HsaINT1021969 @ hg38
Intron Retention
Gene
ENSG00000115318 | LOXL3
Description
lysyl oxidase like 3 [Source:HGNC Symbol;Acc:HGNC:13869]
Coordinates
chr2:74536709-74549583:-
Coord C1 exon
chr2:74549369-74549583
Coord A exon
chr2:74536929-74549368
Coord C2 exon
chr2:74536709-74536928
Length
12440 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGG
5' ss Score
10.07
3' ss Seq
CCTCACTCCTGTCCCCCTAGGCT
3' ss Score
10.34
Exon sequences
Seq C1 exon
GTAGAGCATCACCTGCAAGTGGAGGAGGTGCGAATTCGACCCGCCGTTGGGTGGGGCAGACGACCCCTGCCCGTGACGGAGGGGCTGGTGGAAGTCAGGCTTCCTGACGGCTGGTCGCAAGTGTGCGACAAAGGCTGGAGCGCCCACAACAGCCACGTGGTCTGCGGGATGCTGGGCTTCCCCAGCGAAAAGAGGGTCAACGCGGCCTTCTACAG
Seq A exon
GTGAGGGGCCGCGGGCGCCGGGCGGAGCAGGCCGGGATTGGGGTGCTCCCTGATGAATAGCCTTGGGAGACATCTGAGCAGGTCCGGGGCACGGGAGGACCCGGGGGTCGGGACGCGCGGGAAAATATGGAGGCCGTTGCAAAGCTGGAGAGTTGGGAAATCTTGTGGGACCACGAAAGGTGCCCCAAGGGAGTACCTGAAATGGGGACCAGCGAGGCTCCCGCTCTCTCGTGGCCGACGCCTGGGCGGGCAGGCGGATTCCTCGGCCCCGGGGCGCGCGCCGGCCTCGCGAGGCCACTCCCAGGCGCGGGGGCGATTCCAGCGCTGGCGCTGCCGGCCAGCGATTTCCGAGTTCAGTAAGGACGCGGCCGCCCCTGGGAGGCGGCGCCTGGGTGTGTCCCGCGCAGGCTGGGCGCCCAGGGTCCGGGGGCCCGGGGACGGCGGCGCGCGATGGCCGAAGGGCGCCAGGAGAGACCGCGCCAGTCTCTCTGCCCGGGCCGCCCCGGGGCGGGGCGCGTATGTGAACGCTCGAGCCCTCGGGGCTCCTGGAAGTCCTGGAAGTTTCCCAGGATCTCTTTTGGCGAGGCCCAACCTCTCCACCTGCGCTGGAGCCCTGGGGTCCAGTCCGGCTTCCAGGGAAACGCATCACCCTGGAAACTGCCTGTGCTTAACGTCTCCCTTCCCTGGAACATCTACTTTGATCTTTTTGAGAAACTGCCATTGACAGCCAGGCATTTATTTGGAAATCTTTACACCCTCTCACTGTAATCTATTTTGCGAGCCAAAAATCCTCCCTTTCTTCAGTGGTTCCCTAGATCAGTATTGCTGAAAGGCCTCTTGATGTCCGGATAGGTTTCCGCGGGCACACTACTTCAGATGGGGTCTGATGCCGCCAGCTACTGTAGAAATCCTCAACCCCGACTGAAGCGTGCTCGGATTACACTGTCTTCCTACTGCGGCAGCTTCCCACTGCTTATACTGAACTTGTCATCACTTAAAACCAGTTCAGGTCTTCCCTATGCTTCCTACTGATAGAGCAGCCTTTTCCAACCCAGGTATAGGTGACGTTTACCTATTACATTTGTTTTGATACATAATTTAGAAGCCATAAAAAAGCCATGATGATCCCATGAGATTATCTTGAGTCCTGATGTGACTTTCCATCTGTCATTTCCCCTCAGCCTCCTCTGCTGAACAGACATGGCAGCTTTGCCTTCTGGCTTCATCCAAATGGCTAAAAGTTGTTGTGGAAATGTTTAAAACCAAAGTCTAACTCTTCTTGCAAAATGTTCCTGTAGATTTTCATCAAGCTTCTAATCATCAGCTGTAAAATATGTTCCTTCCACCAACTGGGAAGAAACAGAACACTTCAATGATGTAACCAACATTTCACCTTATCTATCTATATATTTCTTATCTGTAATGAAATCATGGGAGATTCTGTTAGTTTTTGATAAAATCCAGATATGCTATGTTCACAGCCATTCTCCAGCCTTCCAATTTAGTAATCCTGTCAAAAAAGAAAATCATAGTAGTTTGAGTCTATTTTTACTGAAATCCTTTTAGGTCTCTAAGAATCACCTTATTTTTTCCTAAATGCTTACAAACTTCTATTTAATAATTTATTCTAGAATATTACTTATGTGTAGATTGAGGAATTGAGGAATCCTTTTTCTCCTTTTTTTTTTTTCTTTTGAAAGTCAGGATATTATCCAGTCTCCAGTCTTTTCTATACCTGCTCACACTTTCTTTGCCTTGGCTCTGAGGCTCATCTGAAATGTCTTTCAGTACTGAGGACTTTCGGTACTTTATCTGGCCTGGACACTCAAACCACTTTAAAACAAACGTGCTGTGCCTCTTTACTTTCATCCATCTTGGGGCTGCATTTCCTTCTCTGTGCTGCTTACCTTCCCTAATTTAAACCCCATGTTCTGAAAGATGCGTAGAATTTAGACATTTCCAGTGAAGAAGATAGCGTGAACAAAGGTGTAGAGATCCACTCACCCAATATTTATTTACTGAGATCTTACTATGTGCCAGGTACTGTTGTAGACACTACCCGTGGCTCATGCCTATAATCCCAGGACTTTGGGAGGCCACGGTGGAAGCATTATTTGAGCCCAAGAATTCGAGACCAGCCTGGGCAACATAATGAGACCCTGTCTCTACAGATAATTTTTTAAAAATAAAATTAGCTGAACATGGTGGTGCGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAAGATTGCTTGAGCCCAGGAAGTCAAGGCTGCAGTGAGCTGTGATCATGCCACTACACTGCCTGGGTGGCAGAGCAAGACCCTGTCTCAAAAAATAAATTAACTAAGGCCGGGCACGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGTCGAGGCGCGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCCATCTCTACTAAAAATACAAAACTAGCCGGGTGTGGTGGCGCATGACTGTAATCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATGGCTTGAACCCGGGAGGCGGAGGTTGCGGTGAGCTGAGATCGCGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAATAAAAATAAAATAAAAATAAATTAAGTAAGTAAGTAAATAAATAAGTGGTGAAGGAAGGCCTCTTGGAGAAGGCATCATTTGAGAAAAGATTTAAAGGAGGTGAGGGCACAAGCTATGCAGACCTCTAGATAAACATTTCTAGGAAGAGGGATCAAAAATGAAAATATTCTGGGGTGTGTGTGTGCCTGTGTGTGTATGTAGTGGGTGATGGGATAAGGCCTCTCCTTCTCCTGGAGGCCACTGTGGCTGGAGCTGAGTGAAAAAGAAGAAAATGGTAGGAGATGCAGTGTAGGTGGTCTTCGGAAAAGAATGGGAAGCCAGATCCTGCGGGCCATCTGGGAGAGGATGGCTTTTGTTCTGTGGGAGATAAGGAACCACTGGAGGGCTTGGAGCAGAGGTGTGACATCGGGCTTCCATTTTTTTTTCAGTACTACTTTCACTGCTTTATTAGGAATAGATTGTAAGGGATGCAGTAGAAGCAAGAAGTCAGGTGGCTGGTTATGGGGTTATTGTCTTCTGAAAGCCACGTAAAGAAAGTGAAAGGTGATGGTGACCAGTGAAAGTGGTGAAAAATGATCAAGATTTACAGACAGTTGAAGGCAGAGCTATAGGACTTGCTGATGGATTCAGTGTGATGTGAGAGAGAGGAGTTAAGGCTCTCTCCAGGTTTTTGGCCTCAGCTAAGTAAGAAATTGGCCTCACCTGACAAGGAAAACAGTGAATGGAGCATGTTTTGTTGGGAGATGGGCTTGGGGGTGGAGGGTAGGAACTTGGTTTTAGACCTGTTAAATTTAAGATTCTTTAAGACATTGAAGTGGCGAGGCTAAGTTAGGTAATTTAATATAGGACTCTGGAGTTCAGTTGAGTAAAACATATAAAGTCCTGAAACTGGACAACATACCAAGGAAGTGAATGTAAATTTAAAAGACAGAGAGAGGCCCAGAGACTGAACCTTGGGGAGACTAAATATTTAAAAGTCAGAAGATAAGATGAATGCAAACAGTGAGGTGAGGTAGGAAGAAAACCAGGGGAGTGTGGTGGCCTGGGAGCCAAGTAAAGTGCTTCGAAGAGGAGAGAGTGACCAGCTAAGTCAGTGCTGCCCAGACCTAAAAACATGAGGACTGAGAAACAAATGCTGGATTTAGCAACAGTAAAGTCACTGTTGGCCCCAACAGAGATGATAATGAATGGTTTATATTTGGAAGACAGTAAGTTAGCAAGAGTAGGTTTATACTGAGAAATAGTGGAAGATCTGGATAAAGGGAGGCCAGAAAATGGAATGCTTTAGGTGCCAAATTGGAGAGTTTGGCCTTTGCCTTATAGAAAAATTACAAATAAAGGTATTTATATGGGACAAGAATAAAGCCAGTGTTTTTGAAAGTTTGCCTGATAGTAGTGGATGAGGAGAGGAGGGTCTTGATGCAGTAAGACCAGTCAGGAGTTTGTTCTAAAATTGAAGCTTATCAGGAGGGTAAAAACAAAGATGGAGGAAAATGAATAGATGTAGGATGACTGATAGAACATAGAGAATGAGAGAACAGACACCTAAAATGATTCCGATGCTGCCTGAGAGAAGGATGGTACCAGCAGCCATCTCTGGGCTTCAGGTTAATATGAACTAGCTTTAGAGATGGGCTGTCCTTGGAAAGTTTGAGACACAGGAATTGTCCCCAGGTATGCAAAGCTGAAATAAGTTTTAGGGATCAGGAATATTTGTTGGACATATCGGAATCTCATACTAAGTCTGGGATATAAAGGCTGGAGAAAGAGATACACTAAAGCACAGAGGCCATTCTTCGTGGGGAAAGAGATTGCGGGAGCCCTGGGAGATTCTGTGATGGGGCTATGATCTAGATCCTTCACAGGTCAGGCCCAGCAGAGGGAGCATTCTCACAGGTGATACAATTATTACAATTATGAAAGATAGGCAAGACAGTTGTAAACAACTCTCCCCTCCTTAGGGAAAAAAAATGGATCTGCTGGCTTTTAGAGGAAGTCAGTAAGATTTAGGGAATGAGAAAATCAAAACCTGATGTATTAATCATTTTTCAATTTGTTTTGGTAGTTCTACCCTAGAACATGTAAAAGTTGTAGAACTTTAGAATAAGAAAAGAATGTACAGATAATTGAACTATTTACTACTCTTTTACAGGTAATGAAATTGAGGCTCTAAGAGCTTCAGTGCTATTTAAGAAGTCACTCTTCTAGTTCATTTCAGCTTGACAGATGTTTATTGAACTCCTATTTGCCAAGTACTGTGCAAGGTGCTGAGAATACAAAGGTGAATAAATGACAAGAGAGGTTATTAGGCTGCAGATCATAGAAGACCTTATAGGCCATCATAAGGATTCAGGTCCTTATGATAAAAGGATTGGGAAGCCTTTGATGTTTGGATTGTTTGTTTGTTTGTTTTGTTTGTTTGTTTTTTTGAGAGGGAGTCTGGCTTGTTGCCCAGGCTGGAGTGCAGTGGCACAATCTCTGCTCACTGCAACCTCCACCTCCCTGGGTTCAAGTGATTCTTCTGCTTCAGCCTCCTGAGTGGCTAGGTCTACAGGTGCCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGAGGTTTCACCATGCTCGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCTACCTCGGCCTCCCAAAGTGCTGGGCTTACAGGCTTGAGCCACCGTGCCCGGCCATTGAAGTGTTTTAATGGGGAGGGCTATGAGATGGCATGATCAGGTTTGTGACTCCAAAAGATCATTTGAATCTATTTCTTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGCCTTGCTTTGTCACCCAGGCTGGAGTGTACTGGTGCAATCTTGGTTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTACCTCAGCCTCTCGAGTAGCTGGGATTACGGGCACGCGCCACCATGCCCAGCTAATTTGCTGATTTTTGGGTATTTTTAGTAAAGATGGGGTTTCTCCATGTTGCCCAGGCTGGTCTTGATCTCCTGACCTCAGGATCAGATCAAGTGATCTGCCTGTCCTGGCCTCCCAAAGTGCTGGGATTACAGCTATGAGCCACCACGCCCCGCCTTTGACTCTATTTCTGAGAATAATCAGGAGAGGAGCAAAAGATATGGATTGGAGAGATATTTAGAAGTAAAATTGACAGGACTTGGTTATTGATTGACTTTGGGATCCAAGAAAGGGAGAAGTCAGGATTGACCCCTAGGTTTCTGGAGTGGATTTTACTGAGATAATTATCTTTTTTTTTTGGACCTACATTACATTTCAGATTACTTTCAGATCTCTACCTAGAAACATCAAGAAGGCAATGAAATAGACAAGATTATGAATACACTAGGTGTGAATTAGACCATATAGAGGGCCCTATATGAAGTGAGAACAAAATGCCTAAGAAAGAGCTCCACAAATTTTAATGACCAGATAGGGGAGGAGCCTGCAGAGAAGACCAAGAAAGAGCAACCAGAATTAGGAGTAGGCGGCTCTAGGCACACTGCCTAGGAGTCAGCCCTGCTCCCTGGGGAGCCACTCTGGAAATTAATAATAATAATAAGCAGAATTAGGAATAAAACCAGGATATTGTAGTGTTATAGCAGCCAAGGAAAGAGAGGACAGTCAGATGTTGCAGAGAGGTCATTAAGATGAAGACTGAAAAATGTCTGCTGGATTTAACAAAATAGAAGTTTGCAGAGTGATAGGTAGGGAAAACCAGAGGAAGTGGGTTGAAAAATGAGTAAGAGGAGGCTGGGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGAATCACCTGAGATCAGGAGTTTGAGACCAGCCTGGCCAACATGATGAAACTCCGTCTCTACTAAAAATACAAAAATTAGCTGGCTGTGGTGGTGCGTGCCTGTAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATTGCTGAGCCCAGGAGGCGGAGGTTGCAGTGAGCCAAGATTGCACCACTGCACTCCAGCCTGAGTGACAGATCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAGTAGGAAGAGAGGATATAAAGATGATAAGTATGGACAGCTCTTGAGAAATGTTACTGTGAAGGGGAGGAGAGATAAGTAGAGGGTGTGTGTGTGTGTGTGTGTGTGCATGTGTAGGAGTGATTTGAATGTTTAAAAGGATTCAGTTGAGAAAAAGAAATGGTATGCAGGACTGAGAAAAATTGTAAGAGATGGAATTTAGAAACATTTAGGTACAGTAGACTTAGAGAAGAAAAATAGTTGAAAGGTATGAGAAGAGGATATGCAAATGTAGACAGGTTTTTGTTTTGGGTTTTTTCTTTGTTTGTTTGTTTGTTTGTTTGATTCCTTGTTTTTGAGACAGGGTCTCTCTATGTTGACCAGGCCAGAGTGCAGTGGCGCCATCATGGCTCACTGCAACCTCGACCTCTTGGGCTCAAGCGATCATCCCATCTCAGCCTCCTGAGTAGCTGGAACTACAGGCTCGAGCCACCACACCCGGCTAATTTTTAAATTTTTTGTAGAGACGAGGTCTCACTGTGTTGCCCAGGCTGGTCTCAAACTTCTGGGCTCAAGCAGTCCTCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCGCTGCCCCTGGCCTACATAGGTTTTTATGTTTGATGGCTGAAGGAAGGAACAAATGGTAGGTGGAAACAAACACATCTGTGAATGAAGAAATTTAAATCAAGACAAATAACAGCACTGGTCCTCAATGAGGACAAAGTCCTTAACATAACTTATATATAATTTTATATATAAAATATTTATAAGATAAAAGGGTCTAAACTCTTTTATATAAATATGAAATAAGATTACATATGTTTGTGTATATATATATATAAATAATACAAAGACCTGTTGATATAAGGTCCTTAAATAATTTAGAGAAGAGGTACTTCTAAATTTCTAGATAATACCAAAATGTTTTAGTACTACTCTGGAGATCAAGGTGAACTCTCCAGGTTGATTGGTGAAGAGGCCAAGTGTATTTCATTTTAGACATTTTAGACATGTTTGAGAAAAAGACATTTGGAGAAAAAATTTCACACCATATTTATAAGATGAAAGAGTCTAACTATTAGCAATGTCTCAGTAAAGGGACCTGAGAGTTGTATATTCTTTGCCAGGAATGTCCAACACTTTGGACACTTTGGCAAAGAGACCAACTAAGTACATCCTCAGGAAGAAGCTGAGGCAGAAAATATCAAACAGCTTCTGACTGGTTTAAAATATATACGTATATTTAAATCCCAAGGTGTCTTCACACATTAAACAGTCATCCCTCAGTAACCATGGGGGATTGGTTCTAGGATCTCCCAAGGATACCACAATTCAAAGATGCTCAAGTCCCTGATATAAAATGCTATAGTATTTGCATATAACCTATGCACATCCTCTGTATGCTTTAAATCATCTCTAGATTACTTATAATACCTAACATAATGTAAATGCTACATAAGTAGTTGTTATATTTTATTGCTTAGGGAATAATGACAAGAAAAAAAGTTGGTACGTGTTCAGTACAGATGGAGGTTGAATCTACAGATGCAGAGCCCATGGATATGGAAGGCCAGCTGTACTATGTTGAAATATGACTCCTCAAGAGAAACAGCGGAGCAGGAACATGTTCAAAGAAAGGACAACTAAGGCTGGGCTCAGTGGCTCATGCCTGTTATCCCAGCACTTTGGGAGGCCAAGGCAGGAGGATAGCTTGGGCTCAGAAGTTTGAGATGAGACCAGCCTGGACAACATAGTGAGACCCTGCTTCTAACAAATATTAGCCAGTCATGATGGTGCACACCTGTGGTCCCAGCGATTCAGAAGGCTGAGGTGGGAGAATCACTTGAGCCCAGGAGATAAGGCTGCAGTGAGCCATGGTTGCACCATGGCTCACTGCAGCCTGGGTGACAGAGTAACCCTGTCTCAAAGACCAAAAAAAAAAAAAAGGAAAAATTATTTATTTCCCTGGAAGTAAGTTTGGGAGATGAACTCAGTTTGTGAATGACCACAGCATATGGGATTGGAACTTCAGCAGGAAGGGTGGTGTCATTGTAAGGAGCCTGGCCTGTGTTCCCCAGTCAAACCAAGTTAACGCCCTTGGATATTCGGCCTTGGTTCTTGGTCCTGGTCCAGCGGCCTCAGGCCTGAACAATGCCAGAGTCTTTCTCAAAGAGAGCATCCAGGAAAAAAAGACACAGTAGCCTCCCTAGGCCTGACTCAGGCTAGTTCTGCCGCCTAGCCTGGTCAGTCTGGCAATCTTAACAATCCTAACGATGCTCCCCTTAGCCCTCCACTGAGGTTTAGCACTAACATCTGGACTCAGGAGTCCTTACTTGCCATCTGCCCTAGCTAATTTCTGAGGGTGCTGGCATGGGGGCACCGTCCTGAGTCCACGGCCTTCACTTCTGCTCACCCACCTGGTCATGTGCTGAAGAGGCCAAGCAGCTATGAAAGCTTGGGTCTCAGCCAGGTGCGGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCCAAGACGGGTGGATCACAAGGTCAGGAGTTCGAGACCAGCCTAGCCAACATAGTGAAACCCCATCTCTACTAAAAATACAAAAAAAAGAAAAAAGAAAGCTCGGGTCTCAGGAGTGTCTGCTGTTATAATATCCTGCCACCAGGAAGCCTTCGGACTGCTAGAAGAGAAATCTTGCCCCTGGTCCTAGTTGCACCAGCTTTTCCACTTGGTTCTACACTAACCCTGACTACTGTTGTCTTATCCTCACAGAAAGTTGAGGAAGCGAGCGGCCAAGGTCTCAGCCCGACACCCCAAGCCCCTTGGAAGGTATGGGGCAAGAGCCCCGGGACCTCCTGCTCGCCCTGCGGCCCCAGGAGGTGGATGGATGGATGGCAGCCATCCATGTCCATCCCAGAACCCAAGCTGATGGATTAGGGATGTGAGGAAAATGGCTTTTCCTGCAGGGAGGTGAAGGGAGCAGGCATGGGGATGGGCAAGCTTTGATCTTAGGGAACACAAGGAGGAAGTAATGTAGGAGTGGCTGAGAAGCCTCCCATCTTTACACCTACCCCAAATAGCTTGGATTCCAGCCTCAGCCACCTTCATTCTTCCTCCTTCCTGCCCCCTCCATCACCTCCCTTAGTTCACCCACATTCCCATTCTCTCCCCTCTCCACCTTTCCTCTTCCCTTCTCCCCTTCCCAACTCCCCCACCTGGATTGACATCGCTAGATTTCCCATTACTGTTGCTGAATCCAGAGAGCAGCATGAGTTCCTGAAATGCAGTTCAATGGTGTTCAGCAGACGGTGGATGCGGAAAATCTTCATTTTTCCCATCCCCATGCTGCCCACAAAGGGTCTTTCCCAGAAACAGAAAAATAACCCTGTACCTTTCCTGCGCCACATATGTAACCACTACCTCTACCAACTTCCTTCTCCTTTTTGCGGACCAATCACCAAGCTTAAAGTCAAACCCAAACCCCGAGTGGTCAGGGGGCCACACAAGAGGTAAATAAAATTCAGGTTGGGTGGAAAGGAGAGGGAGCATGGAGTTACTCGGCTGTGGCCAGGGAGGGAGGGGGTCCAGGAGGCCTTTGTGGCTGAAAGAGCTGACCAAGAGGAGGAGCAGCAGCAGCTCTTAGAAATCACCTTCCAGGGCATTTACTGAAGTGTTACGCAAGACTGGTCCTTACCTTGGTCTCAGGAATGATGCTTGTCCTAGGATTTGTTTTTTCACTCACTGACTACCTCGTTCCACATGTTTACTTATCTTCCCCTGCTGAGTTCCAGGAGACAACATGGTGCTTTTCTCTTTCAGACGCCATACTTGCGTCTCCTGTAAGAGGTTACATTTGCCTAAAGGATCAGTGTTCCCAAATCAAATGCTTTATTTGATTAGTTGTTAAAAATAAGTGCTACCAGCTTACTCGAGATGGAGGGAAACTCAGCGTCCCCTTTGGAACCTTTACCAGGAATGCAGTCAGATTGACAGCCCCTGCCTCTCTGGCTCATTTTCCACAATTAGGCTCCCAGTTCCCTAATTTTCCTCCTGGGCTCCTTTAGAACTCGAAGTGGGAAGCTTCCAACCCCTGTAATTACATCTAACTTGTCTTCAAAAGGCAGTTTGCACATTAAAAGTCTCCCTGATAACTTCAAGAGGGACTGAAGTATCGATAATTCATCCCTTTCTCCCCTCCTGTTCTCAACAAGTTCTAGTCTCACCCAGTGGTCCCCTCATAGCCCTCATTCCCCAGCTTCTCTGGTGGTTTCAAAGGATCTCAGAAATTTGGGGATGTTCTTGTAGTGCCCTTCTAGCTTAGGGTCATCTTTGCCCAACATGGCCACACTCTAGCCTTCCCTGACCTGCACATTAAAGTACACACTGCCATTTTTATTTTGTTCATTGTAGACAACGGGAATGAGGATGTTTAGAAGATAGATGTATTTTTCCTGTGATGGGCTCCTTGACTTTTACTTTCAGCCAAACAGGACTGTGGGAGAGTGCCTGATCTCTTAGATCTTCAGGATCCATTTATCCTGAGCTTCCAAAGGTATTCTGTAAAGTCTCCAGGCTTCCTTTGTCTGTTTTGTGTATAAACTTTTCCTCCTCCTGTGTCTTCCTAGCCAATGGCTTCAAGTCATCATATTCCATCCTTCCTCTGACATCAAGTGATAGGGCACATTATTGCAATAATGCATGACTACATCAGCCTCACAGGCCCGTTCCACCAGCACCAGACCTCATTTTCTTCCCTTTCTCTGCGGGCAGAGTGTACTTCACTCTGGCACGTGCCTCACTGCAGCCTCTCATTCTACTGGTATCGATAAAGAAGTCCCCCCATTCTCTCAAACATCTCGGCAGCATTTCCAAGCCTTAGCATCTATAGTTCAGTCCCATTATCCTATTCAGATGGCTTTGGGACACTGTTACGTTGAAATTGCAGAAGCATGGACTGCCTTTTTAAAGACTTACACAGCACAGGTCCTGGGATGTCTTTGCCATTTTGTTGTTCACATCCATCTCCTTTCTCTGGTCATTTATTCCCTCAAACTTTGACCTGTCCTGCATTTATACATCTTCATTCTTGCATATGCCAGTCCCAGTTTTTCTTGCGTCTACCTGCTGGTCTGTTCTTGCTGCATCTGCCCCTCCTAATCTGTCCTGCAGAGTCTCTGGCCTCTGCGGAGCTATGGAGATGGGAGACTTCCTTAGTCCTTTGCATCCTGACTCATTCAGTTATTCCAGTCTCAGCATCACAGAAGGACTTGCTCGCCCTGGCTTTTCAGGCTTCCTGTGTCAGCCACTCCCTCCTGGCCATTTCTTCCAACTGGAAAGTCCTGGTTTCCCCTTCCCTGAGGCCTTAGCCTCAGCCTCCTTTAGGGCCAGCAGCCTGAAACCACTTGGAACAGTTTCTTCCAGGCAAGTCGAGACTAGCCATCCTTCTCTTAAGGTTGTTCTACTGCAGGAGGTCCCCAAGGCCCCTCCTATCTGGGTAGTTGAGGCTCCCTCAGCCTGGAAACTCAGCAATCCCCATGTATCTCCCGAGGGAAACATGGAAGGGGGAAGAAGAGGAGATAAATGGTCACAAAAGGGTGGGGGGCATGGTGGAGGCATGAAGTGGGAGGATGTTTGTGGGGCCAAGAGGCAGGAGCATTGTTTTACCCTACTGCACCTCACTCCTGTCCCCCTAG
Seq C2 exon
GCTGCTAGCCCAACGGCAGCAACACTCCTTTGGTCTGCATGGGGTGGCGTGCGTGGGCACGGAGGCCCACCTCTCCCTCTGTTCCCTGGAGTTCTATCGTGCCAATGACACCGCCAGGTGCCCTGGGGGGGGCCCTGCAGTGGTGAGCTGTGTGCCAGGCCCTGTCTACGCGGCATCCAGTGGCCAGAAGAAGCAACAACAGTCGAAGCCTCAGGGGGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000115318:ENST00000264094:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.025 A=NA C2=0.174
Domain overlap (PFAM):
C1:
PF0053013=SRCR=PU(48.5=68.1)
A:
NA
C2:
PF0053013=SRCR=PD(50.5=68.9)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains