HsaINT1027311 @ hg38
Intron Retention
Gene
ENSG00000182378 | PLCXD1
Description
phosphatidylinositol specific phospholipase C X domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23148]
Coordinates
chrX:293035-303353:+
Coord C1 exon
chrX:293035-293218
Coord A exon
chrX:293219-299096
Coord C2 exon
chrX:299097-303353
Length
5878 bp
Sequences
Splice sites
5' ss Seq
CAGGTACCA
5' ss Score
7.88
3' ss Seq
CCCCACCCTCACCGTTGCAGGAG
3' ss Score
7.95
Exon sequences
Seq C1 exon
GAGGTGCCGACACTGCGGCAGCTGTGGTCCCGGGGCCAACAGGTCATCGTCTCCTATGAAGACGAGAGCTCCTTGCGCCGGCACCACGAGCTGTGGCCAGGAGTCCCCTACTGGTGGGGAAACAGGGTGAAGACCGAGGCCCTCATCCGATACCTGGAGACCATGAAGAGCTGCGGCCGCCCAG
Seq A exon
GTACCAGGTCGCCCCTCGTGGGGGTAGATTCCACACAGCCTCCCGTGACGCCCTGCGGCAGGCCGGGTCCACATGGACTTGCCTTCACTTTTACGTGAAAACAATTTAAAAGGAATCCATGAGCTGGGCGTGGTAATCCCTGTACCTGTAATCCCAGCACTTCGGGAGGCCGAGGCGGGTGGATCACCTGAGGTCGGGAGTTTGAGACCAGCCTGGCCAACATAGTGAGACCCCAACTTTACTAGAAATAAAACTTAGCGGCCGGGCGCAGTGGTTCATGCCTGTCATCCTAGCACTTTGGGAGGCTGAGGCGGGCAGATCACCTGAGGTCGGGAGTTCGAGACCGGCCTGACCAATGTGATGAAACCCTGTCTCTACTTAAGAAGCACCCAGGGAGAAAGCAGTCCATGTACATTGGCGGGGGGAGGGATCAACAAGGTGTGGTCCATCCACGCGGTGGAATATTACACAGCCATGAAAAAGAACGAGGCTCTGACAAGGATGCAGCGGGCACAAACCTTAAGACATCACGCTCAGTGAGAGAAGCCAGACACAAAAGGACACGTAGTGTGTGAATCCATTTACAGGAAATGCCCAGAACATGCCAATCCAGAGACAGAAAGAGGATTTGTGGTTGCCGGGGGCTGCGGAGGGGAAATGAGGACTGACTGCTTCATGGAAACAGGGTCTCTCCTTTTAGGACGATGAGAATGTTCTGGAACTAGGGAGAGGTCGGAGTTGCACAACGTGAATCCACTTTATTTTTTTTAGTTAATTCTTTGATTAGAGAAGGGGTCTCACTGTGTTGGCCAGGCTGGTCTCAAACTCCTGGTGTCAGCCAGGTGCGGTGGCTCACACCTGTGATCACAGCACTTTGGGAGGCCAAGGTGGGTGGATCACCTGAGGTCAGGAGTTTGGAGACCAGCCTGGCCAACATGGCGAAACCTCTTCTCTAGCAAAAATACAAAAATTAGCGGGCACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTCGGGAGGCCGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCCGGCTAACATGGAGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAATCCCAGCTACTCCGGAGGCTGAGGTAGGAGAATGGTGTGAACTCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCACTGAACTCCAGCCTGGGCGACAGAGTGGAACTCTGTCTCAAAAAAAAAAAAAAAATAGGCACCTGTAATCCCATCTACTTGGGAGGCTGAGGCAGGAGAAATGCTTGAATCCAGGAGGCGGAGGTTGCTGTGATCCATGGTCGCGCCACTGCACTCCAGCCTGGGCGACAGGAGCAAGACTCCATCTCAAAACAAAACAAAAAAGAGAAAAATTAGCCAGGCATGGTGATGCGCGCCTATAATCCCAGCTACTCAGGAGGCTGAGGCAGGGGAATCACTTGAACCAGGAAGGCGGAGGTTGCAGTGGGCCGAGATCGAGCCAGTGTACTCCAGCCTGGGCAACAGAGCGAGACTCTGTCTCAAAACAAAACAAGACAAAATCAAACTTCTGGGGTCAAGCGATCTGCTTGAACCACCATTCCCAGCCGAGTTGTGCAATTTAAAATCGTGAATTTCGGTGCAGTGGCTCACGCCTGTAATCCCACCACTTTGGGAGGCCGAGGCAGGTGGATTAATTGAGATCAGGAGTTTGCGACCAGTCTGGTGAAACCCCATCTCTAGTAAAAATACAAAAAGATTTAGCTGGGCGTGGTTGTGTGCACCTGTAATCCCAGCTCCTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGGGCGGAGGCTGCCGTGAGCCGAAATCGCGCCACAGCACTCCAGCCTGGGCAACAGAGCGAGACTCCATCTTGGGAAAAAAAAAAAAAGGTAACTTTTTTGTACGTGAATTTCACCACAATTTTTGTAAAAAAGCCACCGACGGGGTGTGAGGTGCAGACAGCGTCGGCAGCCACGGCCCCGTGTCCTCCGGAGGCAGGAGCCTGAGGGAGGGAGGGAGGAAGGTCCTCCCCGCGGGGACGGTGGCAGGTGGGGCCGTCTCGGTCCTGCAGCCTGCGGCTGGGTTCTCTCAAGGTGATCTTCACGGCCGCGAGGGCTGCTTCCCACAGGGGCAGCATGAAACCCAGTCACGGGCCGGGCAAAGGAGCAGGTTTTTTCAACTTGGTCTCTTGCCCTCACACAGGAACGAGGTTTAGAGACTTCAGAAATGTCTTTTTTTTTTTTTTGAGGTGGAGTCTCACTCTTGTTGCCCCGGTCGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACCTCCGTCTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCACCACACCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGTCGGGCTGGTCTCGAACTCCTGACCTCATGATCTGCCCGTCTCAGTCTCCCAAAGTGCTGGGATGACAGGCGTGAGCCACGGTGCCAGGCGGAAAATTTTTTTGTTTGTGTGTTTGTTTTTTGAGACAGAGTTTTGCTCTTGTTGCCCAGGCTAGAGTGCAATGGCGCAATCTTGGCTCACTGCAGCCTTCGCCTCCTGGGTTCGAGCAATTCTCCCGCCTCAGCCTCCCACCACGCCCGGCTAATTTTTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGATCAGGCTGGTCTCGAACTCCCGACCTCAGGTGATCTGCCCGCCTTGGCCTCCCAAAGTGGTGGGATTACAGGCTTGAGCCACTGTGCCCGGCCTTTTTTTGTTTGTTTTGTTTTGTTTTTGAGACAGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTCACTGCAACCTCCACCTCCTGGATTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACGGGCACGTACCACCATGCTGAGCTAATTTTTGGATGTGTTTTTACTAGAGAAAGGGTTTCAGCGTGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCATGATCCACCGGCCTCAACCTCTCAACGTGCTGGGATGACAGGCATGAGCCACCGTGCCCAGCCTAGAAATACGTGTTAAAAACCACTGAGAGAACTTGGCCATAAACGTCTGTTGCCTTTGCCGTCTCTGGCTGTGGAATCAGTCCAGCTGGTCAACACAGGGGCACTGGAACCTACCTCTGGGGGAGCTTCTTCAAATATGGCTTGCAGGAGATTCCGGCTCAGCAGATGTAGGTGGAGCCCCCAAATTTGCATTTCTAACTATTGCAGGGACCCCACTTTGAGAATCACTGGTCAACGTCAACCCTCTCTATAAGCCTCATAAGAGATGGCACAGACTTAGTGCCCAAGACAACAGCATTCTTCCTGTCTATCACATGGGGGATAAGAATGTGGACAAGTTTGGGGCCATATTATTCTGTCTCCCACATGGGATTAGGACGTGGACATCTTTGGGGCCATTATCCTGTCTACCTCATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTCCCACATGGGGATTAGGACGTGGACATCTTTGGGGCCATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATCCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTCCCACATGGGGATCAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGCCATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATCAGGACGTGGACATCTTTGGGGACATTATCCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGCCATTATTCTGTCTCCCACATGGGGATTAGGACGTGGACATCTTTGGGGCCATTATTCTGTCTCCCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTCCCACATGGGGATTAGGACGTGGACATCTTTGGGGCTGTTATTCTGTCTCCCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGCTGTTATTCTGTCTCCCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTCCCACATGGGGATTAGGACGTGGACATCTTTGGGGCTGTTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGCCATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTCCCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTCCCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTCCCACATGGGGATTAGGACGTGGACATCTTTGGGGCCATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTCCCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGCCATTATTCTGTCTATCACATGGGGATTACGACGTGGACATCTTTGGGGACATTATTCTGTCTCCCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATCAGGACGTGGACATCTTTGGGGCCATTATCCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGACATTATTCTGTCTATCACATGGGGATTAGGACGTGGACATCTTTGGGGCCATTATTCTGTCTATCACATGGGGATTAGGATGTGGACATCTTTGGGGACATTATTCTGTCTCCCACACGGTGTTACGACGTGAGCATCTTTGGGGTTGTCTACTGCCCACCACGCTTTATAAGCAAAGCTCACCCAATTTCCTTGTTGGACATGGTGCTTTCAACTCTTAATTCCTGAGATGCGAACCTCTAATAATGTGACTAGGAGGGAGAAACAGGCGGGTGAGGCCCGTGACCGTGTAACCTCTCCCCACCCTCACCGTTGCAG
Seq C2 exon
GAGGGTTGTTCGTGGCCGGCATCAACCTCACGGAGAACCTGCAGTACGTTCTGGCGCACCCGTCCGAGTCCCTGGAGAAGATGACGCTGCCCAACCTTCCGCGGCTGAGCGCGTGGGTCCGAGAGCAGTGCCCGGGGCCGGGTTCACGGTGCACCAACATCATCGCGGGGGACTTCATCGGCGCAGACGGCTTCGTCAGTGACGTCATCGCGCTCAATCAGAAGCTGCTGTGGTGCTGACGGGACCCTTCTGAAGTTCGGGACGCGGCGGCTGCAGTTTCACCCCCGAATTTCCAAGTATTGTGACTTTGTTTGGGCCAAATGTTGGTGATCATAGGACCGATGATAATACGTTTTCATTTTCTTTAAAATAGAGATGGGGTGGCTGGGCGTGGTGACTTCGCCTGTCTTCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCATGAGGTCAGGAGCTTGAGAGCAGCCTGACCAACATGGTGAAATCCCATCTCTACTAAAAATACAAAACTTAGCTGGGTGTGTGGCAGGCGCCTGTAGTCCCAGTTACTCGGGAGGCTCAGGCAGGAGAACTGCTTGAAGCCGGGAGATGGAGGTTGCATTGAGCTGACATCGTGCCACTGCACTCCAGTCTGAATGATAGACCGAGACTCCATCTCAAAAGAAAAAAAAACAGCCGAGTGTGCAGTGACTCACGCCTGTCATCCCAGCACTTTGGGAGGCGAAGGCGGGTGGAACATGAGGTCAGGAGTTCGAGACCAGCCTGACCAACATGGTGAAACCCCGTCTCTATTAAAAACACAAAAACTACCTGGGTGCGTGATGGGCACCTGTAGTGCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGGTTGCATTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGATGGGGTCTCTCTATGTTGGCCAGGTTGGTCTTGAACTCCTGGCCTCAAGTGATCCTCCCACCTCAGCCTCCCAGAGTGCTGGGATGACAGTCAAGAACCACCATGGCAGCCCATAATATGTTTTCTTATTTCTGTATTCTCCTTGCTGTGGCGTCTGGAGCCCTTACAGACCCAGGGAGACACTATCCTCCCACAGCTCACTAATTACTAAACACAGTGACAGCCCACTTAGGAGCCGGCCTCCCCTGTCAGCCAACCCCTCAGCTAGTTCTCACACCAAGCCTATAGATATATATGTGTGTGTATATATGTGTGTTTATGTGTCTGTGTGTATATATGTGTATATATCGGTGTGTATATATGTATGTATGTTTATACATGTGTATATGTGTGTGTGTGTGTGTATATGTGTGTATGTGTGTATATATGTATATGTGTGCATATGTGTATACGTGTATGCATACATGTATATGTGTATGCATGTATATGTGTATGTGTACATGTATATGTGTTTATACATGTATATGTGTGTATGCGTGTATACGTGTATGTATACATGTATATGTGTGTATGCGTGTATATACACACGTATACATATATACGTGCGTGTGTATGTGTATATATATATATGTGTATATATATATTTTTTGAGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAACGGCGAGATCTCGGCTCACCGCAACCTCCGCCTCCCTGGTTCAAGCAATTCTCCTGCCTCCGCCTCCCGAGTAGCTGGGATGACAGGCATGTGCCACCACACCCGACTAATTTCATATATTTAGTAGAGACGGGGTTTCTCCGCGTTGGTCAGGCCGTTCTCAAACTTCTGACCTCAGGTGATCTGCCCGCCTCGACCTCCCAAAGTGCTGGGATGACAGGCATGAGCCACTGTGCCCAGCCGCCGATATTTCTTTAAATTATGTTTAGGGACAGGGTCTTTTTCTGTCACCCAGGCTGGAGGGCAGTGGTACAGTCATAGCTCACTGCAGCCTCAACCTCCTGGGCTCAAGCGATCCTCTCAGCTCAGCCTCCCGTGTAGCTGGGGCTCCAGGGACACACCCCCACTGCTGGCTAATTTTTGTATTTTTGGTAGAGTCAGGGTTTCACCACATGGCACAGTCTGGTCTCAAATTCCTGGGCTCCAGTGATCCTCCCACCTTAGCTTCCAGAGTGGCCAGGATCACAGGCAGGCACCACCATGCCCAGGTAATTTTATTTTTTTGTAGAGACGTGGTCTGGCTATGTTGTCCAGGGTGGTCTCAAACTCCTGGGCTCAACTGATCCTCCCACCTCAACCTCTGCCATAGCCAGGACCTCAGGTGTCAGCCACCACACCCACAGCTAATTTTTTTTGTAGAGATGGGGTCTGGCTCTGTTGCTCAGGCTGGTGTGTAGTAGGGGCACAGTCATAGCTCACTGTAACCTTCAACGCCTGGGCTGAAGCAATTCTCCCGCCTCAGCTTCCCAAGTAACTGGGAGTATAGGTGTACACCACCATGCCCAGCTAATTATTTAGTAGTAGTAGGAGGAGTATTATGTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAGTCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCAATTCTTGTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCACCGCGCCTGGCTAACTTTTGTATTTTTAGCAGAGATGGGGTTTCACCATGTTGCCCAGGCTGGTCTTGAACTCCCGACCTCAGGTGATCCATCCGCATTGGCCTCCCAAAGTGCTGGGATCACAGGCGTGAGCCACCGCACCTGGCCTCAAGCCAGTATTTCCCTGGCCCTAAATCATTCCTGGCTGGGTCCCAGCCCAGTAGAGCCAGCCCCCCAGCCCGGAGTGCTACTGAAGTGTTCAAAAGTTGTCAATCCTCAGCCGTTCCCTAGTCCTGTTGCCCGGTTCTGCCGAAGCCCCTTGAAGGCTGTGGCCTGGGCTGTTCCCTCATTCATTCCTGCCTCCCGAGCCAAACCCAGGTATCCGCTTGTGCCCTGCGTGGTGTGGCAGCGTCTTCTCTCGGGAAGGGTCAGGAGTAATTTCTTCTTTCAGTGGCCTCTCTGTGCTAGTCCCGGTCACCTCCGTGAATTAAAGTCCTACAGGTACAAGGGAGACCCCCCCCCCACGGAAGGCGCCCCCAGTCCGTGTGGGAGACTCGCACACCGGTTTTCTGCACAGGTTTCTTTCTGCCTCTGAAGCGTGAACGGTCCTAGTTTCAGACGCAGATCCTGCAAATACTTTTTTTTGTTTTTTTGAGATGGATTTTCCCTCTTGTTGTTCAGGCTGGAGTGCAATGGCACGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGGAGCTGAGATTACAGGCGCGTGCCACCGTGCCTGGTTAATTTTGTATTTGTATTTTTATTTATGTTTTGAGACGGAGTTTCGCTCTCGTTGCCGAGGCTGGAGTGTAGTAGTGTGATCCTGGCTCACTGCAACCTCCACCTCCCGGGTTCCAGCAAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTGCAGGCGCCCGCCACCACGCCCGGATAATTTTTGTGTGTTTAGCAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGATCTCCTGACCTCAGGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATGACAGGCGTGAGCCACCGCGCCCGGCCTATACCTCATTTTCTACATGTCGCTTGTTGGAGCTGCTGGTTCAAGTTCCCAGCCAGCCAATGGATGCCAGCACCATTTTTACTCCCCTTTCCCAAGCAAATCGTGCATTTTTGTCTAACGAGAGACATCAGTTTCTCAGGATGATCCTCAAGAACGTTATGGAGTCCATGTTGCAATAGGTTCTCTTTGGGACCTAATGACTCATTTTCCAAAAATCCGCTTCTACTTTTGGTACCCGGTTGCTACGGTGAAATGAAGGTGCCCCGCATCCAGAAAGACGCACTCCTGGACCACAACCGGCGGCTACCTCAGCCCCACGGCTCTGCAGGATCAGGGCTCGGGCAGGCCCCGCGGAGATGAAGAATTTGCAGGGAGCCTCCCTGACTTCCGTCGGCTGTGAATCCTTGTCTGTCAGGGGCGTATCCACAAAATCACCGAATTCATACAGATCGTTTAAATAAATGAACATCATTAAAGTC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000182378:ENST00000399012:7
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0038814=PI-PLC-X=PD(9.5=25.8)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains