGAAAAAGAAAAAAAAAAAAAAGGCCATAGCACTGCCTGTGCCCAGCCCTCCCATGGGAGATGCACAGGTCAGACACAATGCCCAGCCCCACAGGGGCCCAGGGAGGGCATAGGCCGTGGCCAGGGGCTGCGGTGGAGCCCACTGAACTGCGGCTCTCCAGGGGGATCCTTGGACCAGGACTCACTTGGGCCGAGGACTTCCTGAGGCTGCAAGGACTAGGCTGACTCTCTCTGGTCTCTGGGTAGGCCCTTGTATCCTACATGCTGCTCCCATGTCTGGTAGAAAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACATCCACTTCTAACACCTCCCGCCAACTGAGATAGGCAGCCCCCTTCATTTCATCTTCGGGACACCAGCCCCAGGGGCTGCTCCCATCCCACCTGCTCCTCTGGGCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACCTCACCTACAAAGCCTTAAAGAGCCCCAGCCCCTGGGCAGGCTGAACACACAGTGTCTGCAGCCCCGTTGTCTTGTCATGGGGAGCTGAGAGGGGGCACCAAAGGCCACCAAAGTTTGGCTCTTCTTTCCTAGAACCCCGGCTTCTCTTCCACTAGAACATATGCAGTAGAGTATGTTCCCTGGTAGCCCTAGGGGAGGGGCAAGGGGCTTTTGGACATTTACTTACAGGGGGTCAGGCTGGACCCACACAGGGAAGAAGTCACAGACCCTCAGGTAGCGAAGACAGCAGGATGCAGAGAAGCAGTCGTTGGCCTGGCAGCCAAGGGGAACACACAAACACACTCACACACACATGCACTCACCTGCATACACACACACTCATACACATGAACACTCATACACACATGCTTGTGCACACATGTTCATGCACATGCATGCACTCACACTCATATAAATGCACATTTGTGCACACGTGTGTGCACATGTACTCAGACACACACAGGTGTGCTTATAAATGTGTCCACATTCATACACTTGTGCACTGGTGCACACACATGCGCTCACACACGCGCTCACATACAGGCATGCTAACACACGCAGACTCACACATTTACGCACACTGCACTTACACACATGTGCACTCACACATACATTCACATGTGCATACACACAGGTTCTAATCTCAGGAAACTGGCTGTAGTTCAGGAGATTCAGGCCCCGCATGGCTATGTCTCTTCACGGAGTTTCCCAGACCCCCATATTACCTCCCAGAGCCCCAGGCTCTGTGCCCCCCAACCAGCACCTGGCAGCCTGCAAAGTCTCAAAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACAGGAAAGCCATAGGTCTAGAAGAGGTCAGGAGTGCGCTGAACAGCTCCCAACCACGGCACCCGTCTCCCCACACCTTGAATTTGGTGGAGGCAGGATCATAGACAGGCCGGGGCCCTGCAGGGGCATGAGAAGGAACAGATACTGGGAGACAGCCACGGGACGCAGGGCCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGTGGGAGTCCTCTATGTGGCAGGCCTCGGCCCCCCTCGCAGGGTTGGGAGAGGGGCTGTGGAAGAGAGGGGCCGCCTAGGTTGTGTTCTCCCCACCCCAGCCTTCCTAGGAAGATCTGTCTCTGTGTGGCCCAGACCAGCCCCATCGGGAAGGAAAAGCCCCCAGGTCAGGAAATGGACTGATCCAGACGGGGGTGAGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTCCCTCCCACCCCGGGCAGCAGGGTGAGCCCAAAGAATGACTCAGAAGCGGGTGCTCTGGTAGCGCAGCCGCCGCAGGTCTGCAAGGCCCTCACTCCGGCCATACACCTCCCTACAG
Seq C2 exon
GGACTCTCGGCCAGTCACCGGGCCCCCGCCCCACCACCCCCACCGCTGCTGCTGCCACTGCCGCTGCTGCTGCCGCTGCTGGAGCTGCCACTGCTGCACCGGTCCTCGTAGATGGAGATCTCAATCTGGGGTCGGTGGTTAAGGAGAGCTGCGAGCCCAGCTGCTGAGCAGGGGTGGGACATGAACCAGCGGATGGAGTCCAGCAGGGGAGTGGGAAAGTGGGCTTGTGCTGCTGCCTAGACAGTAGGGATGTAAAGGCCTGGGAGCTAGACCCTCCCCAAGCCCATCCATGCACATTACTTAGCTAACAATTAGGGAGACTCGTAAGGCCAGGCCCTGTGCTGGGCACATAGCTGTGATCACAGCAGACAGGGTCGCTGCCCTGATGGCGCTTACATTCCAGTGGGTCTAATGACCATATCTTAGGACACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTTTAGTGTCCTGAGTTCAAATCCTGATTCAGGAACTCACAAAGCTATGTGACCTTACACCAGTCACTTAACTTGTTAGCCATCCATTATCGCATCTGCAAAATGGGGATTAAGAATAGAATCTTGGGGTTAGTGTGGAGATTAGATTAAATGTATGTAAGACACTTGGCACAAAACCTGGCACATAGTAAAGGCTCAATAAAAACAAGTGCCTCTCACTGGGCTTTGTCAACACGTGA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000095713:ENST00000370597:14
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.324 A=NA C2=0.418
Domain overlap (PFAM):
C1:
PF0764510=EGF_CA=WD(100=95.9)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains