MmuALTD0011689-1/2 @ mm9

Alternative 5'ss

Gene

ENSMUSG00000075376 | Rc3h2

Description

ring finger and CCCH-type zinc finger domains 2 [Source:MGI Symbol;Acc:MGI:2442789]

Coordinates

chr2:37225589-37232310:-

Coord C1 exon

chr2:37232181-37232310

Coord A exon

NA

Coord C2 exon

chr2:37225589-37230948

Length

0 bp

Sequences

Splice sites

5' ss Seq

TAGGTGAAG

5' ss Score

3.29

3' ss Seq

TCACTGTCATTTTCTCTCAGGGA

3' ss Score

9.62

Exon sequences

Seq C1 exon

GAAATTTTGGACATACAACTTGGTATCAGTTCTCAAAATGACCAGTTGCTCAATGGAACAGCAGTGGAAAATGGTCATCCAGCCCAGCAGCACCAGAAGGACCCAGGAAAGCCGAAGAGACAGAGTTTAG

Seq A exon

NA

Seq C2 exon

GGAGGAGCAAAAACCAATTCTGCCGGTAACATCTTGCTTTAGCCAGCCACGTCCAATGTCTATTAGCAGTGCAAGCTGCCTCCCCATCACCACATCTGTCAGTGTTGGCAACCTCATTCTGAAAACTCACGTTATGTCTGAAGATAAAAACGACTTTTTAAAACCTATTGCAAATGGGAAGATGGTTAACAGCTGAAAGGAGGCTCAGCTTTCAAATCTGTGACCACACCATGGAAGCATTTACACTAGCTTTTTATATATATAATATATATTATATAATGTATATTTTTTTTAAAAAAAAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCCTCTTGCATTAGCATTATGAAAAAAAAGAAAATTTACTTTACTAGGGTAATGTTCACTTTCCAGAAATTATTGGAATTTGGACAACATTTAACTTAAGCTTCAAGCAGCTTTTTATGAGTTTGTAGCAATCCGGTGCAGTAACTGAGC

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000075376-27-31,28-31-1/2

Average complexity

Alt5

Mappability confidence:

NA

Protein Impact

Protein isoform when splice site is used (No Ref, Alt. Stop)

No structure available

Features